RNA–Protein interactions for RNA: ENST00000534234.5

COPB1-211, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 5

Gene COPB1, Length 1,584 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-211ENST00000534234 GRIA4P48058 902 aa9.18□□□□□ -0.94
COPB1-211ENST00000534234 PLK1P53350 603 aa9.18□□□□□ -0.94
COPB1-211ENST00000534234 ZNF177Q13360 481 aaPredicted RBP9.18□□□□□ -0.94
COPB1-211ENST00000534234 KCNJ12Q14500 433 aa9.18□□□□□ -0.94
COPB1-211ENST00000534234 SUZ12Q15022 739 aaKnown RBP9.18□□□□□ -0.94
COPB1-211ENST00000534234 ZNF423Q2M1K9 1284 aa9.18□□□□□ -0.94
COPB1-211ENST00000534234 CT47A1Q5JQC4 288 aaPredicted RBP9.18□□□□□ -0.94
COPB1-211ENST00000534234 KIAA0895LQ68EN5 471 aa9.18□□□□□ -0.94
COPB1-211ENST00000534234 NCEH1Q6PIU2 408 aa9.18□□□□□ -0.94
COPB1-211ENST00000534234 LRSAM1Q6UWE0 723 aa9.18□□□□□ -0.94
COPB1-211ENST00000534234 DBX2Q6ZNG2 339 aa9.18□□□□□ -0.94
COPB1-211ENST00000534234 ERICH1Q86X53 443 aa9.18□□□□□ -0.94
COPB1-211ENST00000534234 STK40Q8N2I9 435 aa9.18□□□□□ -0.94
COPB1-211ENST00000534234 RHBDD1Q8TEB9 315 aa9.18□□□□□ -0.94
COPB1-211ENST00000534234 GATA6Q92908 595 aa9.18□□□□□ -0.94
COPB1-211ENST00000534234 C18orf8Q96DM3 657 aa9.18□□□□□ -0.94
COPB1-211ENST00000534234 FEM1AQ9BSK4 669 aa9.18□□□□□ -0.94
COPB1-211ENST00000534234 WDCPQ9H6R7 721 aa9.18□□□□□ -0.94
COPB1-211ENST00000534234 RRN3Q9NYV6 651 aa9.18□□□□□ -0.94
COPB1-211ENST00000534234 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.18□□□□□ -0.941e-13■■□□□ 14.1
COPB1-211ENST00000534234 ADAMTS1Q9UHI8 967 aa9.18□□□□□ -0.94
COPB1-211ENST00000534234 KLK13Q9UKR3 277 aa9.18□□□□□ -0.94
COPB1-211ENST00000534234 PCOLCE2Q9UKZ9 415 aa9.18□□□□□ -0.94
COPB1-211ENST00000534234 FNDC3AQ9Y2H6 1198 aaKnown RBP9.18□□□□□ -0.94
COPB1-211ENST00000534234 MSRB2Q9Y3D2 182 aa9.18□□□□□ -0.94
COPB1-211ENST00000534234 NEUROG3Q9Y4Z2 214 aa9.18□□□□□ -0.94
COPB1-211ENST00000534234 SNX11Q9Y5W9 270 aa9.18□□□□□ -0.94
COPB1-211ENST00000534234 FHOD1Q9Y613 1164 aa9.18□□□□□ -0.94
COPB1-211ENST00000534234 HS3ST4Q9Y661 456 aa9.18□□□□□ -0.94
COPB1-211ENST00000534234 NUP205Q92621 2012 aa9.18□□□□□ -0.94
COPB1-211ENST00000534234 A0A1W2PPC4 97 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 LRRC72A6NJI9 287 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 CBFA2T3O75081 653 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 CLDN11O75508 207 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 DAB1O75553 588 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 ADCY5O95622 1261 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 ADH1BP00325 375 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 F9P00740 461 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 IL1BP01584 269 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 FTH1P19P0C7X4 201 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 UCHL3P15374 230 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 VAV1P15498 845 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 GOT1P17174 413 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 C5AR1P21730 350 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 EEF1GP26641 437 aaKnown RBP9.17□□□□□ -0.94
COPB1-211ENST00000534234 CDH5P33151 784 aaPredicted RBP9.17□□□□□ -0.94
COPB1-211ENST00000534234 GGCXP38435 758 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 GABRB2P47870 512 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 PSMD8P48556 350 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 CXCR3P49682 368 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 RACK1P63244 317 aaKnown RBP9.17□□□□□ -0.94
COPB1-211ENST00000534234 CENPCQ03188 943 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 ELAVL3Q14576 367 aaKnown RBP9.17□□□□□ -0.94
COPB1-211ENST00000534234 ACCSLQ4AC99 568 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 TCP11X2Q5H9J9 407 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 TAF3Q5VWG9 929 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 CXorf57Q6NSI4 855 aaKnown RBP9.17□□□□□ -0.94
COPB1-211ENST00000534234 SND1Q7KZF4 910 aaKnown RBP eCLIP9.17□□□□□ -0.941e-6■■□□□ 13.2
COPB1-211ENST00000534234 RAB44Q7Z6P3 723 aaPredicted RBP9.17□□□□□ -0.94
COPB1-211ENST00000534234 ADAT2Q7Z6V5 191 aaKnown RBP9.17□□□□□ -0.94
COPB1-211ENST00000534234 C14orf80Q86SX3 495 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 AADATQ8N5Z0 425 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 PNPLA1Q8N8W4 532 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 KDF1Q8NAX2 398 aaPredicted RBP9.17□□□□□ -0.94
COPB1-211ENST00000534234 OR52K2Q8NGK3 314 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 OR2T34Q8NGX1 318 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 OR14C36Q8NHC7 312 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 NT5C3BQ969T7 300 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 ALG14Q96F25 216 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 NPY6RQ99463 290 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 ORAI3Q9BRQ5 295 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 NAA15Q9BXJ9 866 aaKnown RBP9.17□□□□□ -0.94
COPB1-211ENST00000534234 TMEM121BQ9BXQ6 578 aaPredicted RBP9.17□□□□□ -0.94
COPB1-211ENST00000534234 STK33Q9BYT3 514 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 TKTL2Q9H0I9 626 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 PIGVQ9NUD9 493 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 FZD4Q9ULV1 537 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 STAP1Q9ULZ2 295 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 APOBEC2Q9Y235 224 aaKnown RBP9.17□□□□□ -0.94
COPB1-211ENST00000534234 PCDHGB2Q9Y5G2 931 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 PLXND1Q9Y4D7 1925 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 CEP295Q9C0D2 2601 aa9.17□□□□□ -0.94
COPB1-211ENST00000534234 FAM170AA1A519 330 aa9.16□□□□□ -0.94
COPB1-211ENST00000534234 FAM221BA6H8Z2 402 aa9.16□□□□□ -0.94
COPB1-211ENST00000534234 TFE3P19532 575 aaPredicted RBP9.16□□□□□ -0.94
COPB1-211ENST00000534234 SULT1E1P49888 294 aa9.16□□□□□ -0.94
COPB1-211ENST00000534234 IRAK1P51617 712 aa9.16□□□□□ -0.94
COPB1-211ENST00000534234 CDH4P55283 916 aa9.16□□□□□ -0.94
COPB1-211ENST00000534234 C21orf59P57076 290 aa9.16□□□□□ -0.94
COPB1-211ENST00000534234 DEUP1Q05D60 604 aa9.16□□□□□ -0.94
COPB1-211ENST00000534234 DLG2Q15700 870 aa9.16□□□□□ -0.94
COPB1-211ENST00000534234 C5orf22Q49AR2 442 aa9.16□□□□□ -0.94
COPB1-211ENST00000534234 C2CD6Q53TS8 623 aa9.16□□□□□ -0.94
COPB1-211ENST00000534234 KCNT1Q5JUK3 1230 aa9.16□□□□□ -0.94
COPB1-211ENST00000534234 BRMS1LQ5PSV4 323 aa9.16□□□□□ -0.94
COPB1-211ENST00000534234 OTUD1Q5VV17 481 aaPredicted RBP9.16□□□□□ -0.94
COPB1-211ENST00000534234 LAYNQ6UX15 382 aa9.16□□□□□ -0.94
COPB1-211ENST00000534234 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.16□□□□□ -0.94
COPB1-211ENST00000534234 GLRX5Q86SX6 157 aa9.16□□□□□ -0.94
COPB1-211ENST00000534234 SLCO6A1Q86UG4 719 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms