RNA–Protein interactions for RNA: ENST00000534112.1

SSH3-211, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 4

Gene SSH3, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-211ENST00000534112 TBC1D3EA0A087X179 549 aa22.02■■□□□ 1.12
SSH3-211ENST00000534112 TBC1D3KA0A087X1G2 549 aa22.02■■□□□ 1.12
SSH3-211ENST00000534112 TBC1D3FA6NER0 549 aaPredicted RBP22.02■■□□□ 1.12
SSH3-211ENST00000534112 TBC1D3LB9A6J9 549 aa22.02■■□□□ 1.12
SSH3-211ENST00000534112 SART1O43290 800 aaKnown RBP22.02■■□□□ 1.12
SSH3-211ENST00000534112 LATO43561 262 aa22.02■■□□□ 1.12
SSH3-211ENST00000534112 TBC1D3HP0C7X1 549 aa22.02■■□□□ 1.12
SSH3-211ENST00000534112 MZF1P28698 734 aaPredicted RBP22.02■■□□□ 1.12
SSH3-211ENST00000534112 EIF2S3P41091 472 aaKnown RBP22.02■■□□□ 1.12
SSH3-211ENST00000534112 GPD2P43304 727 aa22.02■■□□□ 1.12
SSH3-211ENST00000534112 STK19P49842 368 aaPredicted RBP22.02■■□□□ 1.12
SSH3-211ENST00000534112 PPP2CBP62714 309 aa22.02■■□□□ 1.12
SSH3-211ENST00000534112 PPP2CAP67775 309 aa22.02■■□□□ 1.12
SSH3-211ENST00000534112 ELAVL3Q14576 367 aaKnown RBP22.02■■□□□ 1.12
SSH3-211ENST00000534112 ZC3H12AQ5D1E8 599 aaKnown RBP22.02■■□□□ 1.12
SSH3-211ENST00000534112 HES3Q5TGS1 186 aa22.02■■□□□ 1.12
SSH3-211ENST00000534112 RAP1GAP2Q684P5 730 aa22.02■■□□□ 1.12
SSH3-211ENST00000534112 TBC1D3GQ6DHY5 549 aa22.02■■□□□ 1.12
SSH3-211ENST00000534112 TBC1D3CQ6IPX1 549 aa22.02■■□□□ 1.12
SSH3-211ENST00000534112 FBXL19Q6PCT2 694 aa22.02■■□□□ 1.12
SSH3-211ENST00000534112 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP22.02■■□□□ 1.12
SSH3-211ENST00000534112 BEND5Q7L4P6 421 aa22.02■■□□□ 1.12
SSH3-211ENST00000534112 RRAGAQ7L523 313 aa22.02■■□□□ 1.12
SSH3-211ENST00000534112 TBC1D3Q8IZP1 549 aaPredicted RBP22.02■■□□□ 1.12
SSH3-211ENST00000534112 LMO3Q8TAP4 145 aa22.02■■□□□ 1.12
SSH3-211ENST00000534112 UBL7Q96S82 380 aaPredicted RBP22.02■■□□□ 1.12
SSH3-211ENST00000534112 ST7Q9NRC1 585 aa22.02■■□□□ 1.12
SSH3-211ENST00000534112 TJP2Q9UDY2 1190 aa22.02■■□□□ 1.12
SSH3-211ENST00000534112 COL5A1P20908 1838 aaPredicted RBP22.01■■□□□ 1.11
SSH3-211ENST00000534112 TLX3O43711 291 aaPredicted RBP22.01■■□□□ 1.11
SSH3-211ENST00000534112 APOEP02649 317 aa22.01■■□□□ 1.11
SSH3-211ENST00000534112 VAV1P15498 845 aa22.01■■□□□ 1.11
SSH3-211ENST00000534112 TACR2P21452 398 aa22.01■■□□□ 1.11
SSH3-211ENST00000534112 DRD3P35462 400 aa22.01■■□□□ 1.11
SSH3-211ENST00000534112 NNMTP40261 264 aa22.01■■□□□ 1.11
SSH3-211ENST00000534112 SFMBT2Q5VUG0 894 aa22.01■■□□□ 1.11
SSH3-211ENST00000534112 NAPEPLDQ6IQ20 393 aa22.01■■□□□ 1.11
SSH3-211ENST00000534112 CHSY1Q86X52 802 aa22.01■■□□□ 1.11
SSH3-211ENST00000534112 SPATS2Q86XZ4 545 aaKnown RBP22.01■■□□□ 1.11
SSH3-211ENST00000534112 FMR1NBQ8N0W7 255 aaPredicted RBP22.01■■□□□ 1.11
SSH3-211ENST00000534112 MFSD2AQ8NA29 543 aa22.01■■□□□ 1.11
SSH3-211ENST00000534112 NRSN2Q9GZP1 204 aa22.01■■□□□ 1.11
SSH3-211ENST00000534112 ARHGAP20Q9P2F6 1191 aa22.01■■□□□ 1.11
SSH3-211ENST00000534112 PLXNA2O75051 1894 aa22■■□□□ 1.11
SSH3-211ENST00000534112 CAPN9O14815 690 aa22■■□□□ 1.11
SSH3-211ENST00000534112 ACADSBP45954 432 aa22■■□□□ 1.11
SSH3-211ENST00000534112 NUMBP49757 651 aa22■■□□□ 1.11
SSH3-211ENST00000534112 METAP1P53582 386 aa22■■□□□ 1.11
SSH3-211ENST00000534112 NUCB2P80303 420 aa22■■□□□ 1.11
SSH3-211ENST00000534112 CETN1Q12798 172 aa22■■□□□ 1.11
SSH3-211ENST00000534112 RTP5Q14D33 572 aa22■■□□□ 1.11
SSH3-211ENST00000534112 LRRC69Q6ZNQ3 347 aa22■■□□□ 1.11
SSH3-211ENST00000534112 KANSL1Q7Z3B3 1105 aa22■■□□□ 1.11
SSH3-211ENST00000534112 PRPF39Q86UA1 669 aaKnown RBP22■■□□□ 1.11
SSH3-211ENST00000534112 OXR1Q8N573 874 aa22■■□□□ 1.11
SSH3-211ENST00000534112 SPATA20Q8TB22 786 aa22■■□□□ 1.11
SSH3-211ENST00000534112 FRS2Q8WU20 508 aa22■■□□□ 1.11
SSH3-211ENST00000534112 ERCC4Q92889 916 aaPredicted RBP22■■□□□ 1.11
SSH3-211ENST00000534112 BTN2A3PQ96KV6 586 aa22■■□□□ 1.11
SSH3-211ENST00000534112 TRIM62Q9BVG3 475 aa22■■□□□ 1.11
SSH3-211ENST00000534112 KALRNO60229 2985 aa21.99■■□□□ 1.11
SSH3-211ENST00000534112 SMC2O95347 1197 aa21.99■■□□□ 1.11
SSH3-211ENST00000534112 CKMT2P17540 419 aa21.99■■□□□ 1.11
SSH3-211ENST00000534112 GCNT1Q02742 428 aa21.99■■□□□ 1.11
SSH3-211ENST00000534112 SULT2A1Q06520 285 aa21.99■■□□□ 1.11
SSH3-211ENST00000534112 ILKQ13418 452 aa21.99■■□□□ 1.11
SSH3-211ENST00000534112 SLC12A1Q13621 1099 aa21.99■■□□□ 1.11
SSH3-211ENST00000534112 ARHGEF19Q8IW93 802 aa21.99■■□□□ 1.11
SSH3-211ENST00000534112 FAM131CQ96AQ9 280 aa21.99■■□□□ 1.11
SSH3-211ENST00000534112 CEP63Q96MT8 703 aa21.99■■□□□ 1.11
SSH3-211ENST00000534112 SPAG5Q96R06 1193 aa21.99■■□□□ 1.11
SSH3-211ENST00000534112 SLC4A5Q9BY07 1137 aa21.99■■□□□ 1.11
SSH3-211ENST00000534112 KDM4CQ9H3R0 1056 aa21.99■■□□□ 1.11
SSH3-211ENST00000534112 PRORYQ9H606 182 aa21.99■■□□□ 1.11
SSH3-211ENST00000534112 CYTH4Q9UIA0 394 aa21.99■■□□□ 1.11
SSH3-211ENST00000534112 F5H5T6 163 aa21.98■■□□□ 1.11
SSH3-211ENST00000534112 P4HA2O15460 535 aa21.98■■□□□ 1.11
SSH3-211ENST00000534112 RRP8O43159 456 aaKnown RBP21.98■■□□□ 1.11
SSH3-211ENST00000534112 RTN2O75298 545 aa21.98■■□□□ 1.11
SSH3-211ENST00000534112 TRUB2O95900 331 aaKnown RBP21.98■■□□□ 1.11
SSH3-211ENST00000534112 IGLV3-25P01717 112 aa21.98■■□□□ 1.11
SSH3-211ENST00000534112 PDGFRAP16234 1089 aa21.98■■□□□ 1.11
SSH3-211ENST00000534112 MAT2AP31153 395 aaKnown RBP21.98■■□□□ 1.11
SSH3-211ENST00000534112 CCDC40Q4G0X9 1142 aa21.98■■□□□ 1.11
SSH3-211ENST00000534112 DENND1BQ6P3S1 775 aa21.98■■□□□ 1.11
SSH3-211ENST00000534112 IQCHQ86VS3 1027 aa21.98■■□□□ 1.11
SSH3-211ENST00000534112 STK32AQ8WU08 396 aa21.98■■□□□ 1.11
SSH3-211ENST00000534112 SMARCE1Q969G3 411 aa21.98■■□□□ 1.11
SSH3-211ENST00000534112 GTPBP4Q9BZE4 634 aaKnown RBP21.98■■□□□ 1.11
SSH3-211ENST00000534112 POPDC2Q9HBU9 364 aa21.98■■□□□ 1.11
SSH3-211ENST00000534112 RAI2Q9Y5P3 530 aa21.98■■□□□ 1.11
SSH3-211ENST00000534112 FLNBO75369 2602 aaKnown RBP21.98■■□□□ 1.11
SSH3-211ENST00000534112 KCNU1A8MYU2 1149 aa21.97■■□□□ 1.11
SSH3-211ENST00000534112 PSMA7O14818 248 aa21.97■■□□□ 1.11
SSH3-211ENST00000534112 SLC7A4O43246 635 aa21.97■■□□□ 1.11
SSH3-211ENST00000534112 PRB1P04280 392 aa21.97■■□□□ 1.11
SSH3-211ENST00000534112 NUDT1P36639 197 aa21.97■■□□□ 1.11
SSH3-211ENST00000534112 PLK1P53350 603 aa21.97■■□□□ 1.11
SSH3-211ENST00000534112 YWHAZP63104 245 aaKnown RBP21.97■■□□□ 1.11
SSH3-211ENST00000534112 OVGP1Q12889 678 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms