RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 PIK3CAP42336 1068 aa12.73□□□□□ -0.37
SVIP-205ENST00000533774 STK19P49842 368 aaPredicted RBP12.73□□□□□ -0.37
SVIP-205ENST00000533774 ZNF445P59923 1031 aa12.73□□□□□ -0.37
SVIP-205ENST00000533774 ST8SIA6P61647 398 aa12.73□□□□□ -0.37
SVIP-205ENST00000533774 RPS24P62847 133 aaKnown RBP12.73□□□□□ -0.37
SVIP-205ENST00000533774 SFSWAPQ12872 951 aaKnown RBP12.73□□□□□ -0.37
SVIP-205ENST00000533774 KNOP1Q1ED39 458 aaKnown RBP12.73□□□□□ -0.37
SVIP-205ENST00000533774 PITRM1Q5JRX3 1037 aa12.73□□□□□ -0.37
SVIP-205ENST00000533774 MPP7Q5T2T1 576 aa12.73□□□□□ -0.37
SVIP-205ENST00000533774 CNNM4Q6P4Q7 775 aa12.73□□□□□ -0.37
SVIP-205ENST00000533774 ZNF574Q6ZN55 896 aaPredicted RBP12.73□□□□□ -0.37
SVIP-205ENST00000533774 ATG14Q6ZNE5 492 aa12.73□□□□□ -0.37
SVIP-205ENST00000533774 PRPF39Q86UA1 669 aaKnown RBP12.73□□□□□ -0.37
SVIP-205ENST00000533774 MFN1Q8IWA4 741 aa12.73□□□□□ -0.37
SVIP-205ENST00000533774 EXTL1Q92935 676 aa12.73□□□□□ -0.37
SVIP-205ENST00000533774 RPL10LQ96L21 214 aaKnown RBP12.73□□□□□ -0.37
SVIP-205ENST00000533774 MYOCQ99972 504 aa12.73□□□□□ -0.37
SVIP-205ENST00000533774 UBXN6Q9BZV1 441 aa12.73□□□□□ -0.37
SVIP-205ENST00000533774 SARDHQ9UL12 918 aa12.73□□□□□ -0.37
SVIP-205ENST00000533774 SMC3Q9UQE7 1217 aa12.73□□□□□ -0.37
SVIP-205ENST00000533774 CACNA1DQ01668 2161 aa12.72□□□□□ -0.37
SVIP-205ENST00000533774 PLRG1O43660 514 aaKnown RBP12.72□□□□□ -0.37
SVIP-205ENST00000533774 NEBLO76041 1014 aa12.72□□□□□ -0.37
SVIP-205ENST00000533774 ADH1BP00325 375 aa12.72□□□□□ -0.37
SVIP-205ENST00000533774 IL1BP01584 269 aa12.72□□□□□ -0.37
SVIP-205ENST00000533774 IGLV3-27P01718 113 aa12.72□□□□□ -0.37
SVIP-205ENST00000533774 ASLP04424 464 aa12.72□□□□□ -0.37
SVIP-205ENST00000533774 GP1BAP07359 652 aa12.72□□□□□ -0.37
SVIP-205ENST00000533774 RBMS1P29558 406 aaKnown RBP12.72□□□□□ -0.37
SVIP-205ENST00000533774 KCNMA1Q12791 1236 aa12.72□□□□□ -0.37
SVIP-205ENST00000533774 OVGP1Q12889 678 aa12.72□□□□□ -0.37
SVIP-205ENST00000533774 STAT4Q14765 748 aa12.72□□□□□ -0.37
SVIP-205ENST00000533774 BSPRYQ5W0U4 402 aa12.72□□□□□ -0.37
SVIP-205ENST00000533774 CLEC14AQ86T13 490 aa12.72□□□□□ -0.37
SVIP-205ENST00000533774 TRIM69Q86WT6 500 aa12.72□□□□□ -0.37
SVIP-205ENST00000533774 APCDD1Q8J025 514 aa12.72□□□□□ -0.37
SVIP-205ENST00000533774 KDM1BQ8NB78 822 aa12.72□□□□□ -0.37
SVIP-205ENST00000533774 SLC4A11Q8NBS3 891 aa12.72□□□□□ -0.37
SVIP-205ENST00000533774 TMEM145Q8NBT3 493 aa12.72□□□□□ -0.37
SVIP-205ENST00000533774 IFI44Q8TCB0 444 aa12.72□□□□□ -0.37
SVIP-205ENST00000533774 MAPK15Q8TD08 544 aa12.72□□□□□ -0.37
SVIP-205ENST00000533774 TAS1R2Q8TE23 839 aa12.72□□□□□ -0.37
SVIP-205ENST00000533774 KLK6Q92876 244 aa12.72□□□□□ -0.37
SVIP-205ENST00000533774 KLHDC7BQ96G42 594 aa12.72□□□□□ -0.37
SVIP-205ENST00000533774 HEXIM2Q96MH2 286 aaKnown RBP12.72□□□□□ -0.37
SVIP-205ENST00000533774 NOX5Q96PH1 765 aa12.72□□□□□ -0.37
SVIP-205ENST00000533774 C7orf25Q9BPX7 421 aa12.72□□□□□ -0.37
SVIP-205ENST00000533774 BACH2Q9BYV9 841 aa12.72□□□□□ -0.37
SVIP-205ENST00000533774 CYP3A43Q9HB55 503 aa12.72□□□□□ -0.37
SVIP-205ENST00000533774 OLA1Q9NTK5 396 aaKnown RBP12.72□□□□□ -0.37
SVIP-205ENST00000533774 KLHL11Q9NVR0 708 aa12.72□□□□□ -0.37
SVIP-205ENST00000533774 CGNQ9P2M7 1197 aaKnown RBP12.72□□□□□ -0.37
SVIP-205ENST00000533774 SPTBN1Q01082 2364 aaKnown RBP12.71□□□□□ -0.37
SVIP-205ENST00000533774 K7ESM1 405 aa12.71□□□□□ -0.37
SVIP-205ENST00000533774 NOBOXO60393 691 aa12.71□□□□□ -0.37
SVIP-205ENST00000533774 ACSL4O60488 711 aa12.71□□□□□ -0.37
SVIP-205ENST00000533774 MAGEC1O60732 1142 aa12.71□□□□□ -0.37
SVIP-205ENST00000533774 AFPP02771 609 aaKnown RBP12.71□□□□□ -0.37
SVIP-205ENST00000533774 SRPRAP08240 638 aaKnown RBP12.71□□□□□ -0.37
SVIP-205ENST00000533774 FAM87AP0C7U9 286 aa12.71□□□□□ -0.37
SVIP-205ENST00000533774 THEGLP0DJG4 465 aa12.71□□□□□ -0.37
SVIP-205ENST00000533774 GP1BBP13224 206 aa12.71□□□□□ -0.37
SVIP-205ENST00000533774 RAD23BP54727 409 aa12.71□□□□□ -0.37
SVIP-205ENST00000533774 TAS2R38P59533 333 aa12.71□□□□□ -0.37
SVIP-205ENST00000533774 CNTN1Q12860 1018 aa12.71□□□□□ -0.37
SVIP-205ENST00000533774 SLC39A14Q15043 492 aa12.71□□□□□ -0.37
SVIP-205ENST00000533774 ZNF542PQ5EBM4 170 aa12.71□□□□□ -0.37
SVIP-205ENST00000533774 AGBL4Q5VU57 503 aa12.71□□□□□ -0.37
SVIP-205ENST00000533774 FOXR1Q6PIV2 292 aa12.71□□□□□ -0.37
SVIP-205ENST00000533774 CRTC1Q6UUV9 634 aa12.71□□□□□ -0.37
SVIP-205ENST00000533774 UNC13DQ70J99 1090 aa12.71□□□□□ -0.37
SVIP-205ENST00000533774 SLC22A18ASQ8N1D0 253 aa12.71□□□□□ -0.37
SVIP-205ENST00000533774 CFAP52Q8N1V2 620 aa12.71□□□□□ -0.37
SVIP-205ENST00000533774 CARNMT1Q8N4J0 409 aa12.71□□□□□ -0.37
SVIP-205ENST00000533774 OR13H1Q8NG92 308 aa12.71□□□□□ -0.37
SVIP-205ENST00000533774 TATDN2Q93075 761 aa12.71□□□□□ -0.37
SVIP-205ENST00000533774 ARRDC3Q96B67 414 aa12.71□□□□□ -0.37
SVIP-205ENST00000533774 USP28Q96RU2 1077 aa12.71□□□□□ -0.37
SVIP-205ENST00000533774 CCNL2Q96S94 520 aaPredicted RBP12.71□□□□□ -0.37
SVIP-205ENST00000533774 ABCG4Q9H172 646 aa12.71□□□□□ -0.37
SVIP-205ENST00000533774 BLZF1Q9H2G9 400 aa12.71□□□□□ -0.37
SVIP-205ENST00000533774 FZD3Q9NPG1 666 aa12.71□□□□□ -0.37
SVIP-205ENST00000533774 NLGN3Q9NZ94 848 aa12.71□□□□□ -0.37
SVIP-205ENST00000533774 TPX2Q9ULW0 747 aaKnown RBP12.71□□□□□ -0.37
SVIP-205ENST00000533774 DMTF1Q9Y222 760 aa12.71□□□□□ -0.37
SVIP-205ENST00000533774 PCDHGA8Q9Y5G5 932 aa12.71□□□□□ -0.37
SVIP-205ENST00000533774 VPS37CA5D8V6 355 aaPredicted RBP12.7□□□□□ -0.38
SVIP-205ENST00000533774 PRAMEF26H0Y7S4 382 aa12.7□□□□□ -0.38
SVIP-205ENST00000533774 SLC31A1O15431 190 aa12.7□□□□□ -0.38
SVIP-205ENST00000533774 PRLRP16471 622 aa12.7□□□□□ -0.38
SVIP-205ENST00000533774 PDX1P52945 283 aa12.7□□□□□ -0.38
SVIP-205ENST00000533774 ECT2LQ008S8 904 aa12.7□□□□□ -0.38
SVIP-205ENST00000533774 TLE1Q04724 770 aa12.7□□□□□ -0.38
SVIP-205ENST00000533774 PPP3CAQ08209 521 aa12.7□□□□□ -0.38
SVIP-205ENST00000533774 ADIGQ0VDE8 80 aa12.7□□□□□ -0.38
SVIP-205ENST00000533774 UBAP2LQ14157 1087 aaKnown RBP12.7□□□□□ -0.38
SVIP-205ENST00000533774 DRAP1Q14919 205 aaPredicted RBP12.7□□□□□ -0.38
SVIP-205ENST00000533774 TGIF1Q15583 401 aa12.7□□□□□ -0.38
SVIP-205ENST00000533774 CDKN3Q16667 212 aa12.7□□□□□ -0.38
SVIP-205ENST00000533774 ARHGAP17Q68EM7 881 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms