RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 CADM4Q8NFZ8 388 aa10.76□□□□□ -0.69
CAPN1-225ENST00000533704 NEK11Q8NG66 645 aa10.76□□□□□ -0.69
CAPN1-225ENST00000533704 NPY6RQ99463 290 aa10.76□□□□□ -0.69
CAPN1-225ENST00000533704 C11orf70Q9BRQ4 267 aa10.76□□□□□ -0.69
CAPN1-225ENST00000533704 ADAM33Q9BZ11 813 aa10.76□□□□□ -0.69
CAPN1-225ENST00000533704 BTBD1Q9H0C5 482 aa10.76□□□□□ -0.69
CAPN1-225ENST00000533704 TKTL2Q9H0I9 626 aa10.76□□□□□ -0.69
CAPN1-225ENST00000533704 RSPH9Q9H1X1 276 aaPredicted RBP10.76□□□□□ -0.69
CAPN1-225ENST00000533704 METTL5Q9NRN9 209 aaKnown RBP10.76□□□□□ -0.69
CAPN1-225ENST00000533704 TMPRSS4Q9NRS4 437 aa10.76□□□□□ -0.69
CAPN1-225ENST00000533704 SEPT11Q9NVA2 429 aaKnown RBP10.76□□□□□ -0.69
CAPN1-225ENST00000533704 FBXL12Q9NXK8 326 aa10.76□□□□□ -0.69
CAPN1-225ENST00000533704 RRN3Q9NYV6 651 aa10.76□□□□□ -0.69
CAPN1-225ENST00000533704 NCKAP1Q9Y2A7 1128 aa10.76□□□□□ -0.69
CAPN1-225ENST00000533704 LGALS16A8MUM7 142 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 MID1O15344 667 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 BCAT2O15382 392 aaPredicted RBP10.75□□□□□ -0.69
CAPN1-225ENST00000533704 BNIP3LO60238 219 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 FLT3P36888 993 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 GABRB2P47870 512 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 CXCR3P49682 368 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 OXCT1P55809 520 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 ATP11AP98196 1134 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 CDR2Q01850 454 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 ZBTB16Q05516 673 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 TYRO3Q06418 890 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 FOXC1Q12948 553 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 GRIK2Q13002 908 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 MTA1Q13330 715 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 SLC12A1Q13621 1099 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 CST6Q15828 149 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 ACCSLQ4AC99 568 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 C9orf64Q5T6V5 341 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 CXorf57Q6NSI4 855 aaKnown RBP10.75□□□□□ -0.69
CAPN1-225ENST00000533704 STK40Q8N2I9 435 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 EMC1Q8N766 993 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 SLC30A5Q8TAD4 765 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 DNASE2BQ8WZ79 361 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 CFAP57Q96MR6 1250 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 CNTNAP3BQ96NU0 1288 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 OMDQ99983 421 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 CNTNAP3Q9BZ76 1288 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 MUC3BQ9H195 1237 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 PABPC3Q9H361 631 aaKnown RBP10.75□□□□□ -0.69
CAPN1-225ENST00000533704 SLC32A1Q9H598 525 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 TMEM63CQ9P1W3 806 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 LIMA1Q9UHB6 759 aaKnown RBP10.75□□□□□ -0.69
CAPN1-225ENST00000533704 SLC25A13Q9UJS0 675 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 NOCTQ9UK39 431 aaKnown RBP10.75□□□□□ -0.69
CAPN1-225ENST00000533704 VPS28Q9UK41 221 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 SIK3Q9Y2K2 1263 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 PAXBP1Q9Y5B6 917 aa10.75□□□□□ -0.69
CAPN1-225ENST00000533704 CACNA1BQ00975 2339 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 SPAARA0A1B0GVQ0 90 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 A0A1W2PP55 124 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 TARSL2A2RTX5 802 aaKnown RBP10.74□□□□□ -0.69
CAPN1-225ENST00000533704 CLDN11O75508 207 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 RNASEH2AO75792 299 aaKnown RBP10.74□□□□□ -0.69
CAPN1-225ENST00000533704 CNTN5O94779 1100 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 GJB6O95452 261 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 F9P00740 461 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 IL1BP01584 269 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 RHOCP08134 193 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 VAV1P15498 845 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 CHRNB2P17787 502 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 CSRP1P21291 193 aaKnown RBP10.74□□□□□ -0.69
CAPN1-225ENST00000533704 SLC8A1P32418 973 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 RDXP35241 583 aaKnown RBP10.74□□□□□ -0.69
CAPN1-225ENST00000533704 SCNN1AP37088 669 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 JAM2P57087 298 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 FMO1Q01740 532 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 SULT2A1Q06520 285 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 SFSWAPQ12872 951 aaKnown RBP10.74□□□□□ -0.69
CAPN1-225ENST00000533704 CDO1Q16878 200 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 SLC25A52Q3SY17 297 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 ANO6Q4KMQ2 910 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 BRMS1LQ5PSV4 323 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 TRNP1Q6NT89 227 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 LRRC31Q6UY01 552 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 TFAP2DQ7Z6R9 452 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 FAM131BQ86XD5 332 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 ZNF677Q86XU0 584 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 KDM1BQ8NB78 822 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 OR52K2Q8NGK3 314 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 PPP1R9BQ96SB3 815 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 SGK2Q9HBY8 427 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 ANLNQ9NQW6 1124 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 ARHGEF38Q9NXL2 777 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 MPP6Q9NZW5 540 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 SERGEFQ9UGK8 458 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 ANGPTL2Q9UKU9 493 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.74□□□□□ -0.69
CAPN1-225ENST00000533704 CEP295Q9C0D2 2601 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 ITIH6Q6UXX5 1313 aa10.74□□□□□ -0.69
CAPN1-225ENST00000533704 A0A1B0GVT2 93 aa10.73□□□□□ -0.69
CAPN1-225ENST00000533704 I6L893 689 aaPredicted RBP10.73□□□□□ -0.69
CAPN1-225ENST00000533704 PLK4O00444 970 aa10.73□□□□□ -0.69
CAPN1-225ENST00000533704 SRGAP2O75044 1071 aa10.73□□□□□ -0.69
CAPN1-225ENST00000533704 CYP1A1P04798 512 aaPredicted RBP10.73□□□□□ -0.69
CAPN1-225ENST00000533704 ATP1A3P13637 1013 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms