RNA–Protein interactions for RNA: ENST00000533686.5

PACSIN3-210, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 3

Gene PACSIN3, Length 443 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-210ENST00000533686 SYCE1Q8N0S2 351 aa16.91■□□□□ 0.3
PACSIN3-210ENST00000533686 RTL3Q8N8U3 475 aaKnown RBP16.91■□□□□ 0.3
PACSIN3-210ENST00000533686 LRRC57Q8N9N7 239 aa16.91■□□□□ 0.3
PACSIN3-210ENST00000533686 KIAA1524Q8TCG1 905 aa16.91■□□□□ 0.3
PACSIN3-210ENST00000533686 UCMAQ8WVF2 138 aa16.91■□□□□ 0.3
PACSIN3-210ENST00000533686 UBE2Q2Q8WVN8 375 aa16.91■□□□□ 0.3
PACSIN3-210ENST00000533686 TSC1Q92574 1164 aa16.91■□□□□ 0.3
PACSIN3-210ENST00000533686 TTC17Q96AE7 1141 aa16.91■□□□□ 0.3
PACSIN3-210ENST00000533686 CWC15Q9P013 229 aaKnown RBP16.91■□□□□ 0.3
PACSIN3-210ENST00000533686 INTS6Q9UL03 887 aaKnown RBP16.91■□□□□ 0.3
PACSIN3-210ENST00000533686 GRID2IPA4D2P6 1211 aa16.9■□□□□ 0.3
PACSIN3-210ENST00000533686 CHURC1-FNTBB4DL54 471 aa16.9■□□□□ 0.3
PACSIN3-210ENST00000533686 NPC1O15118 1278 aa16.9■□□□□ 0.3
PACSIN3-210ENST00000533686 RNF40O75150 1001 aa16.9■□□□□ 0.3
PACSIN3-210ENST00000533686 DCNP07585 359 aaKnown RBP16.9■□□□□ 0.3
PACSIN3-210ENST00000533686 HNRNPLP14866 589 aaKnown RBP eCLIP16.9■□□□□ 0.3
PACSIN3-210ENST00000533686 GOT1P17174 413 aa16.9■□□□□ 0.3
PACSIN3-210ENST00000533686 CSKP41240 450 aa16.9■□□□□ 0.3
PACSIN3-210ENST00000533686 CDH6P55285 790 aa16.9■□□□□ 0.3
PACSIN3-210ENST00000533686 DPYSQ14117 519 aa16.9■□□□□ 0.3
PACSIN3-210ENST00000533686 KRT81Q14533 505 aa16.9■□□□□ 0.3
PACSIN3-210ENST00000533686 PLEKHG6Q3KR16 790 aa16.9■□□□□ 0.3
PACSIN3-210ENST00000533686 FUT11Q495W5 492 aa16.9■□□□□ 0.3
PACSIN3-210ENST00000533686 PITRM1Q5JRX3 1037 aa16.9■□□□□ 0.3
PACSIN3-210ENST00000533686 MBLAC2Q68D91 279 aa16.9■□□□□ 0.3
PACSIN3-210ENST00000533686 MAMSTRQ6ZN01 415 aa16.9■□□□□ 0.3
PACSIN3-210ENST00000533686 VSIG1Q86XK7 387 aa16.9■□□□□ 0.3
PACSIN3-210ENST00000533686 KCTD6Q8NC69 237 aa16.9■□□□□ 0.3
PACSIN3-210ENST00000533686 OR52K2Q8NGK3 314 aa16.9■□□□□ 0.3
PACSIN3-210ENST00000533686 USP33Q8TEY7 942 aa16.9■□□□□ 0.3
PACSIN3-210ENST00000533686 ALG14Q96F25 216 aa16.9■□□□□ 0.3
PACSIN3-210ENST00000533686 FEM1AQ9BSK4 669 aa16.9■□□□□ 0.3
PACSIN3-210ENST00000533686 GOLPH3Q9H4A6 298 aa16.9■□□□□ 0.3
PACSIN3-210ENST00000533686 DDX56Q9NY93 547 aaKnown RBP16.9■□□□□ 0.3
PACSIN3-210ENST00000533686 GUCA1BQ9UMX6 200 aa16.9■□□□□ 0.3
PACSIN3-210ENST00000533686 HYOU1Q9Y4L1 999 aa16.9■□□□□ 0.3
PACSIN3-210ENST00000533686 OR51B4Q9Y5P0 310 aa16.9■□□□□ 0.3
PACSIN3-210ENST00000533686 KIAA1549LQ6ZVL6 1849 aa16.9■□□□□ 0.3
PACSIN3-210ENST00000533686 ZNF487B1APH4 448 aa16.89■□□□□ 0.29
PACSIN3-210ENST00000533686 DAPK3O43293 454 aa16.89■□□□□ 0.29
PACSIN3-210ENST00000533686 ATG13O75143 517 aa16.89■□□□□ 0.29
PACSIN3-210ENST00000533686 ASLP04424 464 aa16.89■□□□□ 0.29
PACSIN3-210ENST00000533686 ATP5BP06576 529 aaKnown RBP16.89■□□□□ 0.29
PACSIN3-210ENST00000533686 ERCC2P18074 760 aa16.89■□□□□ 0.29
PACSIN3-210ENST00000533686 POLR2EP19388 210 aaKnown RBP16.89■□□□□ 0.29
PACSIN3-210ENST00000533686 IL4RP24394 825 aa16.89■□□□□ 0.29
PACSIN3-210ENST00000533686 MZF1P28698 734 aaPredicted RBP16.89■□□□□ 0.29
PACSIN3-210ENST00000533686 AVPR2P30518 371 aa16.89■□□□□ 0.29
PACSIN3-210ENST00000533686 GJC1P36383 396 aa16.89■□□□□ 0.29
PACSIN3-210ENST00000533686 SULT2A1Q06520 285 aa16.89■□□□□ 0.29
PACSIN3-210ENST00000533686 DPYSL3Q14195 570 aa16.89■□□□□ 0.29
PACSIN3-210ENST00000533686 RNF219Q5W0B1 726 aaPredicted RBP16.89■□□□□ 0.29
PACSIN3-210ENST00000533686 TRMT11Q7Z4G4 463 aaKnown RBP16.89■□□□□ 0.29
PACSIN3-210ENST00000533686 TMEM105Q8N8V8 129 aa16.89■□□□□ 0.29
PACSIN3-210ENST00000533686 CSPG4P5Q96PW8 444 aa16.89■□□□□ 0.29
PACSIN3-210ENST00000533686 ZNF670Q9BS34 389 aa16.89■□□□□ 0.29
PACSIN3-210ENST00000533686 THAP10Q9P2Z0 257 aaPredicted RBP16.89■□□□□ 0.29
PACSIN3-210ENST00000533686 HCN2Q9UL51 889 aa16.89■□□□□ 0.29
PACSIN3-210ENST00000533686 ZSCAN12O43309 604 aa16.88■□□□□ 0.29
PACSIN3-210ENST00000533686 PALMO75781 387 aa16.88■□□□□ 0.29
PACSIN3-210ENST00000533686 DLDP09622 509 aaKnown RBP16.88■□□□□ 0.29
PACSIN3-210ENST00000533686 KDELR1P24390 212 aa16.88■□□□□ 0.29
PACSIN3-210ENST00000533686 ETFBP38117 255 aa16.88■□□□□ 0.29
PACSIN3-210ENST00000533686 NUBP1P53384 320 aa16.88■□□□□ 0.29
PACSIN3-210ENST00000533686 SEC13P55735 322 aa16.88■□□□□ 0.29
PACSIN3-210ENST00000533686 YBEYP58557 167 aaPredicted RBP16.88■□□□□ 0.29
PACSIN3-210ENST00000533686 GNA12Q03113 381 aa16.88■□□□□ 0.29
PACSIN3-210ENST00000533686 GAS6Q14393 721 aa16.88■□□□□ 0.29
PACSIN3-210ENST00000533686 EMC10Q5UCC4 262 aa16.88■□□□□ 0.29
PACSIN3-210ENST00000533686 Q6ZS52 159 aa16.88■□□□□ 0.29
PACSIN3-210ENST00000533686 NT5DC3Q86UY8 548 aa16.88■□□□□ 0.29
PACSIN3-210ENST00000533686 APCDD1Q8J025 514 aa16.88■□□□□ 0.29
PACSIN3-210ENST00000533686 UMODL1-AS1Q8N2C9 162 aa16.88■□□□□ 0.29
PACSIN3-210ENST00000533686 SPEM1Q8N4L4 309 aa16.88■□□□□ 0.29
PACSIN3-210ENST00000533686 LZTR1Q8N653 840 aa16.88■□□□□ 0.29
PACSIN3-210ENST00000533686 ZNF513Q8N8E2 541 aaPredicted RBP16.88■□□□□ 0.29
PACSIN3-210ENST00000533686 KDM1BQ8NB78 822 aa16.88■□□□□ 0.29
PACSIN3-210ENST00000533686 RAPGEF5Q92565 580 aa16.88■□□□□ 0.29
PACSIN3-210ENST00000533686 FAF2Q96CS3 445 aa16.88■□□□□ 0.29
PACSIN3-210ENST00000533686 CIPCQ9C0C6 399 aa16.88■□□□□ 0.29
PACSIN3-210ENST00000533686 MUC3BQ9H195 1237 aa16.88■□□□□ 0.29
PACSIN3-210ENST00000533686 MAGEH1Q9H213 219 aa16.88■□□□□ 0.29
PACSIN3-210ENST00000533686 NDFIP2Q9NV92 336 aa16.88■□□□□ 0.29
PACSIN3-210ENST00000533686 DNAI1Q9UI46 699 aa16.88■□□□□ 0.29
PACSIN3-210ENST00000533686 AMFRQ9UKV5 643 aa16.88■□□□□ 0.29
PACSIN3-210ENST00000533686 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.88■□□□□ 0.29
PACSIN3-210ENST00000533686 PCDHA3Q9Y5H8 950 aa16.88■□□□□ 0.29
PACSIN3-210ENST00000533686 A0A0D9SEW6 157 aa16.87■□□□□ 0.29
PACSIN3-210ENST00000533686 CXorf51AA0A1B0GTR3 108 aa16.87■□□□□ 0.29
PACSIN3-210ENST00000533686 DCLK1O15075 740 aa16.87■□□□□ 0.29
PACSIN3-210ENST00000533686 RAMP2O60895 175 aa16.87■□□□□ 0.29
PACSIN3-210ENST00000533686 CD48P09326 243 aa16.87■□□□□ 0.29
PACSIN3-210ENST00000533686 CTNNA2P26232 953 aa16.87■□□□□ 0.29
PACSIN3-210ENST00000533686 CTNNA1P35221 906 aaKnown RBP16.87■□□□□ 0.29
PACSIN3-210ENST00000533686 TIE1P35590 1138 aa16.87■□□□□ 0.29
PACSIN3-210ENST00000533686 VASPP50552 380 aaPredicted RBP16.87■□□□□ 0.29
PACSIN3-210ENST00000533686 NDST2P52849 883 aa16.87■□□□□ 0.29
PACSIN3-210ENST00000533686 C2orf27AQ580R0 203 aa16.87■□□□□ 0.29
PACSIN3-210ENST00000533686 ZFYVE27Q5T4F4 411 aa16.87■□□□□ 0.29
PACSIN3-210ENST00000533686 EGFLAMQ63HQ2 1017 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms