RNA–Protein interactions for RNA: ENST00000533644.5

BBS1-223, Transcript of Bardet-Biedl syndrome 1, human

TSL 3

Gene BBS1, Length 910 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBS1-223	ENST00000533644	SUSD2	Q9UGT4	822 aa		18.22	■□□□□ 0.51
BBS1-223	ENST00000533644	SLCO3A1	Q9UIG8	710 aa		18.22	■□□□□ 0.51
BBS1-223	ENST00000533644	TBC1D30	Q9Y2I9	924 aa		18.22	■□□□□ 0.51
BBS1-223	ENST00000533644	TARSL2	A2RTX5	802 aa	Known RBP	18.21	■□□□□ 0.51
BBS1-223	ENST00000533644	METTL12	A8MUP2	240 aa		18.21	■□□□□ 0.51
BBS1-223	ENST00000533644	TTC34	A8MYJ7	566 aa		18.21	■□□□□ 0.51
BBS1-223	ENST00000533644	CLDN11	O75508	207 aa		18.21	■□□□□ 0.51
BBS1-223	ENST00000533644	ENDOD1	O94919	500 aa		18.21	■□□□□ 0.51
BBS1-223	ENST00000533644	RDX	P35241	583 aa	Known RBP	18.21	■□□□□ 0.51
BBS1-223	ENST00000533644	VASP	P50552	380 aa	Predicted RBP	18.21	■□□□□ 0.51
BBS1-223	ENST00000533644	CDH4	P55283	916 aa		18.21	■□□□□ 0.51
BBS1-223	ENST00000533644	GSC	P56915	257 aa	Predicted RBP	18.21	■□□□□ 0.51
BBS1-223	ENST00000533644	SULT2A1	Q06520	285 aa		18.21	■□□□□ 0.51
BBS1-223	ENST00000533644	TTC31	Q49AM3	519 aa	Predicted RBP	18.21	■□□□□ 0.51
BBS1-223	ENST00000533644	ARTN	Q5T4W7	220 aa		18.21	■□□□□ 0.51
BBS1-223	ENST00000533644	DAB2IP	Q5VWQ8	1189 aa		18.21	■□□□□ 0.51
BBS1-223	ENST00000533644	RNF219	Q5W0B1	726 aa	Predicted RBP	18.21	■□□□□ 0.51
BBS1-223	ENST00000533644	SLC30A5	Q8TAD4	765 aa		18.21	■□□□□ 0.51
BBS1-223	ENST00000533644	C1orf74	Q96LT6	269 aa		18.21	■□□□□ 0.51
BBS1-223	ENST00000533644	CFAP57	Q96MR6	1250 aa		18.21	■□□□□ 0.51
BBS1-223	ENST00000533644	C11orf70	Q9BRQ4	267 aa		18.21	■□□□□ 0.51
BBS1-223	ENST00000533644	SIK2	Q9H0K1	926 aa		18.21	■□□□□ 0.51
BBS1-223	ENST00000533644	METTL5	Q9NRN9	209 aa	Known RBP	18.21	■□□□□ 0.51
BBS1-223	ENST00000533644	SCML1	Q9UN30	329 aa		18.21	■□□□□ 0.51
BBS1-223	ENST00000533644	OR51B4	Q9Y5P0	310 aa		18.21	■□□□□ 0.51
BBS1-223	ENST00000533644	NYNRIN	Q9P2P1	1898 aa	Known RBP	18.2	■□□□□ 0.5
BBS1-223	ENST00000533644	IGLV3-10	A0A075B6K4	115 aa		18.2	■□□□□ 0.5
BBS1-223	ENST00000533644	ZNF559-ZNF177	A0A0A6YYI6	481 aa	Predicted RBP	18.2	■□□□□ 0.5
BBS1-223	ENST00000533644	EDDM13	A0A1B0GTR0	161 aa		18.2	■□□□□ 0.5
BBS1-223	ENST00000533644	SMTNL1	A8MU46	457 aa		18.2	■□□□□ 0.5
BBS1-223	ENST00000533644	MEI4	A8MW99	385 aa		18.2	■□□□□ 0.5
BBS1-223	ENST00000533644	DNTT	P04053	509 aa		18.2	■□□□□ 0.5
BBS1-223	ENST00000533644	ADRB1	P08588	477 aa		18.2	■□□□□ 0.5
BBS1-223	ENST00000533644	ACSL1	P33121	698 aa		18.2	■□□□□ 0.5
BBS1-223	ENST00000533644	STK19	P49842	368 aa	Predicted RBP	18.2	■□□□□ 0.5
BBS1-223	ENST00000533644	GFPT1	Q06210	699 aa	Predicted RBP	18.2	■□□□□ 0.5
BBS1-223	ENST00000533644	ZNF177	Q13360	481 aa	Predicted RBP	18.2	■□□□□ 0.5
BBS1-223	ENST00000533644	CLEC16A	Q2KHT3	1053 aa		18.2	■□□□□ 0.5
BBS1-223	ENST00000533644	USP30	Q70CQ3	517 aa		18.2	■□□□□ 0.5
BBS1-223	ENST00000533644	FAM124A	Q86V42	546 aa		18.2	■□□□□ 0.5
BBS1-223	ENST00000533644	PHF13	Q86YI8	300 aa	Predicted RBP	18.2	■□□□□ 0.5
BBS1-223	ENST00000533644	RGL4	Q8IZJ4	473 aa		18.2	■□□□□ 0.5
BBS1-223	ENST00000533644	EMC1	Q8N766	993 aa		18.2	■□□□□ 0.5
BBS1-223	ENST00000533644	RPL10L	Q96L21	214 aa	Known RBP	18.2	■□□□□ 0.5
BBS1-223	ENST00000533644	PPP1R9B	Q96SB3	815 aa		18.2	■□□□□ 0.5
BBS1-223	ENST00000533644	FEM1A	Q9BSK4	669 aa		18.2	■□□□□ 0.5
BBS1-223	ENST00000533644	PABPC3	Q9H361	631 aa	Known RBP	18.2	■□□□□ 0.5
BBS1-223	ENST00000533644	RTN4	Q9NQC3	1192 aa	Known RBP	18.2	■□□□□ 0.5
BBS1-223	ENST00000533644	FSCN3	Q9NQT6	498 aa		18.2	■□□□□ 0.5
BBS1-223	ENST00000533644	TMPRSS4	Q9NRS4	437 aa		18.2	■□□□□ 0.5
BBS1-223	ENST00000533644	SNX10	Q9Y5X0	201 aa		18.2	■□□□□ 0.5
BBS1-223	ENST00000533644	C2CD4B	A6NLJ0	364 aa		18.19	■□□□□ 0.5
BBS1-223	ENST00000533644	DRGX	A6NNA5	263 aa		18.19	■□□□□ 0.5
BBS1-223	ENST00000533644	TEX33	O43247	280 aa		18.19	■□□□□ 0.5
BBS1-223	ENST00000533644	CNTN5	O94779	1100 aa		18.19	■□□□□ 0.5
BBS1-223	ENST00000533644	GNS	P15586	552 aa		18.19	■□□□□ 0.5
BBS1-223	ENST00000533644	MAOB	P27338	520 aa		18.19	■□□□□ 0.5
BBS1-223	ENST00000533644	MAPK8	P45983	427 aa		18.19	■□□□□ 0.5
BBS1-223	ENST00000533644	NSF	P46459	744 aa	Known RBP	18.19	■□□□□ 0.5
BBS1-223	ENST00000533644	ZNF165	P49910	485 aa		18.19	■□□□□ 0.5
BBS1-223	ENST00000533644	CACNA1E	Q15878	2313 aa		18.19	■□□□□ 0.5
BBS1-223	ENST00000533644	KLHL40	Q2TBA0	621 aa		18.19	■□□□□ 0.5
BBS1-223	ENST00000533644	ALF	Q53S48	1182 aa		18.19	■□□□□ 0.5
BBS1-223	ENST00000533644	DCAF12L1	Q5VU92	463 aa		18.19	■□□□□ 0.5
BBS1-223	ENST00000533644	PTPRN2	Q92932	1015 aa		18.19	■□□□□ 0.5
BBS1-223	ENST00000533644	HAPLN3	Q96S86	360 aa		18.19	■□□□□ 0.5
BBS1-223	ENST00000533644	MYO6	Q9UM54	1294 aa		18.19	■□□□□ 0.5
BBS1-223	ENST00000533644	CFAP47	Q6ZTR5	3102 aa		18.18	■□□□□ 0.5
BBS1-223	ENST00000533644	ARHGAP33	O14559	1287 aa		18.18	■□□□□ 0.5
BBS1-223	ENST00000533644	RNASEH1	O60930	286 aa	Known RBP	18.18	■□□□□ 0.5
BBS1-223	ENST00000533644	KCNK5	O95279	499 aa		18.18	■□□□□ 0.5
BBS1-223	ENST00000533644	SEMA4F	O95754	770 aa		18.18	■□□□□ 0.5
BBS1-223	ENST00000533644	FER	P16591	822 aa		18.18	■□□□□ 0.5
BBS1-223	ENST00000533644	SDC4	P31431	198 aa		18.18	■□□□□ 0.5
BBS1-223	ENST00000533644	PTPN9	P43378	593 aa		18.18	■□□□□ 0.5
BBS1-223	ENST00000533644	ELAVL3	Q14576	367 aa	Known RBP	18.18	■□□□□ 0.5
BBS1-223	ENST00000533644	NUMA1	Q14980	2115 aa		18.18	■□□□□ 0.5
BBS1-223	ENST00000533644	IQCB1	Q15051	598 aa		18.18	■□□□□ 0.5
BBS1-223	ENST00000533644	CST6	Q15828	149 aa		18.18	■□□□□ 0.5
BBS1-223	ENST00000533644	CCDC14	Q49A88	953 aa		18.18	■□□□□ 0.5
BBS1-223	ENST00000533644	FAM131B	Q86XD5	332 aa		18.18	■□□□□ 0.5
BBS1-223	ENST00000533644	C1orf216	Q8TAB5	229 aa		18.18	■□□□□ 0.5
BBS1-223	ENST00000533644	JOSD2	Q8TAC2	188 aa		18.18	■□□□□ 0.5
BBS1-223	ENST00000533644	FRS2	Q8WU20	508 aa		18.18	■□□□□ 0.5
BBS1-223	ENST00000533644	RXFP2	Q8WXD0	754 aa		18.18	■□□□□ 0.5
BBS1-223	ENST00000533644	BAP1	Q92560	729 aa		18.18	■□□□□ 0.5
BBS1-223	ENST00000533644	FAM129B	Q96TA1	746 aa		18.18	■□□□□ 0.5
BBS1-223	ENST00000533644	AGPAT1	Q99943	283 aa		18.18	■□□□□ 0.5
BBS1-223	ENST00000533644	SYT11	Q9BT88	431 aa		18.18	■□□□□ 0.5
BBS1-223	ENST00000533644	BTBD1	Q9H0C5	482 aa		18.18	■□□□□ 0.5
BBS1-223	ENST00000533644	C6orf106	Q9H6K1	298 aa	Predicted RBP	18.18	■□□□□ 0.5
BBS1-223	ENST00000533644	SGK2	Q9HBY8	427 aa		18.18	■□□□□ 0.5
BBS1-223	ENST00000533644	ADAM22	Q9P0K1	906 aa		18.18	■□□□□ 0.5
BBS1-223	ENST00000533644	ZNF212	Q9UDV6	495 aa		18.18	■□□□□ 0.5
BBS1-223	ENST00000533644	VPS28	Q9UK41	221 aa		18.18	■□□□□ 0.5
BBS1-223	ENST00000533644	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	18.18	■□□□□ 0.5
BBS1-223	ENST00000533644		A0A1B0GTW7	788 aa		18.17	■□□□□ 0.5
BBS1-223	ENST00000533644		E9PAM4	449 aa		18.17	■□□□□ 0.5
BBS1-223	ENST00000533644	ATP9B	O43861	1147 aa		18.17	■□□□□ 0.5
BBS1-223	ENST00000533644	GJB6	O95452	261 aa		18.17	■□□□□ 0.5

Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms