RNA–Protein interactions for RNA: ENST00000533244.5

CCS-208, Transcript of copper chaperone for superoxide dismutase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCS, Length 1,430 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-208ENST00000533244 FEM1AQ9BSK4 669 aa21.04■□□□□ 0.96
CCS-208ENST00000533244 TRIM7Q9C029 511 aa21.04■□□□□ 0.96
CCS-208ENST00000533244 TRIM5Q9C035 493 aa21.04■□□□□ 0.96
CCS-208ENST00000533244 MKRN2Q9H000 416 aaKnown RBP21.04■□□□□ 0.96
CCS-208ENST00000533244 MPP6Q9NZW5 540 aa21.04■□□□□ 0.96
CCS-208ENST00000533244 OR12D3Q9UGF7 316 aa21.04■□□□□ 0.96
CCS-208ENST00000533244 RAB23Q9ULC3 237 aa21.04■□□□□ 0.96
CCS-208ENST00000533244 ERVW-1Q9UQF0 538 aa21.04■□□□□ 0.96
CCS-208ENST00000533244 SSU72P8A0A1W2PR75 194 aa21.03■□□□□ 0.96
CCS-208ENST00000533244 FAM72CH0Y354 149 aa21.03■□□□□ 0.96
CCS-208ENST00000533244 SYNCRIPO60506 623 aaKnown RBP21.03■□□□□ 0.96
CCS-208ENST00000533244 TPM1P09493 284 aa21.03■□□□□ 0.96
CCS-208ENST00000533244 EIF4A3P38919 411 aaKnown RBP21.03■□□□□ 0.96
CCS-208ENST00000533244 VASPP50552 380 aaPredicted RBP21.03■□□□□ 0.96
CCS-208ENST00000533244 ECT2LQ008S8 904 aa21.03■□□□□ 0.96
CCS-208ENST00000533244 LPAL2Q16609 132 aa21.03■□□□□ 0.96
CCS-208ENST00000533244 FAM72AQ5TYM5 149 aa21.03■□□□□ 0.96
CCS-208ENST00000533244 FAM72DQ6L9T8 149 aa21.03■□□□□ 0.96
CCS-208ENST00000533244 SLFN11Q7Z7L1 901 aa21.03■□□□□ 0.96
CCS-208ENST00000533244 METTL3Q86U44 580 aaKnown RBP21.03■□□□□ 0.96
CCS-208ENST00000533244 FAM72BQ86X60 149 aa21.03■□□□□ 0.96
CCS-208ENST00000533244 PGBD3Q8N328 593 aa21.03■□□□□ 0.96
CCS-208ENST00000533244 ARFGAP1Q8N6T3 406 aa21.03■□□□□ 0.96
CCS-208ENST00000533244 PPP1R9BQ96SB3 815 aa21.03■□□□□ 0.96
CCS-208ENST00000533244 MAGEB5Q9BZ81 275 aa21.03■□□□□ 0.96
CCS-208ENST00000533244 ZYG11BQ9C0D3 744 aa21.03■□□□□ 0.96
CCS-208ENST00000533244 DUSP15Q9H1R2 295 aaPredicted RBP21.03■□□□□ 0.96
CCS-208ENST00000533244 SLC6A17Q9H1V8 727 aa21.03■□□□□ 0.96
CCS-208ENST00000533244 RETREG1Q9H6L5 497 aa21.03■□□□□ 0.96
CCS-208ENST00000533244 MRPL47Q9HD33 250 aaKnown RBP21.03■□□□□ 0.96
CCS-208ENST00000533244 PTPRZ1P23471 2315 aaPredicted RBP21.02■□□□□ 0.96
CCS-208ENST00000533244 SRGAP2O75044 1071 aa21.02■□□□□ 0.96
CCS-208ENST00000533244 DESP17661 470 aa21.02■□□□□ 0.96
CCS-208ENST00000533244 PSMA2P25787 234 aa21.02■□□□□ 0.96
CCS-208ENST00000533244 SULT2A1Q06520 285 aa21.02■□□□□ 0.96
CCS-208ENST00000533244 ZNF366Q8N895 744 aa21.02■□□□□ 0.96
CCS-208ENST00000533244 RLN3Q8WXF3 142 aa21.02■□□□□ 0.96
CCS-208ENST00000533244 ERLEC1Q96DZ1 483 aa21.02■□□□□ 0.96
CCS-208ENST00000533244 LOXL4Q96JB6 756 aa21.02■□□□□ 0.96
CCS-208ENST00000533244 THAP2Q9H0W7 228 aa21.02■□□□□ 0.96
CCS-208ENST00000533244 FBRSQ9HAH7 460 aa21.02■□□□□ 0.96
CCS-208ENST00000533244 FZD10Q9ULW2 581 aa21.02■□□□□ 0.96
CCS-208ENST00000533244 ZBTB24O43167 697 aaPredicted RBP21.01■□□□□ 0.95
CCS-208ENST00000533244 LRIG2O94898 1065 aa21.01■□□□□ 0.95
CCS-208ENST00000533244 CYP1A2P05177 515 aa21.01■□□□□ 0.95
CCS-208ENST00000533244 RETP07949 1114 aa21.01■□□□□ 0.95
CCS-208ENST00000533244 RHOCP08134 193 aa21.01■□□□□ 0.95
CCS-208ENST00000533244 BCKDHBP21953 392 aa21.01■□□□□ 0.95
CCS-208ENST00000533244 ADKP55263 362 aaKnown RBP21.01■□□□□ 0.95
CCS-208ENST00000533244 ST8SIA6P61647 398 aa21.01■□□□□ 0.95
CCS-208ENST00000533244 SEMA3BQ13214 749 aa21.01■□□□□ 0.95
CCS-208ENST00000533244 BYSLQ13895 437 aaKnown RBP21.01■□□□□ 0.95
CCS-208ENST00000533244 SLC18A3Q16572 532 aa21.01■□□□□ 0.95
CCS-208ENST00000533244 HNRNPA1L2Q32P51 320 aaKnown RBP21.01■□□□□ 0.95
CCS-208ENST00000533244 CCDC122Q5T0U0 273 aa21.01■□□□□ 0.95
CCS-208ENST00000533244 RNF219Q5W0B1 726 aaPredicted RBP21.01■□□□□ 0.95
CCS-208ENST00000533244 SCYL2Q6P3W7 929 aa21.01■□□□□ 0.95
CCS-208ENST00000533244 ARHGAP30Q7Z6I6 1101 aaPredicted RBP21.01■□□□□ 0.95
CCS-208ENST00000533244 TFAP2DQ7Z6R9 452 aa21.01■□□□□ 0.95
CCS-208ENST00000533244 NLRP14Q86W24 1093 aa21.01■□□□□ 0.95
CCS-208ENST00000533244 CNGA4Q8IV77 575 aa21.01■□□□□ 0.95
CCS-208ENST00000533244 OR2T3Q8NH03 318 aa21.01■□□□□ 0.95
CCS-208ENST00000533244 PRSS16Q9NQE7 514 aa21.01■□□□□ 0.95
CCS-208ENST00000533244 MYO1AQ9UBC5 1043 aa21.01■□□□□ 0.95
CCS-208ENST00000533244 SUN2Q9UH99 717 aa21.01■□□□□ 0.95
CCS-208ENST00000533244 MBD1Q9UIS9 605 aaPredicted RBP21.01■□□□□ 0.95
CCS-208ENST00000533244 INVSQ9Y283 1065 aa21.01■□□□□ 0.95
CCS-208ENST00000533244 ZNF217O75362 1048 aa21■□□□□ 0.95
CCS-208ENST00000533244 RHOQP17081 205 aa21■□□□□ 0.95
CCS-208ENST00000533244 L1CAMP32004 1257 aa21■□□□□ 0.95
CCS-208ENST00000533244 GFPT1Q06210 699 aaPredicted RBP21■□□□□ 0.95
CCS-208ENST00000533244 EFHC2Q5JST6 749 aa21■□□□□ 0.95
CCS-208ENST00000533244 C6orf118Q5T5N4 469 aa21■□□□□ 0.95
CCS-208ENST00000533244 PMS2CLQ68D20 193 aa21■□□□□ 0.95
CCS-208ENST00000533244 ZNF783Q6ZMS7 281 aa21■□□□□ 0.95
CCS-208ENST00000533244 TMPRSS6Q8IU80 811 aa21■□□□□ 0.95
CCS-208ENST00000533244 FRMD1Q8N878 549 aa21■□□□□ 0.95
CCS-208ENST00000533244 MRFAP1L1Q96HT8 127 aa21■□□□□ 0.95
CCS-208ENST00000533244 SPACA7Q96KW9 195 aa21■□□□□ 0.95
CCS-208ENST00000533244 PSMB7Q99436 277 aa21■□□□□ 0.95
CCS-208ENST00000533244 PRDM16Q9HAZ2 1276 aa21■□□□□ 0.95
CCS-208ENST00000533244 ZNHIT6Q9NWK9 470 aaKnown RBP21■□□□□ 0.95
CCS-208ENST00000533244 USP36Q9P275 1121 aaKnown RBP21■□□□□ 0.95
CCS-208ENST00000533244 NCDNQ9UBB6 729 aa21■□□□□ 0.95
CCS-208ENST00000533244 SLCO3A1Q9UIG8 710 aa21■□□□□ 0.95
CCS-208ENST00000533244 GMEB2Q9UKD1 530 aa21■□□□□ 0.95
CCS-208ENST00000533244 CHD5Q8TDI0 1954 aa21■□□□□ 0.95
CCS-208ENST00000533244 ABCA7Q8IZY2 2146 aa21■□□□□ 0.95
CCS-208ENST00000533244 IGHV1OR15-9A0A0B4J2B8 117 aa20.99■□□□□ 0.95
CCS-208ENST00000533244 ILVBLA1L0T0 632 aa20.99■□□□□ 0.95
CCS-208ENST00000533244 AKR1B15C9JRZ8 316 aaPredicted RBP20.99■□□□□ 0.95
CCS-208ENST00000533244 EPN2O95208 641 aa20.99■□□□□ 0.95
CCS-208ENST00000533244 OR1E1P30953 314 aa20.99■□□□□ 0.95
CCS-208ENST00000533244 STK19P49842 368 aaPredicted RBP20.99■□□□□ 0.95
CCS-208ENST00000533244 ZNF75DP51815 510 aa20.99■□□□□ 0.95
CCS-208ENST00000533244 GALCP54803 685 aa20.99■□□□□ 0.95
CCS-208ENST00000533244 CYP4V2Q6ZWL3 525 aaPredicted RBP20.99■□□□□ 0.95
CCS-208ENST00000533244 PYROXD2Q8N2H3 581 aa20.99■□□□□ 0.95
CCS-208ENST00000533244 DCLK2Q8N568 766 aa20.99■□□□□ 0.95
CCS-208ENST00000533244 DCAF4L2Q8NA75 395 aa20.99■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms