RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 CCDC66A2RUB6 948 aa11.54□□□□□ -0.56
TRAPPC4-211ENST00000533012 LRRD1A4D1F6 860 aa11.54□□□□□ -0.56
TRAPPC4-211ENST00000533012 ZRANB2O95218 330 aaKnown RBP eCLIP11.54□□□□□ -0.56
TRAPPC4-211ENST00000533012 ERCC2P18074 760 aa11.54□□□□□ -0.56
TRAPPC4-211ENST00000533012 AMPD1P23109 780 aa11.54□□□□□ -0.56
TRAPPC4-211ENST00000533012 KDELR1P24390 212 aa11.54□□□□□ -0.56
TRAPPC4-211ENST00000533012 IL4RP24394 825 aa11.54□□□□□ -0.56
TRAPPC4-211ENST00000533012 CSKP41240 450 aa11.54□□□□□ -0.56
TRAPPC4-211ENST00000533012 ARSEP51690 589 aa11.54□□□□□ -0.56
TRAPPC4-211ENST00000533012 PLK1P53350 603 aa11.54□□□□□ -0.56
TRAPPC4-211ENST00000533012 MRPS21P82921 87 aaKnown RBP11.54□□□□□ -0.56
TRAPPC4-211ENST00000533012 FZD5Q13467 585 aa11.54□□□□□ -0.56
TRAPPC4-211ENST00000533012 EIF4HQ15056 248 aaKnown RBP11.54□□□□□ -0.56
TRAPPC4-211ENST00000533012 PITRM1Q5JRX3 1037 aa11.54□□□□□ -0.56
TRAPPC4-211ENST00000533012 EMC10Q5UCC4 262 aa11.54□□□□□ -0.56
TRAPPC4-211ENST00000533012 MBLAC2Q68D91 279 aa11.54□□□□□ -0.56
TRAPPC4-211ENST00000533012 NT5DC3Q86UY8 548 aa11.54□□□□□ -0.56
TRAPPC4-211ENST00000533012 ADIPOR2Q86V24 386 aa11.54□□□□□ -0.56
TRAPPC4-211ENST00000533012 CCDC105Q8IYK2 499 aa11.54□□□□□ -0.56
TRAPPC4-211ENST00000533012 RCOR2Q8IZ40 523 aa11.54□□□□□ -0.56
TRAPPC4-211ENST00000533012 FBXL6Q8N531 539 aa11.54□□□□□ -0.56
TRAPPC4-211ENST00000533012 RAPGEF5Q92565 580 aa11.54□□□□□ -0.56
TRAPPC4-211ENST00000533012 CLDN23Q96B33 292 aa11.54□□□□□ -0.56
TRAPPC4-211ENST00000533012 LMLNQ96KR4 655 aa11.54□□□□□ -0.56
TRAPPC4-211ENST00000533012 CSPG4P5Q96PW8 444 aa11.54□□□□□ -0.56
TRAPPC4-211ENST00000533012 FEM1AQ9BSK4 669 aa11.54□□□□□ -0.56
TRAPPC4-211ENST00000533012 CIPCQ9C0C6 399 aa11.54□□□□□ -0.56
TRAPPC4-211ENST00000533012 RBM12Q9NTZ6 932 aaKnown RBP11.54□□□□□ -0.56
TRAPPC4-211ENST00000533012 KLHL11Q9NVR0 708 aa11.54□□□□□ -0.56
TRAPPC4-211ENST00000533012 TRMT1Q9NXH9 659 aaKnown RBP11.54□□□□□ -0.56
TRAPPC4-211ENST00000533012 PCDHA3Q9Y5H8 950 aa11.54□□□□□ -0.56
TRAPPC4-211ENST00000533012 MUC3AQ02505 3323 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 GOLGA6L9A6NEM1 432 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 MIF4GDA9UHW6 222 aaKnown RBP11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 NPC1O15118 1278 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 PI15O43692 258 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 GPR37L1O60883 481 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 RAMP2O60895 175 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 ATG13O75143 517 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 RNF40O75150 1001 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 KRT1P04264 644 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 ASLP04424 464 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 DCNP07585 359 aaKnown RBP11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 CD48P09326 243 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 AOC1P19801 751 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 CTNNA2P26232 953 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 MZF1P28698 734 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 CTNNA1P35221 906 aaKnown RBP11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 TIE1P35590 1138 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 ETFBP38117 255 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 MAGEA9P43362 315 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 RPS9P46781 194 aaKnown RBP11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 NDST2P52849 883 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 SEC13P55735 322 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 YBEYP58557 167 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 GNA12Q03113 381 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 SULT2A1Q06520 285 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 MMRN1Q13201 1228 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 DPYSL3Q14195 570 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 POLD3Q15054 466 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 PLEKHG6Q3KR16 790 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 C2orf27AQ580R0 203 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 ANKRD20A8PQ5CZ79 823 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 TMEM31Q5JXX7 168 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 TMEM215Q68D42 235 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 CWF19L1Q69YN2 538 aaKnown RBP11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 IL31Q6EBC2 164 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 SDE2Q6IQ49 451 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 SFTPA1Q8IWL2 248 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 REXO1L1PQ8IX06 675 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 KATNAL2Q8IYT4 538 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 APCDD1Q8J025 514 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 LZTR1Q8N653 840 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 UBL4BQ8N7F7 174 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 TRIM58Q8NG06 486 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 OR52K2Q8NGK3 314 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 TSC1Q92574 1164 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 EZH1Q92800 747 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 TTC17Q96AE7 1141 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 RNF25Q96BH1 459 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 ZNF670Q9BS34 389 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 SPON2Q9BUD6 331 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 MAGEH1Q9H213 219 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 RRAGDQ9NQL2 400 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 NDFIP2Q9NV92 336 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 ZNF212Q9UDV6 495 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 VPS28Q9UK41 221 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 INTS6Q9UL03 887 aaKnown RBP11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 HPCAL4Q9UM19 191 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 NEU3Q9UQ49 428 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 CAPN6Q9Y6Q1 641 aa11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 KIF26AQ9ULI4 1882 aaPredicted RBP11.53□□□□□ -0.56
TRAPPC4-211ENST00000533012 TICRRQ7Z2Z1 1910 aa11.52□□□□□ -0.56
TRAPPC4-211ENST00000533012 TRIOO75962 3097 aa11.52□□□□□ -0.56
TRAPPC4-211ENST00000533012 BDP1A6H8Y1 2624 aa11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 A0A0D9SEW6 157 aa11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 FAM86C2PA6NEL3 165 aa11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 PRR33A8MZF0 331 aa11.52□□□□□ -0.57
TRAPPC4-211ENST00000533012 ZNF487B1APH4 448 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms