RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 REV1Q9UBZ9 1251 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 LIMA1Q9UHB6 759 aaKnown RBP6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 NAGPAQ9UK23 515 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 SH3BP1Q9Y3L3 701 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 SIT1Q9Y3P8 196 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 DYRK1BQ9Y463 629 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 WNT6Q9Y6F9 365 aa6.04□□□□□ -1.44
HMGB1P42-201ENST00000532126 NCOR1O75376 2440 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 LRRC10BA6NIK2 292 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 LGALS16A8MUM7 142 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 SPECC1L-ADORA2AF8WAN1 911 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 FOXN3O00409 490 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 SLC9A3R1O14745 358 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 ATXN7O15265 892 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 NCAM2O15394 837 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 PI15O43692 258 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 NFATC1O95644 943 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 IL33O95760 270 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 CAVIN2O95810 425 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 TBX18O95935 607 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 DCNP07585 359 aaKnown RBP6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 RARGP13631 454 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 ATP1A3P13637 1013 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 LCP1P13796 627 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 ARSAP15289 507 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 UCHL3P15374 230 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 ZNF18P17022 549 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 NAT1P18440 290 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 PGFP49763 221 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 RGS7P49802 495 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 BPIFB4P59827 614 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 YWHAGP61981 247 aaKnown RBP eCLIP6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 TPM4P67936 248 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 ZXDBP98169 803 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 UBXN1Q04323 297 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 GOLGA8FQ08AF8 430 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 GOLGA8DPQ0D2H9 430 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 ADIGQ0VDE8 80 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 DRAP1Q14919 205 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 SYCP1Q15431 976 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 MEA1Q16626 185 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 ATP13A4Q4VNC1 1196 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 PKDCCQ504Y2 493 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 C10orf120Q5SQS8 335 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 KLHDC7AQ5VTJ3 777 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 TRIM68Q6AZZ1 485 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 PM20D1Q6GTS8 502 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 PMF1Q6P1K2 205 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 DENND1BQ6P3S1 775 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 KLHDC10Q6PID8 442 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 FIGNL1Q6PIW4 674 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 CHST15Q7LFX5 561 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 MAMDC2Q7Z304 686 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 MAATS1Q7Z4T9 603 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 SLC47A2Q86VL8 602 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 RALGPS2Q86X27 583 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 MIB1Q86YT6 1006 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 DHX40Q8IX18 779 aaKnown RBP6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 FAM71AQ8IYT1 594 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 CBARPQ8N350 705 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 KIAA1958Q8N8K9 716 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 SLC35F5Q8WV83 523 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 ZNF606Q8WXB4 792 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 GOLGA1Q92805 767 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 ATP2A3Q93084 1043 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 AHCYL2Q96HN2 611 aaKnown RBP6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 HSFY1Q96LI6 401 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 LRGUKQ96M69 825 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 CDK5RAP1Q96SZ6 601 aaKnown RBP6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 PRRX2Q99811 253 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 FUCA2Q9BTY2 467 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 STK33Q9BYT3 514 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 OSBPL6Q9BZF3 934 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 ULBP1Q9BZM6 244 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 HSD3B7Q9H2F3 369 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 PDCL3Q9H2J4 239 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 LINC00597Q9H2U6 94 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 ECT2Q9H8V3 914 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 FAM204AQ9H8W3 233 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 NMUR1Q9HB89 426 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 LTB4R2Q9NPC1 389 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 ACP6Q9NPH0 428 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 HPS4Q9NQG7 708 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 CNGB3Q9NQW8 809 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 FAM207AQ9NSI2 230 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 TBC1D14Q9P2M4 693 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 DNMT3LQ9UJW3 386 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 AJAP1Q9UKB5 411 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 NUDT5Q9UKK9 219 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 NDRG2Q9UN36 371 aaKnown RBP6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 MTF2Q9Y483 593 aaPredicted RBP6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 FHOD1Q9Y613 1164 aa6.03□□□□□ -1.44
HMGB1P42-201ENST00000532126 DOCK8Q8NF50 2099 aa6.02□□□□□ -1.45
HMGB1P42-201ENST00000532126 OTOL1A6NHN0 477 aaPredicted RBP6.02□□□□□ -1.45
HMGB1P42-201ENST00000532126 SHISA7A6NL88 538 aa6.02□□□□□ -1.45
HMGB1P42-201ENST00000532126 YJEFN3A6XGL0 299 aa6.02□□□□□ -1.45
HMGB1P42-201ENST00000532126 E7ENQ6 273 aa6.02□□□□□ -1.45
HMGB1P42-201ENST00000532126 F8VZ95 297 aa6.02□□□□□ -1.45
HMGB1P42-201ENST00000532126 PIK3R2O00459 728 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms