RNA–Protein interactions for RNA: ENST00000531858.1

AC055878.1-201, humanhuman

TSL 3 BASIC

Gene AC055878.1, Length 281 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055878.1-201ENST00000531858 RCE1Q9Y256 329 aa4.57□□□□□ -1.68
AC055878.1-201ENST00000531858 KLHL20Q9Y2M5 609 aa4.57□□□□□ -1.68
AC055878.1-201ENST00000531858 ADAM18Q9Y3Q7 739 aa4.57□□□□□ -1.68
AC055878.1-201ENST00000531858 SPAG9O60271 1321 aaKnown RBP4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 CCDC187A0A096LP49 1063 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 TRBC2A0A5B9 178 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 A8MVJ9 347 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 CAPN9O14815 690 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 CCNT1O60563 726 aaKnown RBP4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 SEC22BO75396 215 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 IPO7O95373 1038 aaKnown RBP4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 CHRM4P08173 479 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 TMEM225BP0DP42 221 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 EEF2P13639 858 aaKnown RBP4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 FDPSP14324 419 aaKnown RBP4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 GCSHP23434 173 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 MAPK3P27361 379 aaPredicted RBP4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 TLX1P31314 330 aaPredicted RBP4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 MCM7P33993 719 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 TRHRP34981 398 aaPredicted RBP4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 BMPR1AP36894 532 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 PBX3P40426 434 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 PEX19P40855 299 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 GABRB2P47870 512 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 MVDP53602 400 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 FAM3BP58499 235 aaPredicted RBP4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 PSMC6P62333 389 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 ATP2C1P98194 919 aaPredicted RBP4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 IL1RL1Q01638 556 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 SLC14A1Q13336 389 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 TDGQ13569 410 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 ALCAMQ13740 583 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 USP10Q14694 798 aaKnown RBP4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 GPR162Q16538 588 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 ZNF805Q5CZA5 627 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 KRBOX4Q5JUW0 171 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 KRT79Q5XKE5 535 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 EFCAB12Q6NXP0 572 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 TMEM81Q6P7N7 255 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 TMEM88Q6PEY1 159 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 TRAT1Q6PIZ9 186 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 FAM111BQ6SJ93 734 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 CLEC9AQ6UXN8 241 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 LINC00696Q6ZRV3 163 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 Q6ZUG5 572 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 GSTA5Q7RTV2 222 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 PLPPR4Q7Z2D5 763 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 NUP54Q7Z3B4 507 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 RPAINQ86UA6 219 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 FAM83AQ86UY5 434 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 MINDY1Q8N5J2 469 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 LILRB1Q8NHL6 650 aaPredicted RBP4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 DENND1AQ8TEH3 1009 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 CNOT9Q92600 299 aaKnown RBP4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 NPIPB3Q92617 1050 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 TFAP2CQ92754 450 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 RSPRY1Q96DX4 576 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 MCRS1Q96EZ8 462 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 ZSWIM3Q96MP5 696 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 ABHD1Q96SE0 405 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 PNKPQ96T60 521 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 FSD1Q9BTV5 496 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 MLPHQ9BV36 600 aaPredicted RBP4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 RNF32Q9H0A6 362 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 TNMDQ9H2S6 317 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 EPHX3Q9H6B9 360 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 TASP1Q9H6P5 420 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 FBRSL1Q9HCM7 1045 aaKnown RBP4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 IL1RAPL2Q9NP60 686 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 MID1IP1Q9NPA3 183 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 SNX15Q9NRS6 342 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 SLC22A11Q9NSA0 550 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 NCKIPSDQ9NZQ3 722 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 TRPC5Q9UL62 973 aaPredicted RBP4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 ZDHHC9Q9Y397 364 aa4.56□□□□□ -1.68
AC055878.1-201ENST00000531858 LRRD1A4D1F6 860 aa4.55□□□□□ -1.68
AC055878.1-201ENST00000531858 OR2A25A4D2G3 310 aa4.55□□□□□ -1.68
AC055878.1-201ENST00000531858 AGAP5A6NIR3 686 aa4.55□□□□□ -1.68
AC055878.1-201ENST00000531858 PRR5-ARHGAP8B1AHC4 643 aa4.55□□□□□ -1.68
AC055878.1-201ENST00000531858 H0YAE9 185 aa4.55□□□□□ -1.68
AC055878.1-201ENST00000531858 CCDC188H7C350 402 aa4.55□□□□□ -1.68
AC055878.1-201ENST00000531858 SYN3O14994 580 aa4.55□□□□□ -1.68
AC055878.1-201ENST00000531858 KERAO60938 352 aa4.55□□□□□ -1.68
AC055878.1-201ENST00000531858 PPFIA2O75334 1257 aa4.55□□□□□ -1.68
AC055878.1-201ENST00000531858 TPOP07202 933 aa4.55□□□□□ -1.68
AC055878.1-201ENST00000531858 CSF1RP07333 972 aa4.55□□□□□ -1.68
AC055878.1-201ENST00000531858 FCER1AP12319 257 aa4.55□□□□□ -1.68
AC055878.1-201ENST00000531858 ZNF28P17035 718 aa4.55□□□□□ -1.68
AC055878.1-201ENST00000531858 ERCC2P18074 760 aa4.55□□□□□ -1.68
AC055878.1-201ENST00000531858 GABRB1P18505 474 aa4.55□□□□□ -1.68
AC055878.1-201ENST00000531858 TCEA1P23193 301 aaKnown RBP4.55□□□□□ -1.68
AC055878.1-201ENST00000531858 CPT2P23786 658 aa4.55□□□□□ -1.68
AC055878.1-201ENST00000531858 NTSR1P30989 418 aa4.55□□□□□ -1.68
AC055878.1-201ENST00000531858 HNF1BP35680 557 aa4.55□□□□□ -1.68
AC055878.1-201ENST00000531858 CD96P40200 585 aa4.55□□□□□ -1.68
AC055878.1-201ENST00000531858 MFAP4P55083 255 aa4.55□□□□□ -1.68
AC055878.1-201ENST00000531858 FOXL2P58012 376 aa4.55□□□□□ -1.68
AC055878.1-201ENST00000531858 ACTN3Q08043 901 aaPredicted RBP4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms