RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 SLC29A4Q7RTT9 530 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 KRT27Q7Z3Y8 459 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 CPLX4Q7Z7G2 160 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 DIS3L2Q8IYB7 885 aaKnown RBP4.83□□□□□ -1.64
USP47-211ENST00000531513 SLC2A12Q8TD20 617 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 CREB3L4Q8TEY5 395 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 ATG4AQ8WYN0 398 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 TBC1D5Q92609 795 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 PIGSQ96S52 555 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 PHF7Q9BWX1 381 aaPredicted RBP4.83□□□□□ -1.64
USP47-211ENST00000531513 KCNK9Q9NPC2 374 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 FBXO28Q9NVF7 368 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 HAUS2Q9NVX0 235 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 ELOVL5Q9NYP7 299 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 TBC1D14Q9P2M4 693 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 NKX1-2Q9UD57 310 aaPredicted RBP4.83□□□□□ -1.64
USP47-211ENST00000531513 TBC1D29Q9UFV1 150 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 NAALADL1Q9UQQ1 740 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 DRG1Q9Y295 367 aaKnown RBP4.83□□□□□ -1.64
USP47-211ENST00000531513 PCDHA10Q9Y5I2 948 aa4.83□□□□□ -1.64
USP47-211ENST00000531513 MBD3L5A6NJ08 208 aaPredicted RBP4.82□□□□□ -1.64
USP47-211ENST00000531513 H0YIZ8 118 aa4.82□□□□□ -1.64
USP47-211ENST00000531513 PEX12O00623 359 aa4.82□□□□□ -1.64
USP47-211ENST00000531513 ANP32CO43423 234 aa4.82□□□□□ -1.64
USP47-211ENST00000531513 TULP3O75386 442 aa4.82□□□□□ -1.64
USP47-211ENST00000531513 HEXIM1O94992 359 aaKnown RBP4.82□□□□□ -1.64
USP47-211ENST00000531513 SGPL1O95470 568 aa4.82□□□□□ -1.64
USP47-211ENST00000531513 SCGB1D1O95968 90 aa4.82□□□□□ -1.64
USP47-211ENST00000531513 TUBB4AP04350 444 aa4.82□□□□□ -1.64
USP47-211ENST00000531513 TMEM225BP0DP42 221 aa4.82□□□□□ -1.64
USP47-211ENST00000531513 TNNT1P13805 278 aa4.82□□□□□ -1.64
USP47-211ENST00000531513 CHN1P15882 459 aa4.82□□□□□ -1.64
USP47-211ENST00000531513 MAPK4P31152 587 aa4.82□□□□□ -1.64
USP47-211ENST00000531513 DGKQP52824 942 aa4.82□□□□□ -1.64
USP47-211ENST00000531513 FAM3BP58499 235 aaPredicted RBP4.82□□□□□ -1.64
USP47-211ENST00000531513 EIF4A1P60842 406 aaKnown RBP4.82□□□□□ -1.64
USP47-211ENST00000531513 SP2Q02086 613 aa4.82□□□□□ -1.64
USP47-211ENST00000531513 TBL3Q12788 808 aaKnown RBP4.82□□□□□ -1.64
USP47-211ENST00000531513 KCNJ12Q14500 433 aa4.82□□□□□ -1.64
USP47-211ENST00000531513 AASDHQ4L235 1098 aaPredicted RBP4.82□□□□□ -1.64
USP47-211ENST00000531513 CFAP58Q5T655 872 aa4.82□□□□□ -1.64
USP47-211ENST00000531513 ZNF618Q5T7W0 954 aa4.82□□□□□ -1.64
USP47-211ENST00000531513 TEDDM1Q5T9Z0 273 aa4.82□□□□□ -1.64
USP47-211ENST00000531513 AWAT2Q6E213 333 aa4.82□□□□□ -1.64
USP47-211ENST00000531513 INO80CQ6PI98 192 aaPredicted RBP4.82□□□□□ -1.64
USP47-211ENST00000531513 ATF7IPQ6VMQ6 1270 aa4.82□□□□□ -1.64
USP47-211ENST00000531513 MAVSQ7Z434 540 aa4.82□□□□□ -1.64
USP47-211ENST00000531513 PTGR2Q8N8N7 351 aaPredicted RBP4.82□□□□□ -1.64
USP47-211ENST00000531513 ZCCHC10Q8TBK6 192 aa4.82□□□□□ -1.64
USP47-211ENST00000531513 KCNG4Q8TDN1 519 aa4.82□□□□□ -1.64
USP47-211ENST00000531513 CUL5Q93034 780 aa4.82□□□□□ -1.64
USP47-211ENST00000531513 HERC2P3Q9BVR0 1158 aa4.82□□□□□ -1.64
USP47-211ENST00000531513 SPRTNQ9H040 489 aaPredicted RBP4.82□□□□□ -1.64
USP47-211ENST00000531513 USP44Q9H0E7 712 aa4.82□□□□□ -1.64
USP47-211ENST00000531513 VPS28Q9UK41 221 aa4.82□□□□□ -1.64
USP47-211ENST00000531513 RCE1Q9Y256 329 aa4.82□□□□□ -1.64
USP47-211ENST00000531513 GDAQ9Y2T3 454 aa4.82□□□□□ -1.64
USP47-211ENST00000531513 UBE2J1Q9Y385 318 aaPredicted RBP4.82□□□□□ -1.64
USP47-211ENST00000531513 AGAP5A6NIR3 686 aa4.81□□□□□ -1.64
USP47-211ENST00000531513 M0QZQ0 153 aa4.81□□□□□ -1.64
USP47-211ENST00000531513 TSPAN4O14817 238 aa4.81□□□□□ -1.64
USP47-211ENST00000531513 NKX2-8O15522 239 aa4.81□□□□□ -1.64
USP47-211ENST00000531513 DHX16O60231 1041 aaKnown RBP4.81□□□□□ -1.64
USP47-211ENST00000531513 SLC3A2P08195 630 aaKnown RBP4.81□□□□□ -1.64
USP47-211ENST00000531513 ACADMP11310 421 aa4.81□□□□□ -1.64
USP47-211ENST00000531513 MMP8P22894 467 aa4.81□□□□□ -1.64
USP47-211ENST00000531513 PSMA4P25789 261 aaKnown RBP4.81□□□□□ -1.64
USP47-211ENST00000531513 COPB2P35606 906 aa4.81□□□□□ -1.64
USP47-211ENST00000531513 GGT5P36269 586 aa4.81□□□□□ -1.64
USP47-211ENST00000531513 PNPLA4P41247 253 aa4.81□□□□□ -1.64
USP47-211ENST00000531513 FOXG1P55316 489 aaPredicted RBP4.81□□□□□ -1.64
USP47-211ENST00000531513 RPL15P61313 204 aaKnown RBP4.81□□□□□ -1.64
USP47-211ENST00000531513 MAMLD1Q13495 774 aa4.81□□□□□ -1.64
USP47-211ENST00000531513 BFSP2Q13515 415 aa4.81□□□□□ -1.64
USP47-211ENST00000531513 CUL4AQ13619 759 aa4.81□□□□□ -1.64
USP47-211ENST00000531513 MFSD4BQ5TF39 518 aa4.81□□□□□ -1.64
USP47-211ENST00000531513 ANKRD40Q6AI12 368 aa4.81□□□□□ -1.64
USP47-211ENST00000531513 ZNF517Q6ZMY9 492 aaPredicted RBP4.81□□□□□ -1.64
USP47-211ENST00000531513 ANKRD23Q86SG2 305 aa4.81□□□□□ -1.64
USP47-211ENST00000531513 RAB11FIP4Q86YS3 637 aa4.81□□□□□ -1.64
USP47-211ENST00000531513 LSM14AQ8ND56 463 aaKnown RBP4.81□□□□□ -1.64
USP47-211ENST00000531513 NFKBIDQ8NI38 313 aa4.81□□□□□ -1.64
USP47-211ENST00000531513 NSUN4Q96CB9 384 aaKnown RBP4.81□□□□□ -1.64
USP47-211ENST00000531513 STN1Q9H668 368 aaKnown RBP4.81□□□□□ -1.64
USP47-211ENST00000531513 EIF2B3Q9NR50 452 aaKnown RBP4.81□□□□□ -1.64
USP47-211ENST00000531513 PLSCR4Q9NRQ2 329 aa4.81□□□□□ -1.64
USP47-211ENST00000531513 PPP1R14DQ9NXH3 145 aa4.81□□□□□ -1.64
USP47-211ENST00000531513 TAS2R10Q9NYW0 307 aa4.81□□□□□ -1.64
USP47-211ENST00000531513 RAB21Q9UL25 225 aa4.81□□□□□ -1.64
USP47-211ENST00000531513 CAMK2AQ9UQM7 478 aa4.81□□□□□ -1.64
USP47-211ENST00000531513 PSAT1Q9Y617 370 aa4.81□□□□□ -1.64
USP47-211ENST00000531513 PIAS3Q9Y6X2 628 aa4.81□□□□□ -1.64
USP47-211ENST00000531513 TBC1D3DA0A087WVF3 549 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 TBC1D3IA0A087WXS9 549 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 TBC1D3EA0A087X179 549 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 TBC1D3KA0A087X1G2 549 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 TBC1D3BA6NDS4 549 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 TBC1D3FA6NER0 549 aaPredicted RBP4.8□□□□□ -1.64
USP47-211ENST00000531513 B4DLN1 442 aa4.8□□□□□ -1.64
USP47-211ENST00000531513 TBC1D3LB9A6J9 549 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms