RNA–Protein interactions for RNA: ENST00000531042.5

CPSF1-205, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 580 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-205ENST00000531042 APOBEC2Q9Y235 224 aaKnown RBP16.28■□□□□ 0.2
CPSF1-205ENST00000531042 A0A1W2PPC4 97 aa16.27■□□□□ 0.2
CPSF1-205ENST00000531042 LRRC72A6NJI9 287 aa16.27■□□□□ 0.2
CPSF1-205ENST00000531042 C10orf142B7Z368 130 aa16.27■□□□□ 0.2
CPSF1-205ENST00000531042 RNASEH2AO75792 299 aaKnown RBP16.27■□□□□ 0.2
CPSF1-205ENST00000531042 NNMTP40261 264 aa16.27■□□□□ 0.2
CPSF1-205ENST00000531042 NUMBP49757 651 aa16.27■□□□□ 0.2
CPSF1-205ENST00000531042 OXCT1P55809 520 aa16.27■□□□□ 0.2
CPSF1-205ENST00000531042 SNX16P57768 344 aa16.27■□□□□ 0.2
CPSF1-205ENST00000531042 SLC6A3Q01959 620 aa16.27■□□□□ 0.2
CPSF1-205ENST00000531042 SULT2A1Q06520 285 aa16.27■□□□□ 0.2
CPSF1-205ENST00000531042 SUZ12Q15022 739 aaKnown RBP16.27■□□□□ 0.2
CPSF1-205ENST00000531042 KCNT1Q5JUK3 1230 aa16.27■□□□□ 0.2
CPSF1-205ENST00000531042 DPY19L2P1Q6NXN4 242 aa16.27■□□□□ 0.2
CPSF1-205ENST00000531042 NCEH1Q6PIU2 408 aa16.27■□□□□ 0.2
CPSF1-205ENST00000531042 SLC26A9Q7LBE3 791 aa16.27■□□□□ 0.2
CPSF1-205ENST00000531042 SLC47A2Q86VL8 602 aa16.27■□□□□ 0.2
CPSF1-205ENST00000531042 FAM114A1Q8IWE2 563 aa16.27■□□□□ 0.2
CPSF1-205ENST00000531042 STK40Q8N2I9 435 aa16.27■□□□□ 0.2
CPSF1-205ENST00000531042 AADATQ8N5Z0 425 aa16.27■□□□□ 0.2
CPSF1-205ENST00000531042 OR2T34Q8NGX1 318 aa16.27■□□□□ 0.2
CPSF1-205ENST00000531042 RHBDD1Q8TEB9 315 aa16.27■□□□□ 0.2
CPSF1-205ENST00000531042 ZCCHC14Q8WYQ9 949 aaKnown RBP16.27■□□□□ 0.2
CPSF1-205ENST00000531042 IGSF8Q969P0 613 aa16.27■□□□□ 0.2
CPSF1-205ENST00000531042 OMDQ99983 421 aa16.27■□□□□ 0.2
CPSF1-205ENST00000531042 NDST4Q9H3R1 872 aa16.27■□□□□ 0.2
CPSF1-205ENST00000531042 KNL1Q8NG31 2342 aa16.27■□□□□ 0.19
CPSF1-205ENST00000531042 TP53BP1Q12888 1972 aaPredicted RBP16.26■□□□□ 0.19
CPSF1-205ENST00000531042 KCNK3O14649 394 aa16.26■□□□□ 0.19
CPSF1-205ENST00000531042 DAB1O75553 588 aa16.26■□□□□ 0.19
CPSF1-205ENST00000531042 ADH1BP00325 375 aa16.26■□□□□ 0.19
CPSF1-205ENST00000531042 PNMA6AP0CW24 399 aaPredicted RBP16.26■□□□□ 0.19
CPSF1-205ENST00000531042 VAV1P15498 845 aa16.26■□□□□ 0.19
CPSF1-205ENST00000531042 GOT1P17174 413 aa16.26■□□□□ 0.19
CPSF1-205ENST00000531042 C5AR1P21730 350 aa16.26■□□□□ 0.19
CPSF1-205ENST00000531042 NOS2P35228 1153 aa16.26■□□□□ 0.19
CPSF1-205ENST00000531042 CTSKP43235 329 aa16.26■□□□□ 0.19
CPSF1-205ENST00000531042 PSMD8P48556 350 aa16.26■□□□□ 0.19
CPSF1-205ENST00000531042 RACK1P63244 317 aaKnown RBP16.26■□□□□ 0.19
CPSF1-205ENST00000531042 CENPCQ03188 943 aa16.26■□□□□ 0.19
CPSF1-205ENST00000531042 NME3Q13232 169 aa16.26■□□□□ 0.19
CPSF1-205ENST00000531042 MTA1Q13330 715 aa16.26■□□□□ 0.19
CPSF1-205ENST00000531042 AUHQ13825 339 aaKnown RBP16.26■□□□□ 0.19
CPSF1-205ENST00000531042 ELAVL3Q14576 367 aaKnown RBP16.26■□□□□ 0.19
CPSF1-205ENST00000531042 PTPN20Q4JDL3 420 aa16.26■□□□□ 0.19
CPSF1-205ENST00000531042 VWA3BQ502W6 1294 aa16.26■□□□□ 0.19
CPSF1-205ENST00000531042 MIIPQ5JXC2 388 aa16.26■□□□□ 0.19
CPSF1-205ENST00000531042 SND1Q7KZF4 910 aaKnown RBP eCLIP16.26■□□□□ 0.19
CPSF1-205ENST00000531042 ADAT2Q7Z6V5 191 aaKnown RBP16.26■□□□□ 0.19
CPSF1-205ENST00000531042 FAM71AQ8IYT1 594 aa16.26■□□□□ 0.19
CPSF1-205ENST00000531042 ZNF397Q8NF99 534 aaPredicted RBP16.26■□□□□ 0.19
CPSF1-205ENST00000531042 ALG14Q96F25 216 aa16.26■□□□□ 0.19
CPSF1-205ENST00000531042 RPRD1AQ96P16 312 aaPredicted RBP16.26■□□□□ 0.19
CPSF1-205ENST00000531042 CDC6Q99741 560 aa16.26■□□□□ 0.19
CPSF1-205ENST00000531042 TUBGCP2Q9BSJ2 902 aa16.26■□□□□ 0.19
CPSF1-205ENST00000531042 CLSTN2Q9H4D0 955 aa16.26■□□□□ 0.19
CPSF1-205ENST00000531042 SYNCQ9H7C4 482 aa16.26■□□□□ 0.19
CPSF1-205ENST00000531042 EBF2Q9HAK2 575 aa16.26■□□□□ 0.19
CPSF1-205ENST00000531042 PLCB1Q9NQ66 1216 aa16.26■□□□□ 0.19
CPSF1-205ENST00000531042 TOR4AQ9NXH8 423 aa16.26■□□□□ 0.19
CPSF1-205ENST00000531042 CHMP5Q9NZZ3 219 aa16.26■□□□□ 0.19
CPSF1-205ENST00000531042 VANGL2Q9ULK5 521 aa16.26■□□□□ 0.19
CPSF1-205ENST00000531042 BTBD3Q9Y2F9 522 aa16.26■□□□□ 0.19
CPSF1-205ENST00000531042 HS3ST4Q9Y661 456 aa16.26■□□□□ 0.19
CPSF1-205ENST00000531042 FREM2Q5SZK8 3169 aa16.26■□□□□ 0.19
CPSF1-205ENST00000531042 PLXNB3Q9ULL4 1909 aa16.25■□□□□ 0.19
CPSF1-205ENST00000531042 SRRM3A6NNA2 597 aaPredicted RBP16.25■□□□□ 0.19
CPSF1-205ENST00000531042 H0Y8X5 98 aa16.25■□□□□ 0.19
CPSF1-205ENST00000531042 M0QYT0 321 aa16.25■□□□□ 0.19
CPSF1-205ENST00000531042 VILLO15195 856 aa16.25■□□□□ 0.19
CPSF1-205ENST00000531042 PCDHGA12O60330 932 aa16.25■□□□□ 0.19
CPSF1-205ENST00000531042 IL1BP01584 269 aa16.25■□□□□ 0.19
CPSF1-205ENST00000531042 PRKCSHP14314 528 aaPredicted RBP16.25■□□□□ 0.19
CPSF1-205ENST00000531042 VASPP50552 380 aaPredicted RBP16.25■□□□□ 0.19
CPSF1-205ENST00000531042 CCT8P50990 548 aa16.25■□□□□ 0.19
CPSF1-205ENST00000531042 IRAK1P51617 712 aa16.25■□□□□ 0.19
CPSF1-205ENST00000531042 CCR5P51681 352 aa16.25■□□□□ 0.19
CPSF1-205ENST00000531042 BPIFB4P59827 614 aa16.25■□□□□ 0.19
CPSF1-205ENST00000531042 KCNJ12Q14500 433 aa16.25■□□□□ 0.19
CPSF1-205ENST00000531042 DPCR1Q3MIW9 517 aa16.25■□□□□ 0.19
CPSF1-205ENST00000531042 C5orf22Q49AR2 442 aa16.25■□□□□ 0.19
CPSF1-205ENST00000531042 OTUD1Q5VV17 481 aaPredicted RBP16.25■□□□□ 0.19
CPSF1-205ENST00000531042 ZDHHC17Q8IUH5 632 aa16.25■□□□□ 0.19
CPSF1-205ENST00000531042 OR52K2Q8NGK3 314 aa16.25■□□□□ 0.19
CPSF1-205ENST00000531042 FRS2Q8WU20 508 aa16.25■□□□□ 0.19
CPSF1-205ENST00000531042 SLC6A18Q96N87 628 aa16.25■□□□□ 0.19
CPSF1-205ENST00000531042 PPP1R9BQ96SB3 815 aa16.25■□□□□ 0.19
CPSF1-205ENST00000531042 FEM1AQ9BSK4 669 aa16.25■□□□□ 0.19
CPSF1-205ENST00000531042 ACE2Q9BYF1 805 aaPredicted RBP16.25■□□□□ 0.19
CPSF1-205ENST00000531042 PTPRBP23467 1997 aa16.25■□□□□ 0.19
CPSF1-205ENST00000531042 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP16.24■□□□□ 0.19
CPSF1-205ENST00000531042 DFNA5O60443 496 aa16.24■□□□□ 0.19
CPSF1-205ENST00000531042 PAGE1O75459 146 aa16.24■□□□□ 0.19
CPSF1-205ENST00000531042 DKK1O94907 266 aa16.24■□□□□ 0.19
CPSF1-205ENST00000531042 CAPNS1P04632 268 aa16.24■□□□□ 0.19
CPSF1-205ENST00000531042 ATXN1LP0C7T5 689 aaKnown RBP16.24■□□□□ 0.19
CPSF1-205ENST00000531042 ERCC5P28715 1186 aaPredicted RBP16.24■□□□□ 0.19
CPSF1-205ENST00000531042 CDH5P33151 784 aaPredicted RBP16.24■□□□□ 0.19
CPSF1-205ENST00000531042 DRD3P35462 400 aa16.24■□□□□ 0.19
CPSF1-205ENST00000531042 GGCXP38435 758 aa16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms