RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 APOL6Q9BWW8 343 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 TRABDQ9H4I3 376 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 DHX35Q9H5Z1 703 aaKnown RBP5.74□□□□□ -1.49
PCF11-205ENST00000530906 CSNK1G1Q9HCP0 422 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 KCNK9Q9NPC2 374 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 FZD10Q9ULW2 581 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 ST3GAL5Q9UNP4 418 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 ARL2BPQ9Y2Y0 163 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 USP15Q9Y4E8 981 aaPredicted RBP5.74□□□□□ -1.49
PCF11-205ENST00000530906 HES2Q9Y543 173 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 TEX264Q9Y6I9 313 aa5.74□□□□□ -1.49
PCF11-205ENST00000530906 TRIP12Q14669 1992 aaPredicted RBP5.74□□□□□ -1.49
PCF11-205ENST00000530906 A0A0U1RQF3 1178 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 CFAP73A6NFT4 308 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 CCT8L1PA6NM43 557 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 FAM155AB1AL88 458 aaPredicted RBP5.73□□□□□ -1.49
PCF11-205ENST00000530906 KBTBD13C9JR72 458 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 KCNN4O15554 427 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 SNX3O60493 162 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 DGKIO75912 1065 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 ATP5HO75947 161 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 KRT38O76015 456 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 TMEM63AO94886 807 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 ASMTLO95671 621 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 OAS1P00973 400 aaKnown RBP5.73□□□□□ -1.49
PCF11-205ENST00000530906 IL1BP01584 269 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 ATP5BP06576 529 aaKnown RBP5.73□□□□□ -1.49
PCF11-205ENST00000530906 INHBAP08476 426 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 PDGFRBP09619 1106 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 ZSCAN5DPP0CG00 497 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 FGFR1P11362 822 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 ALADP13716 330 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 CCDC130P13994 396 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 PRKCHP24723 683 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 HOXD10P28358 340 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 GCAP28676 217 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 ALDH3A1P30838 453 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 SERPINB6P35237 376 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 SKIV2L2P42285 1042 aaKnown RBP5.73□□□□□ -1.49
PCF11-205ENST00000530906 PSMC4P43686 418 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 SULT1E1P49888 294 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 DAOAP59103 153 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 GPX6P59796 221 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 COG7P83436 770 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 ZNF200P98182 395 aaPredicted RBP5.73□□□□□ -1.49
PCF11-205ENST00000530906 BEX3Q00994 111 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 SOX4Q06945 474 aaPredicted RBP5.73□□□□□ -1.49
PCF11-205ENST00000530906 ACTN3Q08043 901 aaPredicted RBP5.73□□□□□ -1.49
PCF11-205ENST00000530906 ADCY1Q08828 1119 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 ADIGQ0VDE8 80 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 ILF2Q12905 390 aaKnown RBP5.73□□□□□ -1.49
PCF11-205ENST00000530906 IFT88Q13099 833 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 MTA1Q13330 715 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 TUSC3Q13454 348 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 DSC3Q14574 896 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 PAFAH1B3Q15102 231 aaKnown RBP5.73□□□□□ -1.49
PCF11-205ENST00000530906 PRKD1Q15139 912 aaPredicted RBP5.73□□□□□ -1.49
PCF11-205ENST00000530906 PDK4Q16654 411 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 CDO1Q16878 200 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 SKIDA1Q1XH10 827 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 BBS9Q3SYG4 887 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 PPP6R3Q5H9R7 873 aaPredicted RBP5.73□□□□□ -1.49
PCF11-205ENST00000530906 WSCD1Q658N2 575 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 PM20D1Q6GTS8 502 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 FAM117BQ6P1L5 589 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 DSTYKQ6XUX3 929 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 CLEC20AQ6ZU45 233 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 ZC3H18Q86VM9 953 aaKnown RBP5.73□□□□□ -1.49
PCF11-205ENST00000530906 SLC26A11Q86WA9 606 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 LRRC6Q86X45 466 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 DTX1Q86Y01 620 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 FBXO36Q8NEA4 188 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 KLHDC9Q8NEP7 349 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 UHMK1Q8TAS1 419 aaKnown RBP5.73□□□□□ -1.49
PCF11-205ENST00000530906 RAB3IL1Q8TBN0 382 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 MDM1Q8TC05 714 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 DENND1AQ8TEH3 1009 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 TFB1MQ8WVM0 346 aaKnown RBP5.73□□□□□ -1.49
PCF11-205ENST00000530906 SLC44A1Q8WWI5 657 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 CCT6BQ92526 530 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 CLP1Q92989 425 aaKnown RBP5.73□□□□□ -1.49
PCF11-205ENST00000530906 FAM149B1Q96BN6 582 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 ZBTB9Q96C00 473 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 PIWIL1Q96J94 861 aaKnown RBP5.73□□□□□ -1.49
PCF11-205ENST00000530906 SPATA13Q96N96 652 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 TGS1Q96RS0 853 aaKnown RBP5.73□□□□□ -1.49
PCF11-205ENST00000530906 PAFAH2Q99487 392 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 PRMT1Q99873 361 aaKnown RBP5.73□□□□□ -1.49
PCF11-205ENST00000530906 FAM83CQ9BQN1 747 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 VPS11Q9H270 941 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 DPEP3Q9H4B8 488 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 XPNPEP3Q9NQH7 507 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 KRT82Q9NSB4 513 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 ETNK2Q9NVF9 386 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 HAUS2Q9NVX0 235 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 MTMR10Q9NXD2 777 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 DDX43Q9NXZ2 648 aaKnown RBP5.73□□□□□ -1.49
PCF11-205ENST00000530906 DONSONQ9NYP3 566 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 FNIP2Q9P278 1114 aa5.73□□□□□ -1.49
PCF11-205ENST00000530906 NME7Q9Y5B8 376 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms