RNA–Protein interactions for RNA: ENST00000530395.1

SMPD1-204, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 5

Gene SMPD1, Length 447 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-204ENST00000530395 BPIFB4P59827 614 aa21.55■■□□□ 1.04
SMPD1-204ENST00000530395 OLFML1Q6UWY5 402 aa21.55■■□□□ 1.04
SMPD1-204ENST00000530395 CIR1Q86X95 450 aaPredicted RBP21.55■■□□□ 1.04
SMPD1-204ENST00000530395 ADAMTS14Q8WXS8 1223 aa21.55■■□□□ 1.04
SMPD1-204ENST00000530395 RPL10LQ96L21 214 aaKnown RBP21.55■■□□□ 1.04
SMPD1-204ENST00000530395 CDC6Q99741 560 aa21.55■■□□□ 1.04
SMPD1-204ENST00000530395 PDCL3Q9H2J4 239 aa21.55■■□□□ 1.04
SMPD1-204ENST00000530395 NDST4Q9H3R1 872 aa21.55■■□□□ 1.04
SMPD1-204ENST00000530395 SIX2Q9NPC8 291 aa21.55■■□□□ 1.04
SMPD1-204ENST00000530395 ADAMTS1Q9UHI8 967 aa21.55■■□□□ 1.04
SMPD1-204ENST00000530395 AJAP1Q9UKB5 411 aaPredicted RBP21.55■■□□□ 1.04
SMPD1-204ENST00000530395 C5AR1P21730 350 aa21.54■■□□□ 1.04
SMPD1-204ENST00000530395 NOS2P35228 1153 aa21.54■■□□□ 1.04
SMPD1-204ENST00000530395 STK19P49842 368 aaPredicted RBP21.54■■□□□ 1.04
SMPD1-204ENST00000530395 CCT8P50990 548 aa21.54■■□□□ 1.04
SMPD1-204ENST00000530395 PLK1P53350 603 aa21.54■■□□□ 1.04
SMPD1-204ENST00000530395 GALCP54803 685 aa21.54■■□□□ 1.04
SMPD1-204ENST00000530395 C21orf59P57076 290 aa21.54■■□□□ 1.04
SMPD1-204ENST00000530395 SLC6A3Q01959 620 aa21.54■■□□□ 1.04
SMPD1-204ENST00000530395 NME3Q13232 169 aa21.54■■□□□ 1.04
SMPD1-204ENST00000530395 ELAVL3Q14576 367 aaKnown RBP21.54■■□□□ 1.04
SMPD1-204ENST00000530395 VWA3BQ502W6 1294 aa21.54■■□□□ 1.04
SMPD1-204ENST00000530395 NCEH1Q6PIU2 408 aa21.54■■□□□ 1.04
SMPD1-204ENST00000530395 SND1Q7KZF4 910 aaKnown RBP eCLIP21.54■■□□□ 1.046e-6■■□□□ 12.6
SMPD1-204ENST00000530395 SLC26A9Q7LBE3 791 aa21.54■■□□□ 1.04
SMPD1-204ENST00000530395 SLC47A2Q86VL8 602 aa21.54■■□□□ 1.04
SMPD1-204ENST00000530395 ZDHHC17Q8IUH5 632 aa21.54■■□□□ 1.04
SMPD1-204ENST00000530395 OR2T34Q8NGX1 318 aa21.54■■□□□ 1.04
SMPD1-204ENST00000530395 RHBDD1Q8TEB9 315 aa21.54■■□□□ 1.04
SMPD1-204ENST00000530395 IGSF8Q969P0 613 aa21.54■■□□□ 1.04
SMPD1-204ENST00000530395 SKA1Q96BD8 255 aa21.54■■□□□ 1.04
SMPD1-204ENST00000530395 ACE2Q9BYF1 805 aaPredicted RBP21.54■■□□□ 1.04
SMPD1-204ENST00000530395 NEUROG2Q9H2A3 272 aa21.54■■□□□ 1.04
SMPD1-204ENST00000530395 RRN3Q9NYV6 651 aa21.54■■□□□ 1.04
SMPD1-204ENST00000530395 SERGEFQ9UGK8 458 aa21.54■■□□□ 1.04
SMPD1-204ENST00000530395 SLC25A13Q9UJS0 675 aa21.54■■□□□ 1.04
SMPD1-204ENST00000530395 DMXL2Q8TDJ6 3036 aa21.54■■□□□ 1.04
SMPD1-204ENST00000530395 FREM2Q5SZK8 3169 aa21.54■■□□□ 1.04
SMPD1-204ENST00000530395 FAM208BQ5VWN6 2430 aa21.54■■□□□ 1.04
SMPD1-204ENST00000530395 A0A1W2PPC4 97 aa21.53■■□□□ 1.04
SMPD1-204ENST00000530395 FOXN3O00409 490 aaPredicted RBP21.53■■□□□ 1.04
SMPD1-204ENST00000530395 IL1BP01584 269 aa21.53■■□□□ 1.04
SMPD1-204ENST00000530395 ERBB2P04626 1255 aa21.53■■□□□ 1.04
SMPD1-204ENST00000530395 GOT1P17174 413 aa21.53■■□□□ 1.04
SMPD1-204ENST00000530395 CLCN1P35523 988 aa21.53■■□□□ 1.04
SMPD1-204ENST00000530395 RACK1P63244 317 aaKnown RBP21.53■■□□□ 1.04
SMPD1-204ENST00000530395 AUHQ13825 339 aaKnown RBP21.53■■□□□ 1.04
SMPD1-204ENST00000530395 PTPN20Q4JDL3 420 aa21.53■■□□□ 1.04
SMPD1-204ENST00000530395 FBXL22Q6P050 247 aa21.53■■□□□ 1.04
SMPD1-204ENST00000530395 FAM71AQ8IYT1 594 aa21.53■■□□□ 1.04
SMPD1-204ENST00000530395 STK40Q8N2I9 435 aa21.53■■□□□ 1.04
SMPD1-204ENST00000530395 ZNF397Q8NF99 534 aaPredicted RBP21.53■■□□□ 1.04
SMPD1-204ENST00000530395 PTPRN2Q92932 1015 aa21.53■■□□□ 1.04
SMPD1-204ENST00000530395 FAM129BQ96TA1 746 aa21.53■■□□□ 1.04
SMPD1-204ENST00000530395 TUBGCP2Q9BSJ2 902 aa21.53■■□□□ 1.04
SMPD1-204ENST00000530395 VANGL2Q9ULK5 521 aa21.53■■□□□ 1.04
SMPD1-204ENST00000530395 TPX2Q9ULW0 747 aaKnown RBP21.53■■□□□ 1.04
SMPD1-204ENST00000530395 ANKRD11Q6UB99 2663 aaPredicted RBP21.53■■□□□ 1.04
SMPD1-204ENST00000530395 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.52■■□□□ 1.04
SMPD1-204ENST00000530395 M0QYT0 321 aa21.52■■□□□ 1.04
SMPD1-204ENST00000530395 DFNA5O60443 496 aa21.52■■□□□ 1.04
SMPD1-204ENST00000530395 PNMA6AP0CW24 399 aaPredicted RBP21.52■■□□□ 1.04
SMPD1-204ENST00000530395 MZF1P28698 734 aaPredicted RBP21.52■■□□□ 1.04
SMPD1-204ENST00000530395 ERCC5P28715 1186 aaPredicted RBP21.52■■□□□ 1.04
SMPD1-204ENST00000530395 CTSKP43235 329 aa21.52■■□□□ 1.04
SMPD1-204ENST00000530395 CENPCQ03188 943 aa21.52■■□□□ 1.04
SMPD1-204ENST00000530395 ZNF177Q13360 481 aaPredicted RBP21.52■■□□□ 1.04
SMPD1-204ENST00000530395 RAPGEF1Q13905 1077 aa21.52■■□□□ 1.04
SMPD1-204ENST00000530395 INAVAQ3KP66 663 aa21.52■■□□□ 1.04
SMPD1-204ENST00000530395 DPCR1Q3MIW9 517 aa21.52■■□□□ 1.04
SMPD1-204ENST00000530395 CXorf57Q6NSI4 855 aaKnown RBP21.52■■□□□ 1.04
SMPD1-204ENST00000530395 LAYNQ6UX15 382 aa21.52■■□□□ 1.04
SMPD1-204ENST00000530395 DBX2Q6ZNG2 339 aa21.52■■□□□ 1.04
SMPD1-204ENST00000530395 DSG4Q86SJ6 1040 aa21.52■■□□□ 1.04
SMPD1-204ENST00000530395 PNPLA1Q8N8W4 532 aa21.52■■□□□ 1.04
SMPD1-204ENST00000530395 TMEM35BQ8NCS4 154 aa21.52■■□□□ 1.04
SMPD1-204ENST00000530395 BAHD1Q8TBE0 780 aaPredicted RBP21.52■■□□□ 1.04
SMPD1-204ENST00000530395 SPAG5Q96R06 1193 aa21.52■■□□□ 1.04
SMPD1-204ENST00000530395 ORAI3Q9BRQ5 295 aa21.52■■□□□ 1.04
SMPD1-204ENST00000530395 STAP1Q9ULZ2 295 aa21.52■■□□□ 1.04
SMPD1-204ENST00000530395 PAXBP1Q9Y5B6 917 aa21.52■■□□□ 1.04
SMPD1-204ENST00000530395 PKD1L2Q7Z442 2459 aa21.52■■□□□ 1.04
SMPD1-204ENST00000530395 PES1O00541 588 aaKnown RBP21.51■■□□□ 1.03
SMPD1-204ENST00000530395 PAGE1O75459 146 aa21.51■■□□□ 1.03
SMPD1-204ENST00000530395 CLDN11O75508 207 aa21.51■■□□□ 1.03
SMPD1-204ENST00000530395 GRK6P43250 576 aa21.51■■□□□ 1.03
SMPD1-204ENST00000530395 NUMBP49757 651 aa21.51■■□□□ 1.03
SMPD1-204ENST00000530395 CCR5P51681 352 aa21.51■■□□□ 1.03
SMPD1-204ENST00000530395 AADATQ8N5Z0 425 aa21.51■■□□□ 1.03
SMPD1-204ENST00000530395 OR14C36Q8NHC7 312 aa21.51■■□□□ 1.03
SMPD1-204ENST00000530395 SLC6A18Q96N87 628 aa21.51■■□□□ 1.03
SMPD1-204ENST00000530395 NUP62CLQ9H1M0 184 aa21.51■■□□□ 1.03
SMPD1-204ENST00000530395 PLCB1Q9NQ66 1216 aa21.51■■□□□ 1.03
SMPD1-204ENST00000530395 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP21.51■■□□□ 1.03
SMPD1-204ENST00000530395 HS3ST4Q9Y661 456 aa21.51■■□□□ 1.03
SMPD1-204ENST00000530395 DSPP15924 2871 aaKnown RBP21.51■■□□□ 1.03
SMPD1-204ENST00000530395 PTPRBP23467 1997 aa21.5■■□□□ 1.03
SMPD1-204ENST00000530395 H0Y8X5 98 aa21.5■■□□□ 1.03
SMPD1-204ENST00000530395 VILLO15195 856 aa21.5■■□□□ 1.03
SMPD1-204ENST00000530395 PCDHGA12O60330 932 aa21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms