RNA–Protein interactions for RNA: ENST00000530008.1

CAPRIN1-208, Transcript of cell cycle associated protein 1, humanhuman

TSL 4

Gene CAPRIN1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-208ENST00000530008 MAFAQ8NHW3 353 aaPredicted RBP6.9□□□□□ -1.3
CAPRIN1-208ENST00000530008 SLC25A43Q8WUT9 341 aaPredicted RBP6.9□□□□□ -1.3
CAPRIN1-208ENST00000530008 KLHL29Q96CT2 875 aa6.9□□□□□ -1.3
CAPRIN1-208ENST00000530008 FEM1CQ96JP0 617 aa6.9□□□□□ -1.3
CAPRIN1-208ENST00000530008 AIFM2Q9BRQ8 373 aa6.9□□□□□ -1.3
CAPRIN1-208ENST00000530008 SFXN1Q9H9B4 322 aa6.9□□□□□ -1.3
CAPRIN1-208ENST00000530008 DUSP22Q9NRW4 184 aa6.9□□□□□ -1.3
CAPRIN1-208ENST00000530008 PASKQ96RG2 1323 aa6.9□□□□□ -1.3
CAPRIN1-208ENST00000530008 LIPT2A6NK58 231 aa6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 LDLRAD4O15165 306 aa6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 MPPED1O15442 326 aa6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 PGM3O95394 542 aa6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 CHRM4P08173 479 aa6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 ALDOCP09972 364 aaKnown RBP6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 FPR3P25089 353 aa6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 NDUFS1P28331 727 aa6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 CYP2C18P33260 490 aa6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 PSMB10P40306 273 aa6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 FOLR3P41439 243 aa6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 STAT6P42226 847 aa6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 CPA2P48052 419 aa6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 CFHR3Q02985 330 aa6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 EPS8Q12929 822 aa6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 IL13RA2Q14627 380 aa6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 PRKD1Q15139 912 aaPredicted RBP6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 MED22Q15528 200 aa6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 TIGD2Q4W5G0 525 aa6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 ZNF667Q5HYK9 610 aa6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 PLAC9Q5JTB6 97 aa6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 SLC30A6Q6NXT4 461 aa6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 RRM2BQ7LG56 351 aa6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 WDR53Q7Z5U6 358 aaPredicted RBP6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 C2CD4CQ8TF44 421 aa6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 SCFD2Q8WU76 684 aa6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 KAZALD1Q96I82 304 aa6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 TXLNGYQ9BZA5 131 aa6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 DEF6Q9H4E7 631 aa6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 ERVK-5Q9HDB9 667 aa6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 PARPBPQ9NWS1 579 aa6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 CEP72Q9P209 647 aa6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 GIMAP2Q9UG22 337 aa6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 TCAF1Q9Y4C2 921 aa6.89□□□□□ -1.31
CAPRIN1-208ENST00000530008 CENPVL1A0A0U1RR11 272 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 C16orf96A6NNT2 1141 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 C17orf100A8MU93 164 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 TTC34A8MYJ7 566 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 DSCR3O14972 297 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 DKC1O60832 514 aaKnown RBP eCLIP6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 ITGB3P05106 788 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 NPSP0C0P6 89 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 EGR2P11161 476 aaPredicted RBP6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 HOXB9P17482 250 aaPredicted RBP6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 IL11P20809 199 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 SFPQP23246 707 aaKnown RBP eCLIP6.88□□□□□ -1.315e-6■□□□□ 11.2
CAPRIN1-208ENST00000530008 GJC1P36383 396 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 SELENOPP49908 381 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 TERF1P54274 439 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 WDR5P61964 334 aaKnown RBP6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 TMEM115Q12893 351 aaPredicted RBP6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 CNGA3Q16281 694 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 SLC18A3Q16572 532 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 C1QTNF12Q5T7M4 302 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 ZKSCAN2Q63HK3 967 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 KIAA0895LQ68EN5 471 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 TMEM81Q6P7N7 255 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 CYP20A1Q6UW02 462 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 RNF144BQ7Z419 303 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 TMEM200AQ86VY9 491 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 ULK2Q8IYT8 1036 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 TAGAPQ8N103 731 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 NKAIN3Q8N8D7 197 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 CCDC191Q8NCU4 936 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 TFAP2BQ92481 460 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 KLHL15Q96M94 604 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 Q96MF0 132 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 ZMAT2Q96NC0 199 aaKnown RBP6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 GPR78Q96P69 363 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 YME1L1Q96TA2 773 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 THAP7Q9BT49 309 aaPredicted RBP6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 FSD1LQ9BXM9 530 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 ADGRE3Q9BY15 652 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 SH3GLB2Q9NR46 395 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 SERTAD4Q9NUC0 356 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 IL1RAPL1Q9NZN1 696 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 SEMA5BQ9P283 1151 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 ANKFY1Q9P2R3 1169 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 SLCO3A1Q9UIG8 710 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 ADAMTS5Q9UNA0 930 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 PKP3Q9Y446 797 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 ADAMTS20P59510 1910 aa6.88□□□□□ -1.31
CAPRIN1-208ENST00000530008 PRYO14603 147 aa6.87□□□□□ -1.31
CAPRIN1-208ENST00000530008 FYB1O15117 783 aa6.87□□□□□ -1.31
CAPRIN1-208ENST00000530008 BEST1O76090 585 aa6.87□□□□□ -1.31
CAPRIN1-208ENST00000530008 CD72P21854 359 aa6.87□□□□□ -1.31
CAPRIN1-208ENST00000530008 GSTM2P28161 218 aa6.87□□□□□ -1.31
CAPRIN1-208ENST00000530008 PPARGP37231 505 aaPredicted RBP6.87□□□□□ -1.31
CAPRIN1-208ENST00000530008 PBX3P40426 434 aa6.87□□□□□ -1.31
CAPRIN1-208ENST00000530008 COPB1P53618 953 aaKnown RBP6.87□□□□□ -1.31
CAPRIN1-208ENST00000530008 CALD1Q05682 793 aaKnown RBP6.87□□□□□ -1.31
CAPRIN1-208ENST00000530008 ERCC6LQ2NKX8 1250 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms