RNA–Protein interactions for RNA: ENST00000529986.5

CTNND1-223, Transcript of catenin delta 1, human

TSL 1 (best) BASIC

Gene CTNND1, Length 5,727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNND1-223	ENST00000529986	CYP7B1	O75881	506 aa		7.77	□□□□□ -1.17
CTNND1-223	ENST00000529986	STAU1	O95793	577 aa	Known RBP	7.77	□□□□□ -1.17
CTNND1-223	ENST00000529986	HIRA	P54198	1017 aa	Predicted RBP	7.77	□□□□□ -1.17
CTNND1-223	ENST00000529986	USP4	Q13107	963 aa		7.77	□□□□□ -1.17
CTNND1-223	ENST00000529986	CDC42EP5	Q6NZY7	148 aa		7.77	□□□□□ -1.17
CTNND1-223	ENST00000529986	ARPIN	Q7Z6K5	226 aa		7.77	□□□□□ -1.17
CTNND1-223	ENST00000529986	ABRA	Q8N0Z2	381 aa		7.77	□□□□□ -1.17
CTNND1-223	ENST00000529986	METTL6	Q8TCB7	284 aa		7.77	□□□□□ -1.17
CTNND1-223	ENST00000529986	CLPB	Q9H078	707 aa		7.77	□□□□□ -1.17
CTNND1-223	ENST00000529986	GGA2	Q9UJY4	613 aa		7.77	□□□□□ -1.17
CTNND1-223	ENST00000529986	DMTF1	Q9Y222	760 aa		7.77	□□□□□ -1.17
CTNND1-223	ENST00000529986	SLC9A8	Q9Y2E8	581 aa		7.77	□□□□□ -1.17
CTNND1-223	ENST00000529986	SPATA31A6	Q5VVP1	1343 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	FOXO6	A8MYZ6	492 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	DYNC1LI2	O43237	492 aa	Predicted RBP	7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	ATP6V1G1	O75348	118 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	NADK	O95544	446 aa	Predicted RBP	7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	CNP	P09543	421 aa	Known RBP	7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	VDR	P11473	427 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	PGAM1	P18669	254 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	NR4A1	P22736	598 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	RBL1	P28749	1068 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	MARCKSL1	P49006	195 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	NAGLU	P54802	743 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	PSME3	P61289	254 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	PRKCQ	Q04759	706 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	CYP24A1	Q07973	514 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	LPIN1	Q14693	890 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	QPRT	Q15274	297 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	MTX3	Q5HYI7	312 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	DENND5A	Q6IQ26	1287 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	NPNT	Q6UXI9	565 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	ZNF621	Q6ZSS3	439 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	TCAIM	Q8N3R3	496 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	RCN3	Q96D15	328 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	SEMA4B	Q9NPR2	832 aa	Predicted RBP	7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	NYAP2	Q9P242	653 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	VPS9D1	Q9Y2B5	631 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	SPATA31A1	Q5TZJ5	1347 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986		A0A1W2PPM1	405 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	EPHB6	O15197	1021 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	TMCC2	O75069	709 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	FYN	P06241	537 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	SP100	P23497	879 aa	Predicted RBP	7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	NEK3	P51956	506 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	DPYSL3	Q14195	570 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	FRG1	Q14331	258 aa	Known RBP	7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	NTRK3	Q16288	839 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	IQSEC1	Q6DN90	963 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	MZT2B	Q6NZ67	158 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	ILDR2	Q71H61	639 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	CYP4Z2P	Q8N1L4	340 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	ZNF671	Q8TAW3	534 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	CPNE1	Q99829	537 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	ANKEF1	Q9NU02	776 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	COG5	Q9UP83	839 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	PRKAB1	Q9Y478	270 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	STK25	O00506	426 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	IFNA14	P01570	189 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	UQCRB	P14927	111 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	FOSL2	P15408	326 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	LBP	P18428	481 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	NOS3	P29474	1203 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	ADAM17	P78536	824 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	PDK4	Q16654	411 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	MILR1	Q7Z6M3	343 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	FAM47B	Q8NA70	645 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	TMC2	Q8TDI7	906 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	TUBA8	Q9NY65	449 aa	Predicted RBP	7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	EGFL7	Q9UHF1	273 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	TDRKH	Q9Y2W6	561 aa	Known RBP	7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	STON1	Q9Y6Q2	735 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	RICTOR	Q6R327	1708 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986		A0A0B4J269	797 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986		F8VP50	259 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	PSIP1	O75475	530 aa	Known RBP	7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	NTSR2	O95665	410 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	CYP2C8	P10632	490 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	CYP4B1	P13584	511 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	DARS	P14868	501 aa	Known RBP	7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	TTK	P33981	857 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	HARS2	P49590	506 aa	Known RBP	7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	SCNN1B	P51168	640 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	ST8SIA6	P61647	398 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	SPIRE1	Q08AE8	756 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	ZNF846	Q147U1	533 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	NT5DC1	Q5TFE4	455 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	PAGE2	Q7Z2X7	111 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	AMER2	Q8N7J2	671 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	GLIS3	Q8NEA6	775 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	BAP1	Q92560	729 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	VMP1	Q96GC9	406 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	CLK4	Q9HAZ1	481 aa	Known RBP	7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	CDHR5	Q9HBB8	845 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	PNPLA3	Q9NST1	481 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	FBXO28	Q9NVF7	368 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	LSM7	Q9UK45	103 aa	Known RBP	7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	PCDHB8	Q9UN66	801 aa		7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	DRG1	Q9Y295	367 aa	Known RBP	7.76	□□□□□ -1.17
CTNND1-223	ENST00000529986	CRYL1	Q9Y2S2	319 aa		7.76	□□□□□ -1.17

Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms