RNA–Protein interactions for RNA: ENST00000529355.1

CTR9-204, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene CTR9, Length 1,146 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-204ENST00000529355 NFATC1O95644 943 aa5.13□□□□□ -1.59
CTR9-204ENST00000529355 TFRCP02786 760 aaKnown RBP5.13□□□□□ -1.59
CTR9-204ENST00000529355 CD63P08962 238 aa5.13□□□□□ -1.59
CTR9-204ENST00000529355 PRF1P14222 555 aa5.13□□□□□ -1.59
CTR9-204ENST00000529355 TFEBP19484 476 aa5.13□□□□□ -1.59
CTR9-204ENST00000529355 CNTFP26441 200 aa5.13□□□□□ -1.59
CTR9-204ENST00000529355 TYK2P29597 1187 aa5.13□□□□□ -1.59
CTR9-204ENST00000529355 RHAGQ02094 409 aa5.13□□□□□ -1.59
CTR9-204ENST00000529355 ID2Q02363 134 aa5.13□□□□□ -1.59
CTR9-204ENST00000529355 RBMS2Q15434 407 aaKnown RBP5.13□□□□□ -1.59
CTR9-204ENST00000529355 GLE1Q53GS7 698 aaKnown RBP5.13□□□□□ -1.59
CTR9-204ENST00000529355 UBAP2Q5T6F2 1119 aaKnown RBP5.13□□□□□ -1.59
CTR9-204ENST00000529355 C10orf25Q5T742 122 aa5.13□□□□□ -1.59
CTR9-204ENST00000529355 ASPHD1Q5U4P2 390 aa5.13□□□□□ -1.59
CTR9-204ENST00000529355 SHC4Q6S5L8 630 aa5.13□□□□□ -1.59
CTR9-204ENST00000529355 ZNF793Q6ZN11 406 aa5.13□□□□□ -1.59
CTR9-204ENST00000529355 B4GALNT4Q76KP1 1039 aa5.13□□□□□ -1.59
CTR9-204ENST00000529355 FSIP1Q8NA03 581 aa5.13□□□□□ -1.59
CTR9-204ENST00000529355 ADPRHL1Q8NDY3 354 aa5.13□□□□□ -1.59
CTR9-204ENST00000529355 ZNF548Q8NEK5 533 aaPredicted RBP5.13□□□□□ -1.59
CTR9-204ENST00000529355 KAT2BQ92831 832 aa5.13□□□□□ -1.59
CTR9-204ENST00000529355 SCLT1Q96NL6 688 aa5.13□□□□□ -1.59
CTR9-204ENST00000529355 TRIM31Q9BZY9 425 aa5.13□□□□□ -1.59
CTR9-204ENST00000529355 CTDSP1Q9GZU7 261 aa5.13□□□□□ -1.59
CTR9-204ENST00000529355 Q9N2J8 555 aa5.13□□□□□ -1.59
CTR9-204ENST00000529355 HDAC6Q9UBN7 1215 aa5.13□□□□□ -1.59
CTR9-204ENST00000529355 ZNF70Q9UC06 446 aaPredicted RBP5.13□□□□□ -1.59
CTR9-204ENST00000529355 DERAQ9Y315 318 aa5.13□□□□□ -1.59
CTR9-204ENST00000529355 A6NNC1 897 aa5.12□□□□□ -1.59
CTR9-204ENST00000529355 ZNF814B7Z6K7 855 aa5.12□□□□□ -1.59
CTR9-204ENST00000529355 IRAK2O43187 625 aa5.12□□□□□ -1.59
CTR9-204ENST00000529355 EIF3JO75822 258 aaKnown RBP5.12□□□□□ -1.59
CTR9-204ENST00000529355 NEURL1O76050 574 aa5.12□□□□□ -1.59
CTR9-204ENST00000529355 PKMP14618 531 aaKnown RBP5.12□□□□□ -1.59
CTR9-204ENST00000529355 CPA1P15085 419 aa5.12□□□□□ -1.59
CTR9-204ENST00000529355 ZNF81P51508 661 aa5.12□□□□□ -1.59
CTR9-204ENST00000529355 RPS13P62277 151 aaKnown RBP5.12□□□□□ -1.59
CTR9-204ENST00000529355 MTX1Q13505 466 aa5.12□□□□□ -1.59
CTR9-204ENST00000529355 TRIP6Q15654 476 aaKnown RBP5.12□□□□□ -1.59
CTR9-204ENST00000529355 ADCK5Q3MIX3 580 aa5.12□□□□□ -1.59
CTR9-204ENST00000529355 ODF3L2Q3SX64 289 aa5.12□□□□□ -1.59
CTR9-204ENST00000529355 FBXO47Q5MNV8 452 aa5.12□□□□□ -1.59
CTR9-204ENST00000529355 SH2D4BQ5SQS7 431 aa5.12□□□□□ -1.59
CTR9-204ENST00000529355 NUGGCQ68CJ6 796 aa5.12□□□□□ -1.59
CTR9-204ENST00000529355 TTLL5Q6EMB2 1281 aa5.12□□□□□ -1.59
CTR9-204ENST00000529355 ANO7Q6IWH7 933 aa5.12□□□□□ -1.59
CTR9-204ENST00000529355 C11orf87Q6NUJ2 197 aa5.12□□□□□ -1.59
CTR9-204ENST00000529355 RFX8Q6ZV50 586 aa5.12□□□□□ -1.59
CTR9-204ENST00000529355 UBE2Q1Q7Z7E8 422 aa5.12□□□□□ -1.59
CTR9-204ENST00000529355 GPSM1Q86YR5 675 aa5.12□□□□□ -1.59
CTR9-204ENST00000529355 TMEM57Q8N5G2 664 aa5.12□□□□□ -1.59
CTR9-204ENST00000529355 NANOGP1Q8N7R0 232 aa5.12□□□□□ -1.59
CTR9-204ENST00000529355 NRACQ8N912 160 aa5.12□□□□□ -1.59
CTR9-204ENST00000529355 RPL36ALQ969Q0 106 aaKnown RBP5.12□□□□□ -1.59
CTR9-204ENST00000529355 SDCCAG3Q96C92 435 aa5.12□□□□□ -1.59
CTR9-204ENST00000529355 RRN3Q9NYV6 651 aa5.12□□□□□ -1.59
CTR9-204ENST00000529355 MSRB1Q9NZV6 116 aa5.12□□□□□ -1.59
CTR9-204ENST00000529355 SLC25A13Q9UJS0 675 aa5.12□□□□□ -1.59
CTR9-204ENST00000529355 COG5Q9UP83 839 aa5.12□□□□□ -1.59
CTR9-204ENST00000529355 LAMP3Q9UQV4 416 aa5.12□□□□□ -1.59
CTR9-204ENST00000529355 A0A0A0MQY5 61 aa5.11□□□□□ -1.59
CTR9-204ENST00000529355 KCNJ18B7U540 433 aa5.11□□□□□ -1.59
CTR9-204ENST00000529355 SYN3O14994 580 aa5.11□□□□□ -1.59
CTR9-204ENST00000529355 HNRNPRO43390 633 aaKnown RBP5.11□□□□□ -1.59
CTR9-204ENST00000529355 PYGLP06737 847 aa5.11□□□□□ -1.59
CTR9-204ENST00000529355 POLBP06746 335 aa5.11□□□□□ -1.59
CTR9-204ENST00000529355 CHRNB1P11230 501 aa5.11□□□□□ -1.59
CTR9-204ENST00000529355 CIITAP33076 1130 aa5.11□□□□□ -1.59
CTR9-204ENST00000529355 PPM1FP49593 454 aaPredicted RBP5.11□□□□□ -1.59
CTR9-204ENST00000529355 SLC12A2P55011 1212 aa5.11□□□□□ -1.59
CTR9-204ENST00000529355 ALKBH1Q13686 389 aaKnown RBP5.11□□□□□ -1.59
CTR9-204ENST00000529355 SMTNL2Q2TAL5 461 aa5.11□□□□□ -1.59
CTR9-204ENST00000529355 C10orf76Q5T2E6 689 aa5.11□□□□□ -1.59
CTR9-204ENST00000529355 ANKRD45Q5TZF3 282 aa5.11□□□□□ -1.59
CTR9-204ENST00000529355 ZNF425Q6IV72 752 aa5.11□□□□□ -1.59
CTR9-204ENST00000529355 HMBOX1Q6NT76 420 aa5.11□□□□□ -1.59
CTR9-204ENST00000529355 ENDOVQ8N8Q3 282 aaKnown RBP5.11□□□□□ -1.59
CTR9-204ENST00000529355 C16orf52Q8NHV5 167 aa5.11□□□□□ -1.59
CTR9-204ENST00000529355 UBXN10Q96LJ8 280 aa5.11□□□□□ -1.59
CTR9-204ENST00000529355 ZSCAN31Q96LW9 406 aaPredicted RBP5.11□□□□□ -1.59
CTR9-204ENST00000529355 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.11□□□□□ -1.59
CTR9-204ENST00000529355 SPAG4Q9NPE6 437 aa5.11□□□□□ -1.59
CTR9-204ENST00000529355 RIC8AQ9NPQ8 531 aa5.11□□□□□ -1.59
CTR9-204ENST00000529355 ELOVL5Q9NYP7 299 aa5.11□□□□□ -1.59
CTR9-204ENST00000529355 PI4KBQ9UBF8 816 aa5.11□□□□□ -1.59
CTR9-204ENST00000529355 IPO11Q9UI26 975 aaKnown RBP5.11□□□□□ -1.59
CTR9-204ENST00000529355 RHODO00212 210 aa5.1□□□□□ -1.59
CTR9-204ENST00000529355 MSI1O43347 362 aaKnown RBP5.1□□□□□ -1.59
CTR9-204ENST00000529355 DHX16O60231 1041 aaKnown RBP5.1□□□□□ -1.59
CTR9-204ENST00000529355 CNOT3O75175 753 aaKnown RBP5.1□□□□□ -1.59
CTR9-204ENST00000529355 FGF2P09038 288 aa5.1□□□□□ -1.59
CTR9-204ENST00000529355 HOXB9P17482 250 aaPredicted RBP5.1□□□□□ -1.59
CTR9-204ENST00000529355 KLRC2P26717 231 aa5.1□□□□□ -1.59
CTR9-204ENST00000529355 PNPLA4P41247 253 aa5.1□□□□□ -1.59
CTR9-204ENST00000529355 PTPN9P43378 593 aa5.1□□□□□ -1.59
CTR9-204ENST00000529355 MMP13P45452 471 aa5.1□□□□□ -1.59
CTR9-204ENST00000529355 CCR5P51681 352 aa5.1□□□□□ -1.59
CTR9-204ENST00000529355 MVDP53602 400 aa5.1□□□□□ -1.59
CTR9-204ENST00000529355 SLC12A1Q13621 1099 aa5.1□□□□□ -1.59
CTR9-204ENST00000529355 GALNT3Q14435 633 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms