RNA–Protein interactions for RNA: ENST00000529046.5

CSDE1-212, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-212ENST00000529046 TPTEP56180 551 aa5.44□□□□□ -1.54
CSDE1-212ENST00000529046 GPS1Q13098 491 aa5.44□□□□□ -1.54
CSDE1-212ENST00000529046 CHAF1AQ13111 956 aaPredicted RBP5.44□□□□□ -1.54
CSDE1-212ENST00000529046 SPARCL1Q14515 664 aa5.44□□□□□ -1.54
CSDE1-212ENST00000529046 STARD3Q14849 445 aa5.44□□□□□ -1.54
CSDE1-212ENST00000529046 PUM3Q15397 648 aaKnown RBP5.44□□□□□ -1.54
CSDE1-212ENST00000529046 PGBD2Q6P3X8 592 aa5.44□□□□□ -1.54
CSDE1-212ENST00000529046 TLDC1Q6P9B6 456 aa5.44□□□□□ -1.54
CSDE1-212ENST00000529046 FBXO38Q6PIJ6 1188 aa5.44□□□□□ -1.54
CSDE1-212ENST00000529046 ZNF527Q8NB42 609 aa5.44□□□□□ -1.54
CSDE1-212ENST00000529046 ABHD5Q8WTS1 349 aa5.44□□□□□ -1.54
CSDE1-212ENST00000529046 RSC1A1Q92681 617 aa5.44□□□□□ -1.54
CSDE1-212ENST00000529046 DCPSQ96C86 337 aaKnown RBP5.44□□□□□ -1.54
CSDE1-212ENST00000529046 REPS1Q96D71 796 aa5.44□□□□□ -1.54
CSDE1-212ENST00000529046 HELLSQ9NRZ9 838 aa5.44□□□□□ -1.54
CSDE1-212ENST00000529046 CWC25Q9NXE8 425 aaPredicted RBP5.44□□□□□ -1.54
CSDE1-212ENST00000529046 LAS1LQ9Y4W2 734 aaKnown RBP5.44□□□□□ -1.54
CSDE1-212ENST00000529046 CEP83Q9Y592 693 aa5.44□□□□□ -1.54
CSDE1-212ENST00000529046 LAMB2P55268 1798 aa5.44□□□□□ -1.54
CSDE1-212ENST00000529046 TRPM7Q96QT4 1865 aa5.43□□□□□ -1.54
CSDE1-212ENST00000529046 DDX60Q8IY21 1712 aaKnown RBP5.43□□□□□ -1.54
CSDE1-212ENST00000529046 ECE2O60344 883 aa5.43□□□□□ -1.54
CSDE1-212ENST00000529046 CCNT2O60583 730 aaKnown RBP5.43□□□□□ -1.54
CSDE1-212ENST00000529046 IGKV5-2P06315 115 aa5.43□□□□□ -1.54
CSDE1-212ENST00000529046 MYCLP12524 364 aaPredicted RBP5.43□□□□□ -1.54
CSDE1-212ENST00000529046 NPPBP16860 134 aa5.43□□□□□ -1.54
CSDE1-212ENST00000529046 E2F1Q01094 437 aa5.43□□□□□ -1.54
CSDE1-212ENST00000529046 ICA1Q05084 483 aa5.43□□□□□ -1.54
CSDE1-212ENST00000529046 FOXF2Q12947 444 aa5.43□□□□□ -1.54
CSDE1-212ENST00000529046 KCNJ12Q14500 433 aa5.43□□□□□ -1.54
CSDE1-212ENST00000529046 ST3GAL2Q16842 350 aa5.43□□□□□ -1.54
CSDE1-212ENST00000529046 TBC1D25Q3MII6 688 aa5.43□□□□□ -1.54
CSDE1-212ENST00000529046 ZACNQ401N2 412 aa5.43□□□□□ -1.54
CSDE1-212ENST00000529046 AASDHQ4L235 1098 aaPredicted RBP5.43□□□□□ -1.54
CSDE1-212ENST00000529046 FAM90A2PQ658T7 463 aa5.43□□□□□ -1.54
CSDE1-212ENST00000529046 PTCHD4Q6ZW05 846 aa5.43□□□□□ -1.54
CSDE1-212ENST00000529046 MYLK4Q86YV6 388 aaPredicted RBP5.43□□□□□ -1.54
CSDE1-212ENST00000529046 ANKRD18AQ8IVF6 992 aa5.43□□□□□ -1.54
CSDE1-212ENST00000529046 SFTPA1Q8IWL2 248 aa5.43□□□□□ -1.54
CSDE1-212ENST00000529046 CACNA2D3Q8IZS8 1091 aa5.43□□□□□ -1.54
CSDE1-212ENST00000529046 CLASRPQ8N2M8 674 aaKnown RBP5.43□□□□□ -1.54
CSDE1-212ENST00000529046 C8orf58Q8NAV2 365 aa5.43□□□□□ -1.54
CSDE1-212ENST00000529046 ABHD8Q96I13 439 aa5.43□□□□□ -1.54
CSDE1-212ENST00000529046 KAZALD1Q96I82 304 aa5.43□□□□□ -1.54
CSDE1-212ENST00000529046 PAAF1Q9BRP4 392 aa5.43□□□□□ -1.54
CSDE1-212ENST00000529046 GLIS2Q9BZE0 524 aaPredicted RBP5.43□□□□□ -1.54
CSDE1-212ENST00000529046 PTPRHQ9HD43 1115 aa5.43□□□□□ -1.54
CSDE1-212ENST00000529046 NKX1-2Q9UD57 310 aaPredicted RBP5.43□□□□□ -1.54
CSDE1-212ENST00000529046 ADAM21Q9UKJ8 722 aa5.43□□□□□ -1.54
CSDE1-212ENST00000529046 ADAMTS5Q9UNA0 930 aa5.43□□□□□ -1.54
CSDE1-212ENST00000529046 MYO3BQ8WXR4 1341 aa5.43□□□□□ -1.54
CSDE1-212ENST00000529046 PI4KAP2A4QPH2 592 aa5.42□□□□□ -1.54
CSDE1-212ENST00000529046 MANSC4A6NHS7 340 aaPredicted RBP5.42□□□□□ -1.54
CSDE1-212ENST00000529046 F5H423 210 aaPredicted RBP5.42□□□□□ -1.54
CSDE1-212ENST00000529046 PSMD9O00233 223 aa5.42□□□□□ -1.54
CSDE1-212ENST00000529046 SKAP2O75563 359 aaPredicted RBP5.42□□□□□ -1.54
CSDE1-212ENST00000529046 WDR47O94967 919 aa5.42□□□□□ -1.54
CSDE1-212ENST00000529046 FGAP02671 866 aa5.42□□□□□ -1.54
CSDE1-212ENST00000529046 CYP2C18P33260 490 aa5.42□□□□□ -1.54
CSDE1-212ENST00000529046 SERPINF1P36955 418 aa5.42□□□□□ -1.54
CSDE1-212ENST00000529046 CCT8P50990 548 aa5.42□□□□□ -1.54
CSDE1-212ENST00000529046 HUNKP57058 714 aa5.42□□□□□ -1.54
CSDE1-212ENST00000529046 EEFSECP57772 596 aaKnown RBP5.42□□□□□ -1.54
CSDE1-212ENST00000529046 PSG6Q00889 435 aa5.42□□□□□ -1.54
CSDE1-212ENST00000529046 NEXNQ0ZGT2 675 aa5.42□□□□□ -1.54
CSDE1-212ENST00000529046 PFKFB4Q16877 469 aa5.42□□□□□ -1.54
CSDE1-212ENST00000529046 TRIM60Q495X7 471 aa5.42□□□□□ -1.54
CSDE1-212ENST00000529046 ARHGAP15Q53QZ3 475 aa5.42□□□□□ -1.54
CSDE1-212ENST00000529046 FCRLBQ6BAA4 426 aa5.42□□□□□ -1.54
CSDE1-212ENST00000529046 TANGO2Q6ICL3 276 aa5.42□□□□□ -1.54
CSDE1-212ENST00000529046 RGMBQ6NW40 437 aa5.42□□□□□ -1.54
CSDE1-212ENST00000529046 C15orf52Q6ZUT6 534 aaKnown RBP5.42□□□□□ -1.54
CSDE1-212ENST00000529046 ZNF804AQ7Z570 1209 aa5.42□□□□□ -1.54
CSDE1-212ENST00000529046 WDR63Q8IWG1 891 aa5.42□□□□□ -1.54
CSDE1-212ENST00000529046 SRRM1Q8IYB3 904 aaKnown RBP5.42□□□□□ -1.54
CSDE1-212ENST00000529046 LRRC71Q8N4P6 559 aa5.42□□□□□ -1.54
CSDE1-212ENST00000529046 SIRT6Q8N6T7 355 aa5.42□□□□□ -1.54
CSDE1-212ENST00000529046 PI4KAP1Q8N8J0 262 aa5.42□□□□□ -1.54
CSDE1-212ENST00000529046 IPO4Q8TEX9 1081 aaKnown RBP5.42□□□□□ -1.54
CSDE1-212ENST00000529046 HASPINQ8TF76 798 aa5.42□□□□□ -1.54
CSDE1-212ENST00000529046 XAGE5Q8WWM1 108 aa5.42□□□□□ -1.54
CSDE1-212ENST00000529046 MUL1Q969V5 352 aa5.42□□□□□ -1.54
CSDE1-212ENST00000529046 COA1Q9GZY4 146 aa5.42□□□□□ -1.54
CSDE1-212ENST00000529046 TP63Q9H3D4 680 aaPredicted RBP5.42□□□□□ -1.54
CSDE1-212ENST00000529046 DBNDD1Q9H9R9 158 aa5.42□□□□□ -1.54
CSDE1-212ENST00000529046 SEMA5BQ9P283 1151 aa5.42□□□□□ -1.54
CSDE1-212ENST00000529046 AMFRQ9UKV5 643 aa5.42□□□□□ -1.54
CSDE1-212ENST00000529046 MED23Q9ULK4 1368 aa5.42□□□□□ -1.54
CSDE1-212ENST00000529046 LGALS16A8MUM7 142 aa5.41□□□□□ -1.54
CSDE1-212ENST00000529046 UFL1O94874 794 aa5.41□□□□□ -1.54
CSDE1-212ENST00000529046 VIPP01282 170 aa5.41□□□□□ -1.54
CSDE1-212ENST00000529046 CSTBP04080 98 aaKnown RBP5.41□□□□□ -1.54
CSDE1-212ENST00000529046 NPSP0C0P6 89 aa5.41□□□□□ -1.54
CSDE1-212ENST00000529046 FAM163BP0C2L3 166 aa5.41□□□□□ -1.54
CSDE1-212ENST00000529046 NDUFB7P17568 137 aa5.41□□□□□ -1.54
CSDE1-212ENST00000529046 ADRA1DP25100 572 aa5.41□□□□□ -1.54
CSDE1-212ENST00000529046 CCT4P50991 539 aaKnown RBP5.41□□□□□ -1.54
CSDE1-212ENST00000529046 SUMO2P61956 95 aaKnown RBP5.41□□□□□ -1.54
CSDE1-212ENST00000529046 DNASE1L3Q13609 305 aa5.41□□□□□ -1.54
CSDE1-212ENST00000529046 GCKRQ14397 625 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms