RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 PTGIRP43119 386 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 PLA2G4AP47712 749 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 TKTL1P51854 596 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 BCAT1P54687 386 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 PCBP4P57723 403 aaKnown RBP8.84□□□□□ -0.99
SSBP3-212ENST00000528930 RPL6Q02878 288 aaKnown RBP8.84□□□□□ -0.99
SSBP3-212ENST00000528930 BST2Q10589 180 aaKnown RBP8.84□□□□□ -0.99
SSBP3-212ENST00000528930 DHCR24Q15392 516 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 CNGA2Q16280 664 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 MIIPQ5JXC2 388 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 DPY19L2P1Q6NXN4 242 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 GJB7Q6PEY0 223 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 KLHDC10Q6PID8 442 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 RHBDF2Q6PJF5 856 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 LCLAT1Q6UWP7 414 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 SLC36A4Q6YBV0 504 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 GBP6Q6ZN66 633 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 HTR3DQ70Z44 454 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 BHLHA9Q7RTU4 235 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 DDX42Q86XP3 938 aaKnown RBP eCLIP8.84□□□□□ -0.99
SSBP3-212ENST00000528930 RBBP8NLQ8NC74 664 aaPredicted RBP8.84□□□□□ -0.99
SSBP3-212ENST00000528930 SLC35F5Q8WV83 523 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 KCTD13Q8WZ19 329 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 NDRG1Q92597 394 aaKnown RBP8.84□□□□□ -0.99
SSBP3-212ENST00000528930 SPOCK3Q9BQ16 436 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 ULBP1Q9BZM6 244 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 PDCL3Q9H2J4 239 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 SIX2Q9NPC8 291 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 UBE2TQ9NPD8 197 aaPredicted RBP8.84□□□□□ -0.99
SSBP3-212ENST00000528930 RRAGDQ9NQL2 400 aaPredicted RBP8.84□□□□□ -0.99
SSBP3-212ENST00000528930 SAMSN1Q9NSI8 373 aaKnown RBP8.84□□□□□ -0.99
SSBP3-212ENST00000528930 CLIC5Q9NZA1 410 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 SUSD2Q9UGT4 822 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 NAGPAQ9UK23 515 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.84□□□□□ -0.99
SSBP3-212ENST00000528930 FNDC3AQ9Y2H6 1198 aaKnown RBP8.84□□□□□ -0.99
SSBP3-212ENST00000528930 PCDHGA1Q9Y5H4 931 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 MYOFQ9NZM1 2061 aa8.84□□□□□ -0.99
SSBP3-212ENST00000528930 SVILO95425 2214 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 BECN2A8MW95 431 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 K7ENP7 123 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 SLC9A3R1O14745 358 aaPredicted RBP8.83□□□□□ -1
SSBP3-212ENST00000528930 MDM4O15151 490 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 ADAM23O75077 832 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 CER1O95813 267 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 ZBED1O96006 694 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 SETSIPP0DME0 302 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 JUPP14923 745 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 BRD2P25440 801 aaKnown RBP8.83□□□□□ -1
SSBP3-212ENST00000528930 PON1P27169 355 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 MTIF2P46199 727 aaKnown RBP8.83□□□□□ -1
SSBP3-212ENST00000528930 SLC6A11P48066 632 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 SLC8A3P57103 927 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 PTK2Q05397 1052 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 NR1H3Q13133 447 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 TARDBPQ13148 414 aaKnown RBP eCLIP8.83□□□□□ -1
SSBP3-212ENST00000528930 MAN2A1Q16706 1144 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 TPD52L1Q16890 204 aaPredicted RBP8.83□□□□□ -1
SSBP3-212ENST00000528930 VWA3BQ502W6 1294 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 HSP90AA4PQ58FG1 418 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 PMF1Q6P1K2 205 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 INO80CQ6PI98 192 aaPredicted RBP8.83□□□□□ -1
SSBP3-212ENST00000528930 XKR5Q6UX68 686 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 BBS7Q8IWZ6 715 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 SCML4Q8N228 414 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 CCDC26Q8TAB7 109 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 ENOX1Q8TC92 643 aaKnown RBP8.83□□□□□ -1
SSBP3-212ENST00000528930 EPS8L1Q8TE68 723 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 CD101Q93033 1021 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 EXOC4Q96A65 974 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 OTUB2Q96DC9 234 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 TUBGCP2Q9BSJ2 902 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 ACP6Q9NPH0 428 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 ENAMQ9NRM1 1142 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 TBC1D14Q9P2M4 693 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 HESX1Q9UBX0 185 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 APEX2Q9UBZ4 518 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 SH3BP1Q9Y3L3 701 aa8.83□□□□□ -1
SSBP3-212ENST00000528930 A0A0A0MRY4 1105 aa8.82□□□□□ -1
SSBP3-212ENST00000528930 ANTXRLA6NF34 631 aa8.82□□□□□ -1
SSBP3-212ENST00000528930 YJEFN3A6XGL0 299 aa8.82□□□□□ -1
SSBP3-212ENST00000528930 E7ENQ6 273 aa8.82□□□□□ -1
SSBP3-212ENST00000528930 GOLGA6L22H0YM25 854 aa8.82□□□□□ -1
SSBP3-212ENST00000528930 STC2O76061 302 aa8.82□□□□□ -1
SSBP3-212ENST00000528930 IRF1P10914 325 aa8.82□□□□□ -1
SSBP3-212ENST00000528930 RALAP11233 206 aa8.82□□□□□ -1
SSBP3-212ENST00000528930 GRNP28799 593 aaKnown RBP8.82□□□□□ -1
SSBP3-212ENST00000528930 EIF2DP41214 584 aaKnown RBP8.82□□□□□ -1
SSBP3-212ENST00000528930 GPD2P43304 727 aa8.82□□□□□ -1
SSBP3-212ENST00000528930 RPL34P49207 117 aaKnown RBP8.82□□□□□ -1
SSBP3-212ENST00000528930 MFAP3P55082 362 aa8.82□□□□□ -1
SSBP3-212ENST00000528930 CLDN6P56747 220 aa8.82□□□□□ -1
SSBP3-212ENST00000528930 DAOAP59103 153 aa8.82□□□□□ -1
SSBP3-212ENST00000528930 YWHAGP61981 247 aaKnown RBP eCLIP8.82□□□□□ -1
SSBP3-212ENST00000528930 ADIGQ0VDE8 80 aa8.82□□□□□ -1
SSBP3-212ENST00000528930 MESP2Q0VG99 397 aa8.82□□□□□ -1
SSBP3-212ENST00000528930 STILQ15468 1287 aa8.82□□□□□ -1
SSBP3-212ENST00000528930 EXOC3L4Q17RC7 722 aa8.82□□□□□ -1
SSBP3-212ENST00000528930 C10orf120Q5SQS8 335 aa8.82□□□□□ -1
SSBP3-212ENST00000528930 LY6G5CQ5SRR4 150 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms