RNA–Protein interactions for RNA: ENST00000526704.6

LINC01001-201, Transcript of long intergenic non-protein coding RNA 1001, humanhuman

TSL 5 BASIC

Gene LINC01001, Length 2,553 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01001-201ENST00000526704 FERMT1Q9BQL6 677 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 FAM49AQ9H0Q0 323 aaPredicted RBP11.93□□□□□ -0.5
LINC01001-201ENST00000526704 CDH19Q9H159 772 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 GOLGA2P5Q9HBQ8 144 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 GDAP2Q9NXN4 497 aa11.93□□□□□ -0.5
LINC01001-201ENST00000526704 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.92□□□□□ -0.5
LINC01001-201ENST00000526704 EEF2KO00418 725 aaKnown RBP11.92□□□□□ -0.5
LINC01001-201ENST00000526704 RNASEH1O60930 286 aaKnown RBP11.92□□□□□ -0.5
LINC01001-201ENST00000526704 GPR32O75388 356 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 ZMPSTE24O75844 475 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 BEST1O76090 585 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 SNUPNO95149 360 aaKnown RBP11.92□□□□□ -0.5
LINC01001-201ENST00000526704 MMP3P08254 477 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 YY1P25490 414 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 ABCG1P45844 678 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 SOX4Q06945 474 aaPredicted RBP11.92□□□□□ -0.5
LINC01001-201ENST00000526704 CUL3Q13618 768 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 SLC9B1Q4ZJI4 515 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 SYPL2Q5VXT5 272 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 FSTL4Q6MZW2 842 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 EPGNQ6UW88 154 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 DEFB107AQ8IZN7 70 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 SERBP1Q8NC51 408 aaKnown RBP eCLIP11.92□□□□□ -0.5
LINC01001-201ENST00000526704 APPL2Q8NEU8 664 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 PPP2R3CQ969Q6 453 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 OPTNQ96CV9 577 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 CMTM5Q96DZ9 223 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 ZNF560Q96MR9 790 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 AGAP3Q96P47 875 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 OSMRQ99650 979 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 LRRC40Q9H9A6 602 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 COG4Q9H9E3 785 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 PIGVQ9NUD9 493 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 SETD4Q9NVD3 440 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 ZDHHC7Q9NXF8 308 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 KLK14Q9P0G3 267 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 ADAMTS6Q9UKP5 1117 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 ZCWPW2A0A1B0GU75 182 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 FAM72CH0Y354 149 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 M0QYT0 321 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 CLDN5O00501 218 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 DCXO43602 365 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 AP2A1O95782 977 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 ZCCHC18P0CG32 403 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 COX4I1P13073 169 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 NOS2P35228 1153 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 SPRP35270 261 aaPredicted RBP11.92□□□□□ -0.5
LINC01001-201ENST00000526704 NDUFV1P49821 464 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 CDK7P50613 346 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 ASPHQ12797 758 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 MSLNQ13421 630 aaPredicted RBP11.92□□□□□ -0.5
LINC01001-201ENST00000526704 DLG2Q15700 870 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 SFT2D3Q587I9 215 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 FAM72AQ5TYM5 149 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 FAM72DQ6L9T8 149 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 HFE2Q6ZVN8 426 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 PID1Q7Z2X4 250 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 FAM72BQ86X60 149 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 EFCAB3Q8N7B9 438 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 B3GALNT2Q8NCR0 500 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 MAPK15Q8TD08 544 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 SLC26A7Q8TE54 656 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 JADE3Q92613 823 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 SLC2A13Q96QE2 648 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 DUSP16Q9BY84 665 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 CAB39LQ9H9S4 337 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 PAPOLBQ9NRJ5 636 aaKnown RBP11.92□□□□□ -0.5
LINC01001-201ENST00000526704 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.92□□□□□ -0.5
LINC01001-201ENST00000526704 KLHL8Q9P2G9 620 aaPredicted RBP11.92□□□□□ -0.5
LINC01001-201ENST00000526704 VANGL2Q9ULK5 521 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 POMPQ9Y244 141 aa11.92□□□□□ -0.5
LINC01001-201ENST00000526704 SMIM28A0A1B0GU29 152 aa11.91□□□□□ -0.5
LINC01001-201ENST00000526704 E9PBE3 544 aa11.91□□□□□ -0.5
LINC01001-201ENST00000526704 KLHL41O60662 606 aa11.91□□□□□ -0.5
LINC01001-201ENST00000526704 HSPA4LO95757 839 aa11.91□□□□□ -0.5
LINC01001-201ENST00000526704 AMHP03971 560 aa11.91□□□□□ -0.5
LINC01001-201ENST00000526704 HOXD8P13378 290 aaPredicted RBP11.91□□□□□ -0.5
LINC01001-201ENST00000526704 PRDX6P30041 224 aa11.91□□□□□ -0.5
LINC01001-201ENST00000526704 PAPOLAP51003 745 aaKnown RBP11.91□□□□□ -0.5
LINC01001-201ENST00000526704 NME3Q13232 169 aa11.91□□□□□ -0.5
LINC01001-201ENST00000526704 FRG1Q14331 258 aaKnown RBP11.91□□□□□ -0.5
LINC01001-201ENST00000526704 TCHHL1Q5QJ38 904 aaPredicted RBP11.91□□□□□ -0.5
LINC01001-201ENST00000526704 LPCAT4Q643R3 524 aa11.91□□□□□ -0.5
LINC01001-201ENST00000526704 TMEM135Q86UB9 458 aa11.91□□□□□ -0.5
LINC01001-201ENST00000526704 HPS6Q86YV9 775 aa11.91□□□□□ -0.5
LINC01001-201ENST00000526704 PPP1R13LQ8WUF5 828 aa11.91□□□□□ -0.5
LINC01001-201ENST00000526704 HNRNPABQ99729 332 aaKnown RBP11.91□□□□□ -0.5
LINC01001-201ENST00000526704 CASS4Q9NQ75 786 aa11.91□□□□□ -0.5
LINC01001-201ENST00000526704 ANLNQ9NQW6 1124 aa11.91□□□□□ -0.5
LINC01001-201ENST00000526704 MAN1C1Q9NR34 630 aa11.91□□□□□ -0.5
LINC01001-201ENST00000526704 CDY2AQ9Y6F7 541 aa11.91□□□□□ -0.5
LINC01001-201ENST00000526704 CDY1Q9Y6F8 540 aa11.91□□□□□ -0.5
LINC01001-201ENST00000526704 BPTFQ12830 3046 aa11.91□□□□□ -0.5
LINC01001-201ENST00000526704 A0A096LPK6 155 aa11.91□□□□□ -0.5
LINC01001-201ENST00000526704 LOC100653049A0A140TA62 436 aa11.91□□□□□ -0.5
LINC01001-201ENST00000526704 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.91□□□□□ -0.5
LINC01001-201ENST00000526704 TMEM114B3SHH9 223 aa11.91□□□□□ -0.5
LINC01001-201ENST00000526704 I6L893 689 aaPredicted RBP11.91□□□□□ -0.5
LINC01001-201ENST00000526704 KRT34O76011 436 aa11.91□□□□□ -0.5
LINC01001-201ENST00000526704 DDNO94850 711 aaPredicted RBP11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms