RNA–Protein interactions for RNA: ENST00000526627.1

SMIM3-201, Transcript of small integral membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM3, Length 2,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3-201ENST00000526627 SCUBE1Q8IWY4 988 aa20.86■□□□□ 0.93
SMIM3-201ENST00000526627 DTX3LQ8TDB6 740 aa20.86■□□□□ 0.93
SMIM3-201ENST00000526627 AGAP2Q99490 1192 aa20.86■□□□□ 0.93
SMIM3-201ENST00000526627 SYT15Q9BQS2 421 aa20.86■□□□□ 0.93
SMIM3-201ENST00000526627 TSPYL2Q9H2G4 693 aaPredicted RBP20.86■□□□□ 0.93
SMIM3-201ENST00000526627 STN1Q9H668 368 aaKnown RBP20.86■□□□□ 0.93
SMIM3-201ENST00000526627 HHLA1C9JL84 531 aa20.85■□□□□ 0.93
SMIM3-201ENST00000526627 F8W8V4 182 aa20.85■□□□□ 0.93
SMIM3-201ENST00000526627 AP1G2O75843 785 aa20.85■□□□□ 0.93
SMIM3-201ENST00000526627 C6orf222P0C671 652 aaPredicted RBP20.85■□□□□ 0.93
SMIM3-201ENST00000526627 USP17L7P0C7H9 530 aa20.85■□□□□ 0.93
SMIM3-201ENST00000526627 ALOX15P16050 662 aaPredicted RBP20.85■□□□□ 0.93
SMIM3-201ENST00000526627 HOXC8P31273 242 aa20.85■□□□□ 0.93
SMIM3-201ENST00000526627 FRG1Q14331 258 aaKnown RBP20.85■□□□□ 0.93
SMIM3-201ENST00000526627 ULK2Q8IYT8 1036 aa20.85■□□□□ 0.93
SMIM3-201ENST00000526627 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.85■□□□□ 0.93
SMIM3-201ENST00000526627 C1orf21Q9H246 121 aa20.85■□□□□ 0.93
SMIM3-201ENST00000526627 CNGB3Q9NQW8 809 aa20.85■□□□□ 0.93
SMIM3-201ENST00000526627 TXNDC16Q9P2K2 825 aa20.85■□□□□ 0.93
SMIM3-201ENST00000526627 ADAM28Q9UKQ2 775 aa20.85■□□□□ 0.93
SMIM3-201ENST00000526627 USP1O94782 785 aa20.84■□□□□ 0.93
SMIM3-201ENST00000526627 GRK2P25098 689 aa20.84■□□□□ 0.93
SMIM3-201ENST00000526627 HARS2P49590 506 aaKnown RBP20.84■□□□□ 0.93
SMIM3-201ENST00000526627 IDH3AP50213 366 aa20.84■□□□□ 0.93
SMIM3-201ENST00000526627 LIMK2P53671 638 aa20.84■□□□□ 0.93
SMIM3-201ENST00000526627 DNAL1Q4LDG9 190 aa20.84■□□□□ 0.93
SMIM3-201ENST00000526627 ANKRD20A4Q4UJ75 823 aa20.84■□□□□ 0.93
SMIM3-201ENST00000526627 LRRC74BQ6ZQY2 392 aa20.84■□□□□ 0.93
SMIM3-201ENST00000526627 PDZD4Q76G19 769 aaPredicted RBP20.84■□□□□ 0.93
SMIM3-201ENST00000526627 NET1Q7Z628 596 aaPredicted RBP20.84■□□□□ 0.93
SMIM3-201ENST00000526627 PANX3Q96QZ0 392 aa20.84■□□□□ 0.93
SMIM3-201ENST00000526627 THTPAQ9BU02 230 aa20.84■□□□□ 0.93
SMIM3-201ENST00000526627 GBA3Q9H227 469 aa20.84■□□□□ 0.93
SMIM3-201ENST00000526627 SLC7A8Q9UHI5 535 aa20.84■□□□□ 0.93
SMIM3-201ENST00000526627 TIMM13Q9Y5L4 95 aaPredicted RBP20.84■□□□□ 0.93
SMIM3-201ENST00000526627 WASF2Q9Y6W5 498 aa20.84■□□□□ 0.93
SMIM3-201ENST00000526627 C17orf102A2RUQ5 167 aa20.84■□□□□ 0.93
SMIM3-201ENST00000526627 NCAM1P13591 858 aa20.84■□□□□ 0.93
SMIM3-201ENST00000526627 GARSP41250 739 aaKnown RBP20.84■□□□□ 0.93
SMIM3-201ENST00000526627 GALNT2Q10471 571 aa20.84■□□□□ 0.93
SMIM3-201ENST00000526627 IRF5Q13568 498 aa20.84■□□□□ 0.93
SMIM3-201ENST00000526627 TSNAXIP1Q2TAA8 658 aa20.84■□□□□ 0.93
SMIM3-201ENST00000526627 CERCAMQ5T4B2 595 aa20.84■□□□□ 0.93
SMIM3-201ENST00000526627 FSTL4Q6MZW2 842 aa20.84■□□□□ 0.93
SMIM3-201ENST00000526627 STRA8Q7Z7C7 330 aa20.84■□□□□ 0.93
SMIM3-201ENST00000526627 C3orf58Q8NDZ4 430 aa20.84■□□□□ 0.93
SMIM3-201ENST00000526627 DPF3Q92784 378 aa20.84■□□□□ 0.93
SMIM3-201ENST00000526627 HDAC11Q96DB2 347 aa20.84■□□□□ 0.93
SMIM3-201ENST00000526627 SPON1Q9HCB6 807 aa20.84■□□□□ 0.93
SMIM3-201ENST00000526627 DDIT4Q9NX09 232 aa20.84■□□□□ 0.93
SMIM3-201ENST00000526627 MIOSQ9NXC5 875 aa20.84■□□□□ 0.93
SMIM3-201ENST00000526627 BFARQ9NZS9 450 aa20.84■□□□□ 0.93
SMIM3-201ENST00000526627 A6NHS1 94 aa20.83■□□□□ 0.93
SMIM3-201ENST00000526627 RALBP11234 206 aa20.83■□□□□ 0.93
SMIM3-201ENST00000526627 ABCE1P61221 599 aaKnown RBP20.83■□□□□ 0.93
SMIM3-201ENST00000526627 MAP2K5Q13163 448 aa20.83■□□□□ 0.93
SMIM3-201ENST00000526627 ITGA9Q13797 1035 aa20.83■□□□□ 0.93
SMIM3-201ENST00000526627 MUM1Q2TAK8 710 aa20.83■□□□□ 0.93
SMIM3-201ENST00000526627 RIPOR1Q6ZS17 1223 aa20.83■□□□□ 0.93
SMIM3-201ENST00000526627 ZSCAN18Q8TBC5 510 aaPredicted RBP20.83■□□□□ 0.93
SMIM3-201ENST00000526627 STMN2Q93045 179 aa20.83■□□□□ 0.93
SMIM3-201ENST00000526627 MFSD3Q96ES6 412 aa20.83■□□□□ 0.93
SMIM3-201ENST00000526627 ATXN7L3BQ96GX2 97 aa20.83■□□□□ 0.93
SMIM3-201ENST00000526627 MCMBPQ9BTE3 642 aa20.83■□□□□ 0.93
SMIM3-201ENST00000526627 DNAJC28Q9NX36 388 aa20.83■□□□□ 0.93
SMIM3-201ENST00000526627 EIF4E1BA6NMX2 242 aaKnown RBP20.83■□□□□ 0.92
SMIM3-201ENST00000526627 NCAM2O15394 837 aa20.83■□□□□ 0.92
SMIM3-201ENST00000526627 LTFP02788 710 aa20.83■□□□□ 0.92
SMIM3-201ENST00000526627 CPA3P15088 417 aa20.83■□□□□ 0.92
SMIM3-201ENST00000526627 CCL14Q16627 93 aa20.83■□□□□ 0.92
SMIM3-201ENST00000526627 INTS6LQ5JSJ4 861 aaKnown RBP20.83■□□□□ 0.92
SMIM3-201ENST00000526627 CLEC14AQ86T13 490 aa20.83■□□□□ 0.92
SMIM3-201ENST00000526627 SHKBP1Q8TBC3 707 aa20.83■□□□□ 0.92
SMIM3-201ENST00000526627 FAM136AQ96C01 138 aa20.83■□□□□ 0.92
SMIM3-201ENST00000526627 COLEC11Q9BWP8 271 aa20.83■□□□□ 0.92
SMIM3-201ENST00000526627 NUP205Q92621 2012 aa20.83■□□□□ 0.92
SMIM3-201ENST00000526627 GLTPD2A6NH11 291 aa20.82■□□□□ 0.92
SMIM3-201ENST00000526627 MEI4A8MW99 385 aa20.82■□□□□ 0.92
SMIM3-201ENST00000526627 SIN3BO75182 1162 aa20.82■□□□□ 0.92
SMIM3-201ENST00000526627 ZNF189O75820 626 aaPredicted RBP20.82■□□□□ 0.92
SMIM3-201ENST00000526627 NFKB1P19838 968 aa20.82■□□□□ 0.92
SMIM3-201ENST00000526627 SPRP35270 261 aaPredicted RBP20.82■□□□□ 0.92
SMIM3-201ENST00000526627 SERPINB8P50452 374 aa20.82■□□□□ 0.92
SMIM3-201ENST00000526627 CLCNKBP51801 687 aa20.82■□□□□ 0.92
SMIM3-201ENST00000526627 CCDC153Q494R4 210 aa20.82■□□□□ 0.92
SMIM3-201ENST00000526627 SPRYD7Q5W111 196 aa20.82■□□□□ 0.92
SMIM3-201ENST00000526627 TNS4Q8IZW8 715 aa20.82■□□□□ 0.92
SMIM3-201ENST00000526627 SCG3Q8WXD2 468 aaKnown RBP20.82■□□□□ 0.92
SMIM3-201ENST00000526627 OSBPL1AQ9BXW6 950 aa20.82■□□□□ 0.92
SMIM3-201ENST00000526627 OXCT2Q9BYC2 517 aaPredicted RBP20.82■□□□□ 0.92
SMIM3-201ENST00000526627 RHOBTB2Q9BYZ6 727 aa20.82■□□□□ 0.92
SMIM3-201ENST00000526627 DONSONQ9NYP3 566 aa20.82■□□□□ 0.92
SMIM3-201ENST00000526627 CPA4Q9UI42 421 aa20.82■□□□□ 0.92
SMIM3-201ENST00000526627 APOBEC2Q9Y235 224 aaKnown RBP20.82■□□□□ 0.92
SMIM3-201ENST00000526627 A0A088AWK7 358 aa20.82■□□□□ 0.92
SMIM3-201ENST00000526627 MX2P20592 715 aa20.82■□□□□ 0.92
SMIM3-201ENST00000526627 ABCG1P45844 678 aa20.82■□□□□ 0.92
SMIM3-201ENST00000526627 LHX1P48742 406 aa20.82■□□□□ 0.92
SMIM3-201ENST00000526627 CPT1AP50416 773 aa20.82■□□□□ 0.92
SMIM3-201ENST00000526627 ACTR3P61158 418 aa20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms