RNA–Protein interactions for RNA: ENST00000526510.5

PPP1CA-204, Transcript of protein phosphatase 1 catalytic subunit alpha, humanhuman

TSL 1 (best)

Gene PPP1CA, Length 1,677 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1CA-204ENST00000526510 CFAP58Q5T655 872 aa20.37■□□□□ 0.85
PPP1CA-204ENST00000526510 ALS2CLQ60I27 953 aa20.37■□□□□ 0.85
PPP1CA-204ENST00000526510 CCDC13Q8IYE1 715 aa20.37■□□□□ 0.85
PPP1CA-204ENST00000526510 CFAP52Q8N1V2 620 aa20.37■□□□□ 0.85
PPP1CA-204ENST00000526510 TCEAL4Q96EI5 215 aa20.37■□□□□ 0.85
PPP1CA-204ENST00000526510 PRICKLE1Q96MT3 831 aaPredicted RBP20.37■□□□□ 0.85
PPP1CA-204ENST00000526510 TSGA13Q96PP4 275 aa20.37■□□□□ 0.85
PPP1CA-204ENST00000526510 FOXP3Q9BZS1 431 aa20.37■□□□□ 0.85
PPP1CA-204ENST00000526510 PABPC3Q9H361 631 aaKnown RBP20.37■□□□□ 0.85
PPP1CA-204ENST00000526510 NFS1Q9Y697 457 aa20.37■□□□□ 0.85
PPP1CA-204ENST00000526510 GOLGA6BA6NDN3 693 aa20.36■□□□□ 0.85
PPP1CA-204ENST00000526510 F5H5T6 163 aa20.36■□□□□ 0.85
PPP1CA-204ENST00000526510 TRDMT1O14717 391 aaKnown RBP20.36■□□□□ 0.85
PPP1CA-204ENST00000526510 NDC80O14777 642 aa20.36■□□□□ 0.85
PPP1CA-204ENST00000526510 CHADO15335 359 aa20.36■□□□□ 0.85
PPP1CA-204ENST00000526510 MAFKO60675 156 aa20.36■□□□□ 0.85
PPP1CA-204ENST00000526510 HOXA9P31269 272 aa20.36■□□□□ 0.85
PPP1CA-204ENST00000526510 MAGEA6P43360 314 aa20.36■□□□□ 0.85
PPP1CA-204ENST00000526510 SGSHP51688 502 aa20.36■□□□□ 0.85
PPP1CA-204ENST00000526510 ZBTB17Q13105 803 aa20.36■□□□□ 0.85
PPP1CA-204ENST00000526510 SPDYCQ5MJ68 293 aa20.36■□□□□ 0.85
PPP1CA-204ENST00000526510 ARHGEF18Q6ZSZ5 1173 aa20.36■□□□□ 0.85
PPP1CA-204ENST00000526510 SHKBP1Q8TBC3 707 aa20.36■□□□□ 0.85
PPP1CA-204ENST00000526510 GDPD5Q8WTR4 605 aa20.36■□□□□ 0.85
PPP1CA-204ENST00000526510 ARNTL2Q8WYA1 636 aa20.36■□□□□ 0.85
PPP1CA-204ENST00000526510 RBM15Q96T37 977 aaKnown RBP eCLIP20.36■□□□□ 0.85
PPP1CA-204ENST00000526510 TSPYL1Q9H0U9 437 aa20.36■□□□□ 0.85
PPP1CA-204ENST00000526510 CDC42EP4Q9H3Q1 356 aaKnown RBP20.36■□□□□ 0.85
PPP1CA-204ENST00000526510 PLAAQ9Y263 795 aa20.36■□□□□ 0.85
PPP1CA-204ENST00000526510 HCFC2Q9Y5Z7 792 aa20.36■□□□□ 0.85
PPP1CA-204ENST00000526510 MYO9BQ13459 2157 aa20.36■□□□□ 0.85
PPP1CA-204ENST00000526510 OPHN1O60890 802 aa20.35■□□□□ 0.85
PPP1CA-204ENST00000526510 PTPN2P17706 415 aa20.35■□□□□ 0.85
PPP1CA-204ENST00000526510 CCNCP24863 283 aa20.35■□□□□ 0.85
PPP1CA-204ENST00000526510 PAPOLAP51003 745 aaKnown RBP20.35■□□□□ 0.85
PPP1CA-204ENST00000526510 NDST2P52849 883 aa20.35■□□□□ 0.85
PPP1CA-204ENST00000526510 FAM193AP78312 1265 aa20.35■□□□□ 0.85
PPP1CA-204ENST00000526510 SLC7A9P82251 487 aa20.35■□□□□ 0.85
PPP1CA-204ENST00000526510 ZNF33AQ06730 810 aa20.35■□□□□ 0.85
PPP1CA-204ENST00000526510 FNBP1LQ5T0N5 605 aa20.35■□□□□ 0.85
PPP1CA-204ENST00000526510 ADGRF1Q5T601 910 aa20.35■□□□□ 0.85
PPP1CA-204ENST00000526510 ZNF697Q5TEC3 545 aa20.35■□□□□ 0.85
PPP1CA-204ENST00000526510 PPP2R2DQ66LE6 453 aa20.35■□□□□ 0.85
PPP1CA-204ENST00000526510 OR2W6PQ8NHA6 318 aa20.35■□□□□ 0.85
PPP1CA-204ENST00000526510 SLC46A2Q9BY10 475 aa20.35■□□□□ 0.85
PPP1CA-204ENST00000526510 STOML2Q9UJZ1 356 aa20.35■□□□□ 0.85
PPP1CA-204ENST00000526510 F5H423 210 aaPredicted RBP20.35■□□□□ 0.85
PPP1CA-204ENST00000526510 H3BQF6 201 aa20.35■□□□□ 0.85
PPP1CA-204ENST00000526510 SCAMP3O14828 347 aaKnown RBP20.35■□□□□ 0.85
PPP1CA-204ENST00000526510 STK10O94804 968 aaKnown RBP20.35■□□□□ 0.85
PPP1CA-204ENST00000526510 HNRNPA1P09651 372 aaKnown RBP eCLIP20.35■□□□□ 0.85
PPP1CA-204ENST00000526510 SEMA5AQ13591 1074 aa20.35■□□□□ 0.85
PPP1CA-204ENST00000526510 SLC5A9Q2M3M2 681 aa20.35■□□□□ 0.85
PPP1CA-204ENST00000526510 MSS51Q4VC12 460 aa20.35■□□□□ 0.85
PPP1CA-204ENST00000526510 Q6ZNB5 142 aa20.35■□□□□ 0.85
PPP1CA-204ENST00000526510 RELL1Q8IUW5 271 aa20.35■□□□□ 0.85
PPP1CA-204ENST00000526510 ATPAF2Q8N5M1 289 aa20.35■□□□□ 0.85
PPP1CA-204ENST00000526510 MSRAQ9UJ68 235 aa20.35■□□□□ 0.85
PPP1CA-204ENST00000526510 ZFP37Q9Y6Q3 630 aaPredicted RBP20.35■□□□□ 0.85
PPP1CA-204ENST00000526510 REV3LO60673 3130 aa20.34■□□□□ 0.85
PPP1CA-204ENST00000526510 SMAPO00193 183 aa20.34■□□□□ 0.85
PPP1CA-204ENST00000526510 RIPK2O43353 540 aa20.34■□□□□ 0.85
PPP1CA-204ENST00000526510 BANF1O75531 89 aa20.34■□□□□ 0.85
PPP1CA-204ENST00000526510 SYF2O95926 243 aaKnown RBP20.34■□□□□ 0.85
PPP1CA-204ENST00000526510 CKMP06732 381 aa20.34■□□□□ 0.85
PPP1CA-204ENST00000526510 RHOP08100 348 aa20.34■□□□□ 0.85
PPP1CA-204ENST00000526510 RPS24P62847 133 aaKnown RBP20.34■□□□□ 0.85
PPP1CA-204ENST00000526510 NTHL1P78549 312 aa20.34■□□□□ 0.85
PPP1CA-204ENST00000526510 FASTKD3Q14CZ7 662 aaKnown RBP20.34■□□□□ 0.85
PPP1CA-204ENST00000526510 RAB30Q15771 203 aa20.34■□□□□ 0.85
PPP1CA-204ENST00000526510 TRMT10CQ7L0Y3 403 aaKnown RBP20.34■□□□□ 0.85
PPP1CA-204ENST00000526510 ZNF707Q96C28 371 aaPredicted RBP20.34■□□□□ 0.85
PPP1CA-204ENST00000526510 HMCESQ96FZ2 354 aa20.34■□□□□ 0.85
PPP1CA-204ENST00000526510 ZNF419Q96HQ0 510 aaPredicted RBP20.34■□□□□ 0.85
PPP1CA-204ENST00000526510 GCNAQ96QF7 691 aa20.34■□□□□ 0.85
PPP1CA-204ENST00000526510 FERMT1Q9BQL6 677 aa20.34■□□□□ 0.85
PPP1CA-204ENST00000526510 GORASP1Q9BQQ3 440 aa20.34■□□□□ 0.85
PPP1CA-204ENST00000526510 LRRC4CQ9HCJ2 640 aa20.34■□□□□ 0.85
PPP1CA-204ENST00000526510 SAYSD1Q9NPB0 183 aa20.34■□□□□ 0.85
PPP1CA-204ENST00000526510 NINJ2Q9NZG7 142 aa20.34■□□□□ 0.85
PPP1CA-204ENST00000526510 TRAV19A0A0A6YYK7 116 aa20.33■□□□□ 0.85
PPP1CA-204ENST00000526510 SPDYE4A6NLX3 237 aa20.33■□□□□ 0.85
PPP1CA-204ENST00000526510 RASA4BC9J798 803 aa20.33■□□□□ 0.85
PPP1CA-204ENST00000526510 ZBTB24O43167 697 aaPredicted RBP20.33■□□□□ 0.85
PPP1CA-204ENST00000526510 MTSS1O43312 755 aa20.33■□□□□ 0.85
PPP1CA-204ENST00000526510 RASA4O43374 803 aa20.33■□□□□ 0.85
PPP1CA-204ENST00000526510 ZNF189O75820 626 aaPredicted RBP20.33■□□□□ 0.85
PPP1CA-204ENST00000526510 PSMB4P28070 264 aa20.33■□□□□ 0.85
PPP1CA-204ENST00000526510 CD68P34810 354 aaPredicted RBP20.33■□□□□ 0.85
PPP1CA-204ENST00000526510 SLC29A2Q14542 456 aa20.33■□□□□ 0.85
PPP1CA-204ENST00000526510 KYNUQ16719 465 aa20.33■□□□□ 0.85
PPP1CA-204ENST00000526510 TEX44Q53QW1 395 aa20.33■□□□□ 0.85
PPP1CA-204ENST00000526510 PID1Q7Z2X4 250 aa20.33■□□□□ 0.85
PPP1CA-204ENST00000526510 WDR83Q9BRX9 315 aaKnown RBP20.33■□□□□ 0.85
PPP1CA-204ENST00000526510 ACBD3Q9H3P7 528 aa20.33■□□□□ 0.85
PPP1CA-204ENST00000526510 IGSF9Q9P2J2 1179 aa20.33■□□□□ 0.85
PPP1CA-204ENST00000526510 MYOFQ9NZM1 2061 aa20.33■□□□□ 0.84
PPP1CA-204ENST00000526510 NUP210Q8TEM1 1887 aaPredicted RBP20.33■□□□□ 0.84
PPP1CA-204ENST00000526510 E7ESA3 106 aa20.32■□□□□ 0.84
PPP1CA-204ENST00000526510 TSPAN3O60637 253 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms