RNA–Protein interactions for RNA: ENST00000526117.5

LMX1B-203, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 1,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-203ENST00000526117 SCYL2Q6P3W7 929 aa17.75■□□□□ 0.43
LMX1B-203ENST00000526117 FAM72BQ86X60 149 aa17.75■□□□□ 0.43
LMX1B-203ENST00000526117 RHOT2Q8IXI1 618 aa17.75■□□□□ 0.43
LMX1B-203ENST00000526117 TSTD1Q8NFU3 115 aa17.75■□□□□ 0.43
LMX1B-203ENST00000526117 ZNF564Q8TBZ8 553 aaPredicted RBP17.75■□□□□ 0.43
LMX1B-203ENST00000526117 MYO19Q96H55 970 aa17.75■□□□□ 0.43
LMX1B-203ENST00000526117 EPAS1Q99814 870 aa17.75■□□□□ 0.43
LMX1B-203ENST00000526117 FEM1AQ9BSK4 669 aa17.75■□□□□ 0.43
LMX1B-203ENST00000526117 PACSIN1Q9BY11 444 aa17.75■□□□□ 0.43
LMX1B-203ENST00000526117 FBRSQ9HAH7 460 aa17.75■□□□□ 0.43
LMX1B-203ENST00000526117 CACNA2D2Q9NY47 1150 aa17.75■□□□□ 0.43
LMX1B-203ENST00000526117 USP18Q9UMW8 372 aa17.75■□□□□ 0.43
LMX1B-203ENST00000526117 SNX10Q9Y5X0 201 aa17.75■□□□□ 0.43
LMX1B-203ENST00000526117 PRPSAP2O60256 369 aa17.74■□□□□ 0.43
LMX1B-203ENST00000526117 SRGAP2O75044 1071 aa17.74■□□□□ 0.43
LMX1B-203ENST00000526117 MAN1A1P33908 653 aa17.74■□□□□ 0.43
LMX1B-203ENST00000526117 CYLC1P35663 651 aaPredicted RBP17.74■□□□□ 0.43
LMX1B-203ENST00000526117 ECT2LQ008S8 904 aa17.74■□□□□ 0.43
LMX1B-203ENST00000526117 BOLA3Q53S33 107 aa17.74■□□□□ 0.43
LMX1B-203ENST00000526117 OR52K2Q8NGK3 314 aa17.74■□□□□ 0.43
LMX1B-203ENST00000526117 TEKT4Q8WW24 435 aa17.74■□□□□ 0.43
LMX1B-203ENST00000526117 ATRIPQ8WXE1 791 aa17.74■□□□□ 0.43
LMX1B-203ENST00000526117 MRGPRX3Q96LB0 322 aa17.74■□□□□ 0.43
LMX1B-203ENST00000526117 HHIPQ96QV1 700 aa17.74■□□□□ 0.43
LMX1B-203ENST00000526117 PEBP4Q96S96 227 aa17.74■□□□□ 0.43
LMX1B-203ENST00000526117 DONSONQ9NYP3 566 aa17.74■□□□□ 0.43
LMX1B-203ENST00000526117 MPP6Q9NZW5 540 aa17.74■□□□□ 0.43
LMX1B-203ENST00000526117 CTTNBP2NLQ9P2B4 639 aa17.74■□□□□ 0.43
LMX1B-203ENST00000526117 AP4E1Q9UPM8 1137 aa17.74■□□□□ 0.43
LMX1B-203ENST00000526117 CKAP5Q14008 2032 aa17.74■□□□□ 0.43
LMX1B-203ENST00000526117 FGF10O15520 208 aaPredicted RBP17.73■□□□□ 0.43
LMX1B-203ENST00000526117 RHOCP08134 193 aa17.73■□□□□ 0.43
LMX1B-203ENST00000526117 MZF1P28698 734 aaPredicted RBP17.73■□□□□ 0.43
LMX1B-203ENST00000526117 OR1E1P30953 314 aa17.73■□□□□ 0.43
LMX1B-203ENST00000526117 ETFBP38117 255 aa17.73■□□□□ 0.43
LMX1B-203ENST00000526117 ARHGAP25P42331 645 aa17.73■□□□□ 0.43
LMX1B-203ENST00000526117 HCAR3P49019 387 aa17.73■□□□□ 0.43
LMX1B-203ENST00000526117 HADHBP55084 474 aaKnown RBP17.73■□□□□ 0.43
LMX1B-203ENST00000526117 CAMK2GQ13555 558 aaPredicted RBP17.73■□□□□ 0.43
LMX1B-203ENST00000526117 STARD3Q14849 445 aa17.73■□□□□ 0.43
LMX1B-203ENST00000526117 DPYSL2Q16555 572 aa17.73■□□□□ 0.43
LMX1B-203ENST00000526117 SERPINA13PQ6UXR4 307 aa17.73■□□□□ 0.43
LMX1B-203ENST00000526117 METTL3Q86U44 580 aaKnown RBP17.73■□□□□ 0.43
LMX1B-203ENST00000526117 APCDD1Q8J025 514 aa17.73■□□□□ 0.43
LMX1B-203ENST00000526117 DCAF4L2Q8NA75 395 aa17.73■□□□□ 0.43
LMX1B-203ENST00000526117 SORCS1Q8WY21 1168 aa17.73■□□□□ 0.43
LMX1B-203ENST00000526117 RFFLQ8WZ73 363 aa17.73■□□□□ 0.43
LMX1B-203ENST00000526117 SNRNP25Q9BV90 132 aaKnown RBP17.73■□□□□ 0.43
LMX1B-203ENST00000526117 C2orf49Q9BVC5 232 aaPredicted RBP17.73■□□□□ 0.43
LMX1B-203ENST00000526117 EPC1Q9H2F5 836 aa17.73■□□□□ 0.43
LMX1B-203ENST00000526117 LUC7LQ9NQ29 371 aaKnown RBP17.73■□□□□ 0.43
LMX1B-203ENST00000526117 ERVW-1Q9UQF0 538 aa17.73■□□□□ 0.43
LMX1B-203ENST00000526117 GOLGA6L6A8MZA4 724 aa17.72■□□□□ 0.43
LMX1B-203ENST00000526117 AXIN1O15169 862 aa17.72■□□□□ 0.43
LMX1B-203ENST00000526117 PROSCO94903 275 aa17.72■□□□□ 0.43
LMX1B-203ENST00000526117 PRKCHP24723 683 aa17.72■□□□□ 0.43
LMX1B-203ENST00000526117 FNTBP49356 437 aa17.72■□□□□ 0.43
LMX1B-203ENST00000526117 ST8SIA6P61647 398 aa17.72■□□□□ 0.43
LMX1B-203ENST00000526117 SLC25A11Q02978 314 aaKnown RBP17.72■□□□□ 0.43
LMX1B-203ENST00000526117 DMWDQ09019 674 aa17.72■□□□□ 0.43
LMX1B-203ENST00000526117 PYROXD2Q8N2H3 581 aa17.72■□□□□ 0.43
LMX1B-203ENST00000526117 RTL3Q8N8U3 475 aaKnown RBP17.72■□□□□ 0.43
LMX1B-203ENST00000526117 MDGA1Q8NFP4 955 aa17.72■□□□□ 0.43
LMX1B-203ENST00000526117 SLC35G2Q8TBE7 412 aa17.72■□□□□ 0.43
LMX1B-203ENST00000526117 CATSPERBQ9H7T0 1116 aa17.72■□□□□ 0.43
LMX1B-203ENST00000526117 ZDHHC4Q9NPG8 344 aa17.72■□□□□ 0.43
LMX1B-203ENST00000526117 POLR3BQ9NW08 1133 aaPredicted RBP17.72■□□□□ 0.43
LMX1B-203ENST00000526117 SUN2Q9UH99 717 aa17.72■□□□□ 0.43
LMX1B-203ENST00000526117 HS3ST2Q9Y278 367 aa17.72■□□□□ 0.43
LMX1B-203ENST00000526117 CHD5Q8TDI0 1954 aa17.71■□□□□ 0.43
LMX1B-203ENST00000526117 PLXND1Q9Y4D7 1925 aa17.71■□□□□ 0.43
LMX1B-203ENST00000526117 A0A0A6YYK5 440 aaPredicted RBP17.71■□□□□ 0.43
LMX1B-203ENST00000526117 TCRBV21S2A2A0A5A6 115 aa17.71■□□□□ 0.43
LMX1B-203ENST00000526117 TARSL2A2RTX5 802 aaKnown RBP17.71■□□□□ 0.43
LMX1B-203ENST00000526117 WASH3PC4AMC7 463 aa17.71■□□□□ 0.43
LMX1B-203ENST00000526117 NDUFA10O95299 355 aa17.71■□□□□ 0.43
LMX1B-203ENST00000526117 HOXD11P31277 338 aaPredicted RBP17.71■□□□□ 0.43
LMX1B-203ENST00000526117 GSDMDP57764 484 aa17.71■□□□□ 0.43
LMX1B-203ENST00000526117 KRT83P78385 493 aa17.71■□□□□ 0.43
LMX1B-203ENST00000526117 SPA17Q15506 151 aa17.71■□□□□ 0.43
LMX1B-203ENST00000526117 HNRNPA1L2Q32P51 320 aaKnown RBP17.71■□□□□ 0.43
LMX1B-203ENST00000526117 FNDC3BQ53EP0 1204 aaKnown RBP17.71■□□□□ 0.43
LMX1B-203ENST00000526117 RNF219Q5W0B1 726 aaPredicted RBP17.71■□□□□ 0.43
LMX1B-203ENST00000526117 KIAA1211LQ6NV74 962 aa17.71■□□□□ 0.43
LMX1B-203ENST00000526117 TFAP2DQ7Z6R9 452 aa17.71■□□□□ 0.43
LMX1B-203ENST00000526117 C11orf74Q86VG3 221 aa17.71■□□□□ 0.43
LMX1B-203ENST00000526117 TMEM139Q8IV31 216 aa17.71■□□□□ 0.43
LMX1B-203ENST00000526117 FAM71BQ8TC56 605 aa17.71■□□□□ 0.43
LMX1B-203ENST00000526117 CYB5D2Q8WUJ1 264 aa17.71■□□□□ 0.43
LMX1B-203ENST00000526117 GAB3Q8WWW8 586 aa17.71■□□□□ 0.43
LMX1B-203ENST00000526117 CALR3Q96L12 384 aaKnown RBP17.71■□□□□ 0.43
LMX1B-203ENST00000526117 PSMB7Q99436 277 aa17.71■□□□□ 0.43
LMX1B-203ENST00000526117 MAGEB5Q9BZ81 275 aa17.71■□□□□ 0.43
LMX1B-203ENST00000526117 MUC3BQ9H195 1237 aa17.71■□□□□ 0.43
LMX1B-203ENST00000526117 MAGEH1Q9H213 219 aa17.71■□□□□ 0.43
LMX1B-203ENST00000526117 VPS28Q9UK41 221 aa17.71■□□□□ 0.43
LMX1B-203ENST00000526117 EPN1Q9Y6I3 576 aaPredicted RBP17.71■□□□□ 0.43
LMX1B-203ENST00000526117 MYO15AQ9UKN7 3530 aa17.71■□□□□ 0.43
LMX1B-203ENST00000526117 ATG2BQ96BY7 2078 aa17.71■□□□□ 0.43
LMX1B-203ENST00000526117 MYO18AQ92614 2054 aaKnown RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms