RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 HSPA1BP0DMV9 641 aaKnown RBP4.96□□□□□ -1.62
CSDE1-211ENST00000525970 PEPDP12955 493 aa4.96□□□□□ -1.62
CSDE1-211ENST00000525970 PORP16435 677 aaPredicted RBP4.96□□□□□ -1.62
CSDE1-211ENST00000525970 ADRA1DP25100 572 aa4.96□□□□□ -1.62
CSDE1-211ENST00000525970 GKP32189 559 aa4.96□□□□□ -1.62
CSDE1-211ENST00000525970 GRK5P34947 590 aa4.96□□□□□ -1.62
CSDE1-211ENST00000525970 MVDP53602 400 aa4.96□□□□□ -1.62
CSDE1-211ENST00000525970 TAS2R50P59544 299 aa4.96□□□□□ -1.62
CSDE1-211ENST00000525970 BFSP2Q13515 415 aa4.96□□□□□ -1.62
CSDE1-211ENST00000525970 ZNF362Q5T0B9 420 aaPredicted RBP4.96□□□□□ -1.62
CSDE1-211ENST00000525970 AKNAD1Q5T1N1 836 aa4.96□□□□□ -1.62
CSDE1-211ENST00000525970 ARMC3Q5W041 872 aa4.96□□□□□ -1.62
CSDE1-211ENST00000525970 TBC1D3GQ6DHY5 549 aa4.96□□□□□ -1.62
CSDE1-211ENST00000525970 TBC1D3CQ6IPX1 549 aa4.96□□□□□ -1.62
CSDE1-211ENST00000525970 ATF7IPQ6VMQ6 1270 aa4.96□□□□□ -1.62
CSDE1-211ENST00000525970 TBC1D3Q8IZP1 549 aaPredicted RBP4.96□□□□□ -1.62
CSDE1-211ENST00000525970 ZNF366Q8N895 744 aa4.96□□□□□ -1.62
CSDE1-211ENST00000525970 RFWD2Q8NHY2 731 aa4.96□□□□□ -1.62
CSDE1-211ENST00000525970 USP6NLQ92738 828 aa4.96□□□□□ -1.62
CSDE1-211ENST00000525970 SH3KBP1Q96B97 665 aa4.96□□□□□ -1.62
CSDE1-211ENST00000525970 PRR11Q96HE9 360 aaPredicted RBP4.96□□□□□ -1.62
CSDE1-211ENST00000525970 PDCL3Q9H2J4 239 aa4.96□□□□□ -1.62
CSDE1-211ENST00000525970 CDCP1Q9H5V8 836 aa4.96□□□□□ -1.62
CSDE1-211ENST00000525970 SAP30LQ9HAJ7 183 aa4.96□□□□□ -1.62
CSDE1-211ENST00000525970 PDE11AQ9HCR9 933 aa4.96□□□□□ -1.62
CSDE1-211ENST00000525970 SEMA4GQ9NTN9 838 aa4.96□□□□□ -1.62
CSDE1-211ENST00000525970 HCN3Q9P1Z3 774 aa4.96□□□□□ -1.62
CSDE1-211ENST00000525970 DKK3Q9UBP4 350 aa4.96□□□□□ -1.62
CSDE1-211ENST00000525970 ST3GAL5Q9UNP4 418 aa4.96□□□□□ -1.62
CSDE1-211ENST00000525970 SH2B3Q9UQQ2 575 aa4.96□□□□□ -1.62
CSDE1-211ENST00000525970 COPG1Q9Y678 874 aaKnown RBP4.96□□□□□ -1.62
CSDE1-211ENST00000525970 POLR2AP24928 1970 aaKnown RBP4.96□□□□□ -1.62
CSDE1-211ENST00000525970 PASKQ96RG2 1323 aa4.96□□□□□ -1.62
CSDE1-211ENST00000525970 WDR27A2RRH5 827 aa4.95□□□□□ -1.62
CSDE1-211ENST00000525970 LINC00473A8K010 186 aa4.95□□□□□ -1.62
CSDE1-211ENST00000525970 GTPBP1O00178 669 aaKnown RBP4.95□□□□□ -1.62
CSDE1-211ENST00000525970 GRM8O00222 908 aa4.95□□□□□ -1.62
CSDE1-211ENST00000525970 MGST3O14880 152 aa4.95□□□□□ -1.62
CSDE1-211ENST00000525970 CA12O43570 354 aa4.95□□□□□ -1.62
CSDE1-211ENST00000525970 PROP1O75360 226 aa4.95□□□□□ -1.62
CSDE1-211ENST00000525970 PGM3O95394 542 aa4.95□□□□□ -1.62
CSDE1-211ENST00000525970 TTLL1O95922 423 aa4.95□□□□□ -1.62
CSDE1-211ENST00000525970 SLC3A2P08195 630 aaKnown RBP4.95□□□□□ -1.62
CSDE1-211ENST00000525970 IL6RP08887 468 aaPredicted RBP4.95□□□□□ -1.62
CSDE1-211ENST00000525970 WEE2P0C1S8 567 aa4.95□□□□□ -1.62
CSDE1-211ENST00000525970 ARSAP15289 507 aa4.95□□□□□ -1.62
CSDE1-211ENST00000525970 ZFXP17010 805 aaPredicted RBP4.95□□□□□ -1.62
CSDE1-211ENST00000525970 ITGB6P18564 788 aa4.95□□□□□ -1.62
CSDE1-211ENST00000525970 AVPR2P30518 371 aa4.95□□□□□ -1.62
CSDE1-211ENST00000525970 ACTN2P35609 894 aa4.95□□□□□ -1.62
CSDE1-211ENST00000525970 KRT20P35900 424 aa4.95□□□□□ -1.62
CSDE1-211ENST00000525970 LIPAP38571 399 aa4.95□□□□□ -1.62
CSDE1-211ENST00000525970 PCP4P48539 62 aa4.95□□□□□ -1.62
CSDE1-211ENST00000525970 CACNA2D1P54289 1103 aa4.95□□□□□ -1.62
CSDE1-211ENST00000525970 RNASELQ05823 741 aaKnown RBP4.95□□□□□ -1.62
CSDE1-211ENST00000525970 MAMLD1Q13495 774 aa4.95□□□□□ -1.62
CSDE1-211ENST00000525970 ALDH1L2Q3SY69 923 aa4.95□□□□□ -1.62
CSDE1-211ENST00000525970 PLAC9Q5JTB6 97 aa4.95□□□□□ -1.62
CSDE1-211ENST00000525970 GRASPQ7Z6J2 395 aaPredicted RBP4.95□□□□□ -1.62
CSDE1-211ENST00000525970 CPLX4Q7Z7G2 160 aa4.95□□□□□ -1.62
CSDE1-211ENST00000525970 ARHGEF25Q86VW2 580 aa4.95□□□□□ -1.62
CSDE1-211ENST00000525970 SRRM1Q8IYB3 904 aaKnown RBP4.95□□□□□ -1.62
CSDE1-211ENST00000525970 OR52L2PQ8NGH6 319 aa4.95□□□□□ -1.62
CSDE1-211ENST00000525970 CUL5Q93034 780 aa4.95□□□□□ -1.62
CSDE1-211ENST00000525970 RNFT2Q96EX2 444 aa4.95□□□□□ -1.62
CSDE1-211ENST00000525970 PBKQ96KB5 322 aa4.95□□□□□ -1.62
CSDE1-211ENST00000525970 PRR25Q96S07 402 aa4.95□□□□□ -1.62
CSDE1-211ENST00000525970 LBHD1Q9BQE6 289 aaPredicted RBP4.95□□□□□ -1.62
CSDE1-211ENST00000525970 IL17RBQ9NRM6 502 aa4.95□□□□□ -1.62
CSDE1-211ENST00000525970 SEPT11Q9NVA2 429 aaKnown RBP4.95□□□□□ -1.62
CSDE1-211ENST00000525970 SLC17A6Q9P2U8 582 aa4.95□□□□□ -1.62
CSDE1-211ENST00000525970 SARDHQ9UL12 918 aa4.95□□□□□ -1.62
CSDE1-211ENST00000525970 C3orf70A6NLC5 250 aaPredicted RBP4.94□□□□□ -1.62
CSDE1-211ENST00000525970 KRTAP29-1A8MX34 341 aaPredicted RBP4.94□□□□□ -1.62
CSDE1-211ENST00000525970 TEX22C9J3V5 150 aa4.94□□□□□ -1.62
CSDE1-211ENST00000525970 TSPAN4O14817 238 aa4.94□□□□□ -1.62
CSDE1-211ENST00000525970 P4HA2O15460 535 aa4.94□□□□□ -1.62
CSDE1-211ENST00000525970 RBMXL2O75526 392 aaKnown RBP4.94□□□□□ -1.62
CSDE1-211ENST00000525970 TJP3O95049 919 aa4.94□□□□□ -1.62
CSDE1-211ENST00000525970 METTL18O95568 372 aa4.94□□□□□ -1.62
CSDE1-211ENST00000525970 LYL1P12980 280 aa4.94□□□□□ -1.62
CSDE1-211ENST00000525970 IL11P20809 199 aa4.94□□□□□ -1.62
CSDE1-211ENST00000525970 PRKCHP24723 683 aa4.94□□□□□ -1.62
CSDE1-211ENST00000525970 COPB2P35606 906 aa4.94□□□□□ -1.62
CSDE1-211ENST00000525970 IGHMBP2P38935 993 aaKnown RBP4.94□□□□□ -1.62
CSDE1-211ENST00000525970 HARS2P49590 506 aaKnown RBP4.94□□□□□ -1.62
CSDE1-211ENST00000525970 CDH15P55291 814 aa4.94□□□□□ -1.62
CSDE1-211ENST00000525970 RPS3AP61247 264 aaKnown RBP4.94□□□□□ -1.62
CSDE1-211ENST00000525970 CREB5Q02930 508 aa4.94□□□□□ -1.62
CSDE1-211ENST00000525970 CDK18Q07002 472 aa4.94□□□□□ -1.62
CSDE1-211ENST00000525970 FOXF2Q12947 444 aa4.94□□□□□ -1.62
CSDE1-211ENST00000525970 TDGQ13569 410 aa4.94□□□□□ -1.62
CSDE1-211ENST00000525970 BMPR2Q13873 1038 aa4.94□□□□□ -1.62
CSDE1-211ENST00000525970 BECN1Q14457 450 aa4.94□□□□□ -1.62
CSDE1-211ENST00000525970 FAM153CQ494X1 144 aa4.94□□□□□ -1.62
CSDE1-211ENST00000525970 DUSP28Q4G0W2 176 aa4.94□□□□□ -1.62
CSDE1-211ENST00000525970 EPHA10Q5JZY3 1008 aa4.94□□□□□ -1.62
CSDE1-211ENST00000525970 TREML2Q5T2D2 321 aa4.94□□□□□ -1.62
CSDE1-211ENST00000525970 UBAP2Q5T6F2 1119 aaKnown RBP4.94□□□□□ -1.62
CSDE1-211ENST00000525970 C1QTNF12Q5T7M4 302 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms