RNA–Protein interactions for RNA: ENST00000525132.1

CSDE1-209, Transcript of cold shock domain containing E1, humanhuman

TSL 5

Gene CSDE1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-209ENST00000525132 RPAP3Q9H6T3 665 aaPredicted RBP3.48□□□□□ -1.85
CSDE1-209ENST00000525132 CCM2LQ9NUG4 571 aaPredicted RBP3.48□□□□□ -1.85
CSDE1-209ENST00000525132 SLC30A1Q9Y6M5 507 aa3.48□□□□□ -1.85
CSDE1-209ENST00000525132 DGKBQ9Y6T7 804 aa3.48□□□□□ -1.85
CSDE1-209ENST00000525132 F5P12259 2224 aa3.48□□□□□ -1.85
CSDE1-209ENST00000525132 WDR81Q562E7 1941 aa3.48□□□□□ -1.85
CSDE1-209ENST00000525132 DNAH1Q9P2D7 4330 aa3.48□□□□□ -1.85
CSDE1-209ENST00000525132 TNRC6BQ9UPQ9 1833 aaKnown RBP3.47□□□□□ -1.85
CSDE1-209ENST00000525132 PRSS38A1L453 326 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 C2orf78A6NCI8 922 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 FAM171A2A8MVW0 826 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 CTIFO43310 598 aaKnown RBP3.47□□□□□ -1.85
CSDE1-209ENST00000525132 TUSC2O75896 110 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 PDCP20941 246 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 C5AR1P21730 350 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 DGKEP52429 567 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 ADKP55263 362 aaKnown RBP3.47□□□□□ -1.85
CSDE1-209ENST00000525132 ADCY2Q08462 1091 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 IFIT5Q13325 482 aaKnown RBP3.47□□□□□ -1.85
CSDE1-209ENST00000525132 SEMA5AQ13591 1074 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 TRIM25Q14258 630 aaKnown RBP3.47□□□□□ -1.85
CSDE1-209ENST00000525132 GRM4Q14833 912 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 DGKDQ16760 1214 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 USP39Q53GS9 565 aaKnown RBP3.47□□□□□ -1.85
CSDE1-209ENST00000525132 ZMAT1Q5H9K5 638 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 PITRM1Q5JRX3 1037 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 TOR2AQ5JU69 321 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 DGKKQ5KSL6 1271 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 DARS2Q6PI48 645 aaKnown RBP3.47□□□□□ -1.85
CSDE1-209ENST00000525132 DBX2Q6ZNG2 339 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 OVCH2Q7RTZ1 564 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 FAM124AQ86V42 546 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 ZNF280BQ86YH2 543 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 GPR135Q8IZ08 494 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 C7orf31Q8N865 590 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 HTR3CQ8WXA8 447 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 CCT6BQ92526 530 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 SMG7Q92540 1137 aaKnown RBP3.47□□□□□ -1.85
CSDE1-209ENST00000525132 DNASE1L2Q92874 299 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 ERCC4Q92889 916 aaPredicted RBP3.47□□□□□ -1.85
CSDE1-209ENST00000525132 PHKBQ93100 1093 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 LENG9Q96B70 501 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 C1GALT1C1Q96EU7 318 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 NEIL1Q96FI4 390 aaPredicted RBP3.47□□□□□ -1.85
CSDE1-209ENST00000525132 C12orf42Q96LP6 360 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 SLC2A13Q96QE2 648 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 ISCA1Q9BUE6 129 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 AGO3Q9H9G7 860 aaKnown RBP3.47□□□□□ -1.85
CSDE1-209ENST00000525132 ASCL3Q9NQ33 180 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 HOXC10Q9NYD6 342 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 KCNG1Q9UIX4 513 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 CDC42EP3Q9UKI2 254 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 CDH7Q9ULB5 785 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 OAZ3Q9UMX2 235 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 PCDHGB3Q9Y5G1 929 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 GPR45Q9Y5Y3 372 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 ZFP37Q9Y6Q3 630 aaPredicted RBP3.47□□□□□ -1.85
CSDE1-209ENST00000525132 ZGRF1Q86YA3 2104 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 COL4A2P08572 1712 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 SPEF2Q9C093 1822 aa3.47□□□□□ -1.85
CSDE1-209ENST00000525132 MCM3APO60318 1980 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 CFAP69A5D8W1 941 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 INPPL1O15357 1258 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 FOXS1O43638 330 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 KDM1AO60341 852 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 ENTPD3O75355 529 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 RFPL2O75678 378 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 RTN3O95197 1032 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-209ENST00000525132 SLC25A27O95847 323 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 LDHCP07864 332 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 FAM163BP0C2L3 166 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 AGXTP21549 392 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 PBX3P40426 434 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 LEPRP48357 1165 aaKnown RBP3.46□□□□□ -1.86
CSDE1-209ENST00000525132 CCT5P48643 541 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 BTKQ06187 659 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 ICAM4Q14773 271 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 PUM3Q15397 648 aaKnown RBP3.46□□□□□ -1.86
CSDE1-209ENST00000525132 CCDC178Q5BJE1 867 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 L1TD1Q5T7N2 865 aaKnown RBP3.46□□□□□ -1.86
CSDE1-209ENST00000525132 RNF220Q5VTB9 566 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 PRAMEF9Q5VWM5 478 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 LYSMD4Q5XG99 296 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 TCTN3Q6NUS6 607 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 KLHDC10Q6PID8 442 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 LVRNQ6Q4G3 990 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 Q6ZSN1 163 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 USP30Q70CQ3 517 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 USP45Q70EL2 814 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 LPCAT2Q7L5N7 544 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 KCNK18Q7Z418 384 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 LIMS2Q7Z4I7 341 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 ADGRE4PQ86SQ3 457 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 SESTD1Q86VW0 696 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 LSMEM2Q8N112 164 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 PDILTQ8N807 584 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 FRMD1Q8N878 549 aa3.46□□□□□ -1.86
CSDE1-209ENST00000525132 PPHLN1Q8NEY8 458 aaKnown RBP3.46□□□□□ -1.86
CSDE1-209ENST00000525132 C9orf43Q8TAL5 461 aaPredicted RBP3.46□□□□□ -1.86
CSDE1-209ENST00000525132 DEPTORQ8TB45 409 aa3.46□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms