RNA–Protein interactions for RNA: ENST00000525013.1

CAPN1-203, Transcript of calpain 1, humanhuman

TSL 2

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-203ENST00000525013 BTBD1Q9H0C5 482 aa19.12■□□□□ 0.65
CAPN1-203ENST00000525013 RSPH9Q9H1X1 276 aaPredicted RBP19.12■□□□□ 0.65
CAPN1-203ENST00000525013 EIF2B4Q9UI10 523 aaKnown RBP19.12■□□□□ 0.65
CAPN1-203ENST00000525013 NCKAP1Q9Y2A7 1128 aa19.12■□□□□ 0.65
CAPN1-203ENST00000525013 DAAM1Q9Y4D1 1078 aa19.12■□□□□ 0.65
CAPN1-203ENST00000525013 A0A1B0GTW7 788 aa19.11■□□□□ 0.65
CAPN1-203ENST00000525013 TARSL2A2RTX5 802 aaKnown RBP19.11■□□□□ 0.65
CAPN1-203ENST00000525013 SEMA4FO95754 770 aa19.11■□□□□ 0.65
CAPN1-203ENST00000525013 FLT3P36888 993 aa19.11■□□□□ 0.65
CAPN1-203ENST00000525013 SULT2A1Q06520 285 aa19.11■□□□□ 0.65
CAPN1-203ENST00000525013 C9orf64Q5T6V5 341 aa19.11■□□□□ 0.65
CAPN1-203ENST00000525013 CXorf57Q6NSI4 855 aaKnown RBP19.11■□□□□ 0.65
CAPN1-203ENST00000525013 LRSAM1Q6UWE0 723 aa19.11■□□□□ 0.65
CAPN1-203ENST00000525013 PHLDB2Q86SQ0 1253 aa19.11■□□□□ 0.65
CAPN1-203ENST00000525013 MINDY1Q8N5J2 469 aa19.11■□□□□ 0.65
CAPN1-203ENST00000525013 AOPEPQ8N6M6 819 aa19.11■□□□□ 0.65
CAPN1-203ENST00000525013 NT5C3BQ969T7 300 aa19.11■□□□□ 0.65
CAPN1-203ENST00000525013 PPP1R9BQ96SB3 815 aa19.11■□□□□ 0.65
CAPN1-203ENST00000525013 NAT10Q9H0A0 1025 aaKnown RBP19.11■□□□□ 0.65
CAPN1-203ENST00000525013 PCED1AQ9H1Q7 454 aa19.11■□□□□ 0.65
CAPN1-203ENST00000525013 C6orf106Q9H6K1 298 aaPredicted RBP19.11■□□□□ 0.65
CAPN1-203ENST00000525013 ARHGEF38Q9NXL2 777 aa19.11■□□□□ 0.65
CAPN1-203ENST00000525013 TMEM63CQ9P1W3 806 aa19.11■□□□□ 0.65
CAPN1-203ENST00000525013 SNX10Q9Y5X0 201 aa19.11■□□□□ 0.65
CAPN1-203ENST00000525013 NYNRINQ9P2P1 1898 aaKnown RBP19.11■□□□□ 0.65
CAPN1-203ENST00000525013 CABIN1Q9Y6J0 2220 aa19.1■□□□□ 0.65
CAPN1-203ENST00000525013 DOCK4Q8N1I0 1966 aa19.1■□□□□ 0.65
CAPN1-203ENST00000525013 BCAT2O15382 392 aaPredicted RBP19.1■□□□□ 0.65
CAPN1-203ENST00000525013 OPHN1O60890 802 aa19.1■□□□□ 0.65
CAPN1-203ENST00000525013 CLDN11O75508 207 aa19.1■□□□□ 0.65
CAPN1-203ENST00000525013 CHRNB2P17787 502 aa19.1■□□□□ 0.65
CAPN1-203ENST00000525013 CSRP1P21291 193 aaKnown RBP19.1■□□□□ 0.65
CAPN1-203ENST00000525013 FMO1Q01740 532 aa19.1■□□□□ 0.65
CAPN1-203ENST00000525013 SFSWAPQ12872 951 aaKnown RBP19.1■□□□□ 0.65
CAPN1-203ENST00000525013 ARID5BQ14865 1188 aa19.1■□□□□ 0.65
CAPN1-203ENST00000525013 NCAPHQ15003 741 aa19.1■□□□□ 0.65
CAPN1-203ENST00000525013 LRRC31Q6UY01 552 aa19.1■□□□□ 0.65
CAPN1-203ENST00000525013 MMAAQ8IVH4 418 aaKnown RBP19.1■□□□□ 0.65
CAPN1-203ENST00000525013 DEFB124Q8NES8 71 aa19.1■□□□□ 0.65
CAPN1-203ENST00000525013 SLC30A5Q8TAD4 765 aa19.1■□□□□ 0.65
CAPN1-203ENST00000525013 PGAP3Q96FM1 320 aaPredicted RBP19.1■□□□□ 0.65
CAPN1-203ENST00000525013 FEM1AQ9BSK4 669 aa19.1■□□□□ 0.65
CAPN1-203ENST00000525013 PABPC3Q9H361 631 aaKnown RBP19.1■□□□□ 0.65
CAPN1-203ENST00000525013 ANLNQ9NQW6 1124 aa19.1■□□□□ 0.65
CAPN1-203ENST00000525013 METTL5Q9NRN9 209 aaKnown RBP19.1■□□□□ 0.65
CAPN1-203ENST00000525013 FBXL12Q9NXK8 326 aa19.1■□□□□ 0.65
CAPN1-203ENST00000525013 VPS28Q9UK41 221 aa19.1■□□□□ 0.65
CAPN1-203ENST00000525013 SCML1Q9UN30 329 aa19.1■□□□□ 0.65
CAPN1-203ENST00000525013 CEP295Q9C0D2 2601 aa19.1■□□□□ 0.65
CAPN1-203ENST00000525013 ITIH6Q6UXX5 1313 aa19.09■□□□□ 0.65
CAPN1-203ENST00000525013 FAM47DPA6NHR8 397 aa19.09■□□□□ 0.65
CAPN1-203ENST00000525013 MID1O15344 667 aa19.09■□□□□ 0.65
CAPN1-203ENST00000525013 CYP1A1P04798 512 aaPredicted RBP19.09■□□□□ 0.65
CAPN1-203ENST00000525013 C7P10643 843 aa19.09■□□□□ 0.65
CAPN1-203ENST00000525013 PSMD8P48556 350 aa19.09■□□□□ 0.65
CAPN1-203ENST00000525013 PLK1P53350 603 aa19.09■□□□□ 0.65
CAPN1-203ENST00000525013 CDH4P55283 916 aa19.09■□□□□ 0.65
CAPN1-203ENST00000525013 CST6Q15828 149 aa19.09■□□□□ 0.65
CAPN1-203ENST00000525013 ACCSLQ4AC99 568 aa19.09■□□□□ 0.65
CAPN1-203ENST00000525013 ANO6Q4KMQ2 910 aa19.09■□□□□ 0.65
CAPN1-203ENST00000525013 TRNP1Q6NT89 227 aa19.09■□□□□ 0.65
CAPN1-203ENST00000525013 TRIM72Q6ZMU5 477 aa19.09■□□□□ 0.65
CAPN1-203ENST00000525013 STK40Q8N2I9 435 aa19.09■□□□□ 0.65
CAPN1-203ENST00000525013 EMC1Q8N766 993 aa19.09■□□□□ 0.65
CAPN1-203ENST00000525013 CFAP57Q96MR6 1250 aa19.09■□□□□ 0.65
CAPN1-203ENST00000525013 C11orf70Q9BRQ4 267 aa19.09■□□□□ 0.65
CAPN1-203ENST00000525013 MUC3BQ9H195 1237 aa19.09■□□□□ 0.65
CAPN1-203ENST00000525013 SLC32A1Q9H598 525 aa19.09■□□□□ 0.65
CAPN1-203ENST00000525013 SGK2Q9HBY8 427 aa19.09■□□□□ 0.65
CAPN1-203ENST00000525013 TMPRSS4Q9NRS4 437 aa19.09■□□□□ 0.65
CAPN1-203ENST00000525013 SEPT11Q9NVA2 429 aaKnown RBP19.09■□□□□ 0.65
CAPN1-203ENST00000525013 TMEM51Q9NW97 253 aa19.09■□□□□ 0.65
CAPN1-203ENST00000525013 SLC25A13Q9UJS0 675 aa19.09■□□□□ 0.65
CAPN1-203ENST00000525013 TMEM59LQ9UK28 342 aa19.09■□□□□ 0.65
CAPN1-203ENST00000525013 LRRC10BA6NIK2 292 aa19.08■□□□□ 0.64
CAPN1-203ENST00000525013 I6L893 689 aaPredicted RBP19.08■□□□□ 0.64
CAPN1-203ENST00000525013 RNASEH2AO75792 299 aaKnown RBP19.08■□□□□ 0.64
CAPN1-203ENST00000525013 CNTN5O94779 1100 aa19.08■□□□□ 0.64
CAPN1-203ENST00000525013 FSBPO95073 299 aa19.08■□□□□ 0.64
CAPN1-203ENST00000525013 ATP1A3P13637 1013 aa19.08■□□□□ 0.64
CAPN1-203ENST00000525013 CEACAM1P13688 526 aa19.08■□□□□ 0.64
CAPN1-203ENST00000525013 MMP8P22894 467 aa19.08■□□□□ 0.64
CAPN1-203ENST00000525013 SLC8A1P32418 973 aa19.08■□□□□ 0.64
CAPN1-203ENST00000525013 ATP11AP98196 1134 aa19.08■□□□□ 0.64
CAPN1-203ENST00000525013 ZNF252P-AS1Q0IIN9 211 aa19.08■□□□□ 0.64
CAPN1-203ENST00000525013 GRIK2Q13002 908 aa19.08■□□□□ 0.64
CAPN1-203ENST00000525013 C5orf22Q49AR2 442 aa19.08■□□□□ 0.64
CAPN1-203ENST00000525013 USP30Q70CQ3 517 aa19.08■□□□□ 0.64
CAPN1-203ENST00000525013 FAM131BQ86XD5 332 aa19.08■□□□□ 0.64
CAPN1-203ENST00000525013 OR52K2Q8NGK3 314 aa19.08■□□□□ 0.64
CAPN1-203ENST00000525013 ALG14Q96F25 216 aa19.08■□□□□ 0.64
CAPN1-203ENST00000525013 ERGIC2Q96RQ1 377 aa19.08■□□□□ 0.64
CAPN1-203ENST00000525013 OMDQ99983 421 aa19.08■□□□□ 0.64
CAPN1-203ENST00000525013 HSD3B7Q9H2F3 369 aa19.08■□□□□ 0.64
CAPN1-203ENST00000525013 ZBTB32Q9Y2Y4 487 aaPredicted RBP19.08■□□□□ 0.64
CAPN1-203ENST00000525013 EPG5Q9HCE0 2579 aa19.07■□□□□ 0.64
CAPN1-203ENST00000525013 A0A1W2PP55 124 aa19.07■□□□□ 0.64
CAPN1-203ENST00000525013 SRGAP2O75044 1071 aa19.07■□□□□ 0.64
CAPN1-203ENST00000525013 IL1BP01584 269 aa19.07■□□□□ 0.64
CAPN1-203ENST00000525013 RHOCP08134 193 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms