RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 FZD8Q9H461 694 aa17.39■□□□□ 0.37
BEST1-203ENST00000524877 ARHGAP20Q9P2F6 1191 aa17.39■□□□□ 0.37
BEST1-203ENST00000524877 FAM95CA0A1B0GW59 222 aa17.39■□□□□ 0.37
BEST1-203ENST00000524877 ALOX15P16050 662 aaPredicted RBP17.39■□□□□ 0.37
BEST1-203ENST00000524877 EPB42P16452 691 aa17.39■□□□□ 0.37
BEST1-203ENST00000524877 GPR1P46091 355 aa17.39■□□□□ 0.37
BEST1-203ENST00000524877 SGO1Q5FBB7 561 aa17.39■□□□□ 0.37
BEST1-203ENST00000524877 RAET1GQ6H3X3 334 aa17.39■□□□□ 0.37
BEST1-203ENST00000524877 MAMDC4Q6UXC1 1216 aa17.39■□□□□ 0.37
BEST1-203ENST00000524877 AGR3Q8TD06 166 aa17.39■□□□□ 0.37
BEST1-203ENST00000524877 PANX3Q96QZ0 392 aa17.39■□□□□ 0.37
BEST1-203ENST00000524877 SERPINB3P29508 390 aa17.38■□□□□ 0.37
BEST1-203ENST00000524877 ST13P50502 369 aaKnown RBP17.38■□□□□ 0.37
BEST1-203ENST00000524877 CHST9Q7L1S5 443 aa17.38■□□□□ 0.37
BEST1-203ENST00000524877 BTN2A3PQ96KV6 586 aa17.38■□□□□ 0.37
BEST1-203ENST00000524877 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.38■□□□□ 0.37
BEST1-203ENST00000524877 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.38■□□□□ 0.37
BEST1-203ENST00000524877 E2F8A0AVK6 867 aa17.38■□□□□ 0.37
BEST1-203ENST00000524877 RNF103O00237 685 aa17.38■□□□□ 0.37
BEST1-203ENST00000524877 O00370 1275 aa17.38■□□□□ 0.37
BEST1-203ENST00000524877 DDX6P26196 483 aaKnown RBP eCLIP17.38■□□□□ 0.37
BEST1-203ENST00000524877 IRF5Q13568 498 aa17.38■□□□□ 0.37
BEST1-203ENST00000524877 INSCQ1MX18 579 aa17.38■□□□□ 0.37
BEST1-203ENST00000524877 TMEM154Q6P9G4 183 aa17.38■□□□□ 0.37
BEST1-203ENST00000524877 FOXR2Q6PJQ5 311 aa17.38■□□□□ 0.37
BEST1-203ENST00000524877 SFMBT1Q9UHJ3 866 aa17.38■□□□□ 0.37
BEST1-203ENST00000524877 A0A0U1RQF3 1178 aa17.38■□□□□ 0.37
BEST1-203ENST00000524877 PSMD12O00232 456 aaPredicted RBP17.38■□□□□ 0.37
BEST1-203ENST00000524877 CDH16O75309 829 aa17.38■□□□□ 0.37
BEST1-203ENST00000524877 RPL17P18621 184 aaKnown RBP17.38■□□□□ 0.37
BEST1-203ENST00000524877 RAD23BP54727 409 aa17.38■□□□□ 0.37
BEST1-203ENST00000524877 PPP2R2AP63151 447 aa17.38■□□□□ 0.37
BEST1-203ENST00000524877 HPCAP84074 193 aa17.38■□□□□ 0.37
BEST1-203ENST00000524877 SP2Q02086 613 aa17.38■□□□□ 0.37
BEST1-203ENST00000524877 ANKS6Q68DC2 871 aa17.38■□□□□ 0.37
BEST1-203ENST00000524877 RIBC1Q8N443 379 aaPredicted RBP17.38■□□□□ 0.37
BEST1-203ENST00000524877 EPS8L1Q8TE68 723 aa17.38■□□□□ 0.37
BEST1-203ENST00000524877 PLD4Q96BZ4 506 aa17.38■□□□□ 0.37
BEST1-203ENST00000524877 GPSM3Q9Y4H4 160 aa17.38■□□□□ 0.37
BEST1-203ENST00000524877 TGFB1I1O43294 461 aa17.38■□□□□ 0.37
BEST1-203ENST00000524877 CLDN11O75508 207 aa17.38■□□□□ 0.37
BEST1-203ENST00000524877 C15orf59Q2T9L4 293 aaPredicted RBP17.38■□□□□ 0.37
BEST1-203ENST00000524877 ANKLE1Q8NAG6 615 aa17.38■□□□□ 0.37
BEST1-203ENST00000524877 MAGEC3Q8TD91 643 aa17.38■□□□□ 0.37
BEST1-203ENST00000524877 LRRC37BQ96QE4 947 aa17.38■□□□□ 0.37
BEST1-203ENST00000524877 IRX2Q9BZI1 471 aaPredicted RBP17.38■□□□□ 0.37
BEST1-203ENST00000524877 H0Y3Z8 333 aa17.38■□□□□ 0.37
BEST1-203ENST00000524877 NRIP1P48552 1158 aa17.38■□□□□ 0.37
BEST1-203ENST00000524877 FAM47EQ6ZV65 393 aa17.38■□□□□ 0.37
BEST1-203ENST00000524877 GLMNQ92990 594 aa17.38■□□□□ 0.37
BEST1-203ENST00000524877 KAT5Q92993 513 aa17.38■□□□□ 0.37
BEST1-203ENST00000524877 FAR2Q96K12 515 aa17.38■□□□□ 0.37
BEST1-203ENST00000524877 TUBA8Q9NY65 449 aaPredicted RBP17.38■□□□□ 0.37
BEST1-203ENST00000524877 CAPN1P07384 714 aa17.37■□□□□ 0.37
BEST1-203ENST00000524877 EEF1B2P24534 225 aaKnown RBP17.37■□□□□ 0.37
BEST1-203ENST00000524877 CORO7P57737 925 aa17.37■□□□□ 0.37
BEST1-203ENST00000524877 POU6F1Q14863 301 aa17.37■□□□□ 0.37
BEST1-203ENST00000524877 POM121L1PQ3SYA9 428 aa17.37■□□□□ 0.37
BEST1-203ENST00000524877 MPP4Q96JB8 637 aa17.37■□□□□ 0.37
BEST1-203ENST00000524877 MLPHQ9BV36 600 aaPredicted RBP17.37■□□□□ 0.37
BEST1-203ENST00000524877 NDE1Q9NXR1 346 aa17.37■□□□□ 0.37
BEST1-203ENST00000524877 MCM8Q9UJA3 840 aa17.37■□□□□ 0.37
BEST1-203ENST00000524877 PTPRJQ12913 1337 aa17.37■□□□□ 0.37
BEST1-203ENST00000524877 TEAD4Q15561 434 aa17.37■□□□□ 0.37
BEST1-203ENST00000524877 TMC5Q6UXY8 1006 aa17.37■□□□□ 0.37
BEST1-203ENST00000524877 TTC7BQ86TV6 843 aa17.37■□□□□ 0.37
BEST1-203ENST00000524877 PHF13Q86YI8 300 aaPredicted RBP17.37■□□□□ 0.37
BEST1-203ENST00000524877 SIX5Q8N196 739 aa17.37■□□□□ 0.37
BEST1-203ENST00000524877 DZANK1Q9NVP4 752 aa17.37■□□□□ 0.37
BEST1-203ENST00000524877 A8MX80 341 aa17.37■□□□□ 0.37
BEST1-203ENST00000524877 AGTP01019 485 aa17.37■□□□□ 0.37
BEST1-203ENST00000524877 POU5F1Q01860 360 aaKnown RBP17.37■□□□□ 0.37
BEST1-203ENST00000524877 MAMLD1Q13495 774 aa17.37■□□□□ 0.37
BEST1-203ENST00000524877 GRAMD1BQ3KR37 738 aa17.37■□□□□ 0.37
BEST1-203ENST00000524877 PDE12Q6L8Q7 609 aaKnown RBP17.37■□□□□ 0.37
BEST1-203ENST00000524877 PRR23CQ6ZRP0 262 aa17.37■□□□□ 0.37
BEST1-203ENST00000524877 SUGP1Q8IWZ8 645 aaKnown RBP17.37■□□□□ 0.37
BEST1-203ENST00000524877 CEP41Q9BYV8 373 aa17.37■□□□□ 0.37
BEST1-203ENST00000524877 NAALADL1Q9UQQ1 740 aa17.37■□□□□ 0.37
BEST1-203ENST00000524877 SYNDIG1LA6NDD5 238 aa17.37■□□□□ 0.37
BEST1-203ENST00000524877 CILPO75339 1184 aa17.37■□□□□ 0.37
BEST1-203ENST00000524877 LRRC55Q6ZSA7 311 aa17.37■□□□□ 0.37
BEST1-203ENST00000524877 ACTL9Q8TC94 416 aa17.37■□□□□ 0.37
BEST1-203ENST00000524877 TBC1D3DA0A087WVF3 549 aa17.36■□□□□ 0.37
BEST1-203ENST00000524877 TBC1D3IA0A087WXS9 549 aa17.36■□□□□ 0.37
BEST1-203ENST00000524877 TBC1D3EA0A087X179 549 aa17.36■□□□□ 0.37
BEST1-203ENST00000524877 TBC1D3KA0A087X1G2 549 aa17.36■□□□□ 0.37
BEST1-203ENST00000524877 TBC1D3FA6NER0 549 aaPredicted RBP17.36■□□□□ 0.37
BEST1-203ENST00000524877 TBC1D3LB9A6J9 549 aa17.36■□□□□ 0.37
BEST1-203ENST00000524877 ATP5HO75947 161 aa17.36■□□□□ 0.37
BEST1-203ENST00000524877 TBC1D3HP0C7X1 549 aa17.36■□□□□ 0.37
BEST1-203ENST00000524877 AMD1P17707 334 aa17.36■□□□□ 0.37
BEST1-203ENST00000524877 ARFIP2P53365 341 aa17.36■□□□□ 0.37
BEST1-203ENST00000524877 LILRA4P59901 499 aa17.36■□□□□ 0.37
BEST1-203ENST00000524877 TBC1D3GQ6DHY5 549 aa17.36■□□□□ 0.37
BEST1-203ENST00000524877 TBC1D3CQ6IPX1 549 aa17.36■□□□□ 0.37
BEST1-203ENST00000524877 TRAPPC5Q8IUR0 188 aa17.36■□□□□ 0.37
BEST1-203ENST00000524877 TBC1D3Q8IZP1 549 aaPredicted RBP17.36■□□□□ 0.37
BEST1-203ENST00000524877 FBXO36Q8NEA4 188 aa17.36■□□□□ 0.37
BEST1-203ENST00000524877 E2F7Q96AV8 911 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms