RNA–Protein interactions for RNA: ENST00000524334.1

HDAC2-217, Transcript of histone deacetylase 2, humanhuman

TSL 4

Gene HDAC2, Length 570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC2-217ENST00000524334 IGLV3-19P01714 112 aa13.19□□□□□ -0.3
HDAC2-217ENST00000524334 MYBL1P10243 752 aa13.19□□□□□ -0.3
HDAC2-217ENST00000524334 SKILP12757 684 aa13.19□□□□□ -0.3
HDAC2-217ENST00000524334 HLA-EP13747 358 aa13.19□□□□□ -0.3
HDAC2-217ENST00000524334 MZF1P28698 734 aaPredicted RBP13.19□□□□□ -0.3
HDAC2-217ENST00000524334 CD6P30203 668 aa13.19□□□□□ -0.3
HDAC2-217ENST00000524334 MPLP40238 635 aa13.19□□□□□ -0.3
HDAC2-217ENST00000524334 DHPSP49366 369 aaPredicted RBP13.19□□□□□ -0.3
HDAC2-217ENST00000524334 TPMTP51580 245 aa13.19□□□□□ -0.3
HDAC2-217ENST00000524334 COPAP53621 1224 aa13.19□□□□□ -0.3
HDAC2-217ENST00000524334 KRT83P78385 493 aa13.19□□□□□ -0.3
HDAC2-217ENST00000524334 NRG1Q02297 640 aaPredicted RBP13.19□□□□□ -0.3
HDAC2-217ENST00000524334 RPL6Q02878 288 aaKnown RBP13.19□□□□□ -0.3
HDAC2-217ENST00000524334 CREB5Q02930 508 aa13.19□□□□□ -0.3
HDAC2-217ENST00000524334 MAMLD1Q13495 774 aa13.19□□□□□ -0.3
HDAC2-217ENST00000524334 PLA2G2CQ5R387 149 aa13.19□□□□□ -0.3
HDAC2-217ENST00000524334 ZNF783Q6ZMS7 281 aa13.19□□□□□ -0.3
HDAC2-217ENST00000524334 SLFN11Q7Z7L1 901 aa13.19□□□□□ -0.3
HDAC2-217ENST00000524334 DRC7Q8IY82 874 aa13.19□□□□□ -0.3
HDAC2-217ENST00000524334 TMEFF1Q8IYR6 380 aa13.19□□□□□ -0.3
HDAC2-217ENST00000524334 FRMD1Q8N878 549 aa13.19□□□□□ -0.3
HDAC2-217ENST00000524334 NTAN1Q96AB6 310 aa13.19□□□□□ -0.3
HDAC2-217ENST00000524334 ERLEC1Q96DZ1 483 aa13.19□□□□□ -0.3
HDAC2-217ENST00000524334 ALG14Q96F25 216 aa13.19□□□□□ -0.3
HDAC2-217ENST00000524334 MYO19Q96H55 970 aa13.19□□□□□ -0.3
HDAC2-217ENST00000524334 MCEEQ96PE7 176 aa13.19□□□□□ -0.3
HDAC2-217ENST00000524334 C2orf49Q9BVC5 232 aaPredicted RBP13.19□□□□□ -0.3
HDAC2-217ENST00000524334 ZYG11BQ9C0D3 744 aa13.19□□□□□ -0.3
HDAC2-217ENST00000524334 MUC3BQ9H195 1237 aa13.19□□□□□ -0.3
HDAC2-217ENST00000524334 ISCUQ9H1K1 167 aa13.19□□□□□ -0.3
HDAC2-217ENST00000524334 SLC6A17Q9H1V8 727 aa13.19□□□□□ -0.3
HDAC2-217ENST00000524334 MRPL47Q9HD33 250 aaKnown RBP13.19□□□□□ -0.3
HDAC2-217ENST00000524334 PARD6AQ9NPB6 346 aa13.19□□□□□ -0.3
HDAC2-217ENST00000524334 TAS2R14Q9NYV8 317 aa13.19□□□□□ -0.3
HDAC2-217ENST00000524334 USP36Q9P275 1121 aaKnown RBP13.19□□□□□ -0.3
HDAC2-217ENST00000524334 VPS28Q9UK41 221 aa13.19□□□□□ -0.3
HDAC2-217ENST00000524334 SCML1Q9UN30 329 aa13.19□□□□□ -0.3
HDAC2-217ENST00000524334 CYP8B1Q9UNU6 501 aa13.19□□□□□ -0.3
HDAC2-217ENST00000524334 CFAP54Q96N23 3096 aa13.19□□□□□ -0.3
HDAC2-217ENST00000524334 EDDM13A0A1B0GTR0 161 aa13.18□□□□□ -0.3
HDAC2-217ENST00000524334 CNTN5O94779 1100 aa13.18□□□□□ -0.3
HDAC2-217ENST00000524334 DNTTP04053 509 aa13.18□□□□□ -0.3
HDAC2-217ENST00000524334 RHOCP08134 193 aa13.18□□□□□ -0.3
HDAC2-217ENST00000524334 OR1E1P30953 314 aa13.18□□□□□ -0.3
HDAC2-217ENST00000524334 HOXD12P35452 270 aa13.18□□□□□ -0.3
HDAC2-217ENST00000524334 GGCXP38435 758 aa13.18□□□□□ -0.3
HDAC2-217ENST00000524334 CTSOP43234 321 aaPredicted RBP13.18□□□□□ -0.3
HDAC2-217ENST00000524334 IRAK1P51617 712 aa13.18□□□□□ -0.3
HDAC2-217ENST00000524334 AIF1P55008 147 aa13.18□□□□□ -0.3
HDAC2-217ENST00000524334 HDAC4P56524 1084 aa13.18□□□□□ -0.3
HDAC2-217ENST00000524334 RPL7AP62424 266 aaKnown RBP13.18□□□□□ -0.3
HDAC2-217ENST00000524334 TRIM14Q14142 442 aa13.18□□□□□ -0.3
HDAC2-217ENST00000524334 ALFQ53S48 1182 aa13.18□□□□□ -0.3
HDAC2-217ENST00000524334 TDRD12Q587J7 1177 aaKnown RBP13.18□□□□□ -0.3
HDAC2-217ENST00000524334 LYSMD4Q5XG99 296 aa13.18□□□□□ -0.3
HDAC2-217ENST00000524334 E4F1Q66K89 784 aaPredicted RBP13.18□□□□□ -0.3
HDAC2-217ENST00000524334 HGSNATQ68CP4 663 aa13.18□□□□□ -0.3
HDAC2-217ENST00000524334 SPECC1LQ69YQ0 1117 aa13.18□□□□□ -0.3
HDAC2-217ENST00000524334 PLEKHA7Q6IQ23 1121 aa13.18□□□□□ -0.3
HDAC2-217ENST00000524334 PRR23CQ6ZRP0 262 aa13.18□□□□□ -0.3
HDAC2-217ENST00000524334 CYP2U1Q7Z449 544 aa13.18□□□□□ -0.3
HDAC2-217ENST00000524334 GAS2L3Q86XJ1 694 aa13.18□□□□□ -0.3
HDAC2-217ENST00000524334 C12orf50Q8NA57 414 aaPredicted RBP13.18□□□□□ -0.3
HDAC2-217ENST00000524334 CADM4Q8NFZ8 388 aa13.18□□□□□ -0.3
HDAC2-217ENST00000524334 FOXJ1Q92949 421 aa13.18□□□□□ -0.3
HDAC2-217ENST00000524334 NCAPGQ9BPX3 1015 aa13.18□□□□□ -0.3
HDAC2-217ENST00000524334 RSPH9Q9H1X1 276 aaPredicted RBP13.18□□□□□ -0.3
HDAC2-217ENST00000524334 TMPRSS4Q9NRS4 437 aa13.18□□□□□ -0.3
HDAC2-217ENST00000524334 WSB2Q9NYS7 404 aaPredicted RBP13.18□□□□□ -0.3
HDAC2-217ENST00000524334 ADAMTS1Q9UHI8 967 aa13.18□□□□□ -0.3
HDAC2-217ENST00000524334 SLCO3A1Q9UIG8 710 aa13.18□□□□□ -0.3
HDAC2-217ENST00000524334 SLC25A13Q9UJS0 675 aa13.18□□□□□ -0.3
HDAC2-217ENST00000524334 OR51B4Q9Y5P0 310 aa13.18□□□□□ -0.3
HDAC2-217ENST00000524334 SCINQ9Y6U3 715 aa13.18□□□□□ -0.3
HDAC2-217ENST00000524334 KIAA1549LQ6ZVL6 1849 aa13.18□□□□□ -0.3
HDAC2-217ENST00000524334 ILVBLA1L0T0 632 aa13.17□□□□□ -0.3
HDAC2-217ENST00000524334 TMEM191CA6NGB0 347 aa13.17□□□□□ -0.3
HDAC2-217ENST00000524334 GYPCP04921 128 aa13.17□□□□□ -0.3
HDAC2-217ENST00000524334 PLEKP08567 350 aaPredicted RBP13.17□□□□□ -0.3
HDAC2-217ENST00000524334 TPM1P09493 284 aa13.17□□□□□ -0.3
HDAC2-217ENST00000524334 ETFBP38117 255 aa13.17□□□□□ -0.3
HDAC2-217ENST00000524334 RPS14P62263 151 aaKnown RBP13.17□□□□□ -0.3
HDAC2-217ENST00000524334 CCDC173Q0VFZ6 552 aa13.17□□□□□ -0.3
HDAC2-217ENST00000524334 SCAPQ12770 1279 aa13.17□□□□□ -0.3
HDAC2-217ENST00000524334 TSR1Q2NL82 804 aaKnown RBP13.17□□□□□ -0.3
HDAC2-217ENST00000524334 SYCP2LQ5T4T6 812 aa13.17□□□□□ -0.3
HDAC2-217ENST00000524334 C9orf64Q5T6V5 341 aa13.17□□□□□ -0.3
HDAC2-217ENST00000524334 ZNF776Q68DI1 518 aaPredicted RBP13.17□□□□□ -0.3
HDAC2-217ENST00000524334 SCYL2Q6P3W7 929 aa13.17□□□□□ -0.3
HDAC2-217ENST00000524334 RABEPKQ7Z6M1 372 aa13.17□□□□□ -0.3
HDAC2-217ENST00000524334 SYT12Q8IV01 421 aa13.17□□□□□ -0.3
HDAC2-217ENST00000524334 ZNF366Q8N895 744 aa13.17□□□□□ -0.3
HDAC2-217ENST00000524334 ZNF419Q96HQ0 510 aaPredicted RBP13.17□□□□□ -0.3
HDAC2-217ENST00000524334 RPL10LQ96L21 214 aaKnown RBP13.17□□□□□ -0.3
HDAC2-217ENST00000524334 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.17□□□□□ -0.3
HDAC2-217ENST00000524334 PCED1AQ9H1Q7 454 aa13.17□□□□□ -0.3
HDAC2-217ENST00000524334 MPP6Q9NZW5 540 aa13.17□□□□□ -0.3
HDAC2-217ENST00000524334 NCKAP1Q9Y2A7 1128 aa13.17□□□□□ -0.3
HDAC2-217ENST00000524334 SNX10Q9Y5X0 201 aa13.17□□□□□ -0.3
HDAC2-217ENST00000524334 TTC34A8MYJ7 566 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms