RNA–Protein interactions for RNA: ENST00000523873.5

VEGFA-224, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 784 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-224ENST00000523873 MMP17Q9ULZ9 603 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 SLC8A2Q9UPR5 921 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 HCN4Q9Y3Q4 1203 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 STON1Q9Y6Q2 735 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 PLXND1Q9Y4D7 1925 aa13.19□□□□□ -0.3
VEGFA-224ENST00000523873 THADAQ6YHU6 1953 aa13.18□□□□□ -0.3
VEGFA-224ENST00000523873 A0A0D9SEW6 157 aa13.18□□□□□ -0.3
VEGFA-224ENST00000523873 RARAP10276 462 aa13.18□□□□□ -0.3
VEGFA-224ENST00000523873 HOXB2P14652 356 aa13.18□□□□□ -0.3
VEGFA-224ENST00000523873 EPHB2P29323 1055 aa13.18□□□□□ -0.3
VEGFA-224ENST00000523873 OR1E1P30953 314 aa13.18□□□□□ -0.3
VEGFA-224ENST00000523873 NTSR1P30989 418 aa13.18□□□□□ -0.3
VEGFA-224ENST00000523873 PCK1P35558 622 aa13.18□□□□□ -0.3
VEGFA-224ENST00000523873 NOP2P46087 812 aaKnown RBP13.18□□□□□ -0.3
VEGFA-224ENST00000523873 FNTBP49356 437 aa13.18□□□□□ -0.3
VEGFA-224ENST00000523873 GSDMDP57764 484 aa13.18□□□□□ -0.3
VEGFA-224ENST00000523873 TPI1P60174 286 aa13.18□□□□□ -0.3
VEGFA-224ENST00000523873 ACAP1Q15027 740 aa13.18□□□□□ -0.3
VEGFA-224ENST00000523873 EIF4HQ15056 248 aaKnown RBP13.18□□□□□ -0.3
VEGFA-224ENST00000523873 ATP13A4Q4VNC1 1196 aa13.18□□□□□ -0.3
VEGFA-224ENST00000523873 FNDC3BQ53EP0 1204 aaKnown RBP13.18□□□□□ -0.3
VEGFA-224ENST00000523873 PPP6R3Q5H9R7 873 aaPredicted RBP13.18□□□□□ -0.3
VEGFA-224ENST00000523873 EOGTQ5NDL2 527 aa13.18□□□□□ -0.3
VEGFA-224ENST00000523873 KIAA1211LQ6NV74 962 aa13.18□□□□□ -0.3
VEGFA-224ENST00000523873 NLRP14Q86W24 1093 aa13.18□□□□□ -0.3
VEGFA-224ENST00000523873 ZNF557Q8N988 423 aaPredicted RBP13.18□□□□□ -0.3
VEGFA-224ENST00000523873 PSMB7Q99436 277 aa13.18□□□□□ -0.3
VEGFA-224ENST00000523873 GOLPH3Q9H4A6 298 aa13.18□□□□□ -0.3
VEGFA-224ENST00000523873 MTG2Q9H4K7 406 aa13.18□□□□□ -0.3
VEGFA-224ENST00000523873 SALL4Q9UJQ4 1053 aa13.18□□□□□ -0.3
VEGFA-224ENST00000523873 TBC1D30Q9Y2I9 924 aa13.18□□□□□ -0.3
VEGFA-224ENST00000523873 HYOU1Q9Y4L1 999 aa13.18□□□□□ -0.3
VEGFA-224ENST00000523873 OR51B4Q9Y5P0 310 aa13.18□□□□□ -0.3
VEGFA-224ENST00000523873 EEF2KO00418 725 aaKnown RBP13.17□□□□□ -0.3
VEGFA-224ENST00000523873 BUB1O43683 1085 aa13.17□□□□□ -0.3
VEGFA-224ENST00000523873 SNAP91O60641 907 aa13.17□□□□□ -0.3
VEGFA-224ENST00000523873 MTA2O94776 668 aa13.17□□□□□ -0.3
VEGFA-224ENST00000523873 RHOQP17081 205 aa13.17□□□□□ -0.3
VEGFA-224ENST00000523873 GOT1P17174 413 aa13.17□□□□□ -0.3
VEGFA-224ENST00000523873 GLDCP23378 1020 aa13.17□□□□□ -0.3
VEGFA-224ENST00000523873 STK19P49842 368 aaPredicted RBP13.17□□□□□ -0.3
VEGFA-224ENST00000523873 NUBP1P53384 320 aa13.17□□□□□ -0.3
VEGFA-224ENST00000523873 AIF1P55008 147 aa13.17□□□□□ -0.3
VEGFA-224ENST00000523873 CRY1Q16526 586 aa13.17□□□□□ -0.3
VEGFA-224ENST00000523873 ACBD5Q5T8D3 534 aaPredicted RBP13.17□□□□□ -0.3
VEGFA-224ENST00000523873 MAMSTRQ6ZN01 415 aa13.17□□□□□ -0.3
VEGFA-224ENST00000523873 RHOT2Q8IXI1 618 aa13.17□□□□□ -0.3
VEGFA-224ENST00000523873 NETO2Q8NC67 525 aa13.17□□□□□ -0.3
VEGFA-224ENST00000523873 TSTD1Q8NFU3 115 aa13.17□□□□□ -0.3
VEGFA-224ENST00000523873 CCDC26Q8TAB7 109 aa13.17□□□□□ -0.3
VEGFA-224ENST00000523873 TTC17Q96AE7 1141 aa13.17□□□□□ -0.3
VEGFA-224ENST00000523873 RPL10LQ96L21 214 aaKnown RBP13.17□□□□□ -0.3
VEGFA-224ENST00000523873 MRGPRX3Q96LB0 322 aa13.17□□□□□ -0.3
VEGFA-224ENST00000523873 EPAS1Q99814 870 aa13.17□□□□□ -0.3
VEGFA-224ENST00000523873 FEM1AQ9BSK4 669 aa13.17□□□□□ -0.3
VEGFA-224ENST00000523873 LACRTQ9GZZ8 138 aa13.17□□□□□ -0.3
VEGFA-224ENST00000523873 MUC3BQ9H195 1237 aa13.17□□□□□ -0.3
VEGFA-224ENST00000523873 SLC6A17Q9H1V8 727 aa13.17□□□□□ -0.3
VEGFA-224ENST00000523873 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.17□□□□□ -0.3
VEGFA-224ENST00000523873 TMEM248Q9NWD8 314 aa13.17□□□□□ -0.3
VEGFA-224ENST00000523873 VPS28Q9UK41 221 aa13.17□□□□□ -0.3
VEGFA-224ENST00000523873 ERVW-1Q9UQF0 538 aa13.17□□□□□ -0.3
VEGFA-224ENST00000523873 DUSP10Q9Y6W6 482 aa13.17□□□□□ -0.3
VEGFA-224ENST00000523873 ABCA7Q8IZY2 2146 aa13.16□□□□□ -0.3
VEGFA-224ENST00000523873 A0A1W2PQF6 199 aa13.16□□□□□ -0.3
VEGFA-224ENST00000523873 TCRBV21S2A2A0A5A6 115 aa13.16□□□□□ -0.3
VEGFA-224ENST00000523873 TTC34A8MYJ7 566 aa13.16□□□□□ -0.3
VEGFA-224ENST00000523873 TIMM44O43615 452 aa13.16□□□□□ -0.3
VEGFA-224ENST00000523873 PAPSS2O95340 614 aaPredicted RBP13.16□□□□□ -0.3
VEGFA-224ENST00000523873 IPO7O95373 1038 aaKnown RBP13.16□□□□□ -0.3
VEGFA-224ENST00000523873 MOCS3O95396 460 aa13.16□□□□□ -0.3
VEGFA-224ENST00000523873 DLDP09622 509 aaKnown RBP13.16□□□□□ -0.3
VEGFA-224ENST00000523873 TNNT1P13805 278 aa13.16□□□□□ -0.3
VEGFA-224ENST00000523873 ACVRL1P37023 503 aa13.16□□□□□ -0.3
VEGFA-224ENST00000523873 MRE11P49959 708 aa13.16□□□□□ -0.3
VEGFA-224ENST00000523873 PLK1P53350 603 aa13.16□□□□□ -0.3
VEGFA-224ENST00000523873 HSF5Q4G112 596 aaPredicted RBP13.16□□□□□ -0.3
VEGFA-224ENST00000523873 C6orf118Q5T5N4 469 aa13.16□□□□□ -0.3
VEGFA-224ENST00000523873 SDE2Q6IQ49 451 aa13.16□□□□□ -0.3
VEGFA-224ENST00000523873 ANO7Q6IWH7 933 aa13.16□□□□□ -0.3
VEGFA-224ENST00000523873 SERPINA13PQ6UXR4 307 aa13.16□□□□□ -0.3
VEGFA-224ENST00000523873 TRMT11Q7Z4G4 463 aaKnown RBP13.16□□□□□ -0.3
VEGFA-224ENST00000523873 KIAA1328Q86T90 577 aa13.16□□□□□ -0.3
VEGFA-224ENST00000523873 SETD3Q86TU7 594 aaPredicted RBP13.16□□□□□ -0.3
VEGFA-224ENST00000523873 RTL3Q8N8U3 475 aaKnown RBP13.16□□□□□ -0.3
VEGFA-224ENST00000523873 KCNV2Q8TDN2 545 aa13.16□□□□□ -0.3
VEGFA-224ENST00000523873 MYO19Q96H55 970 aa13.16□□□□□ -0.3
VEGFA-224ENST00000523873 GABRG3Q99928 467 aa13.16□□□□□ -0.3
VEGFA-224ENST00000523873 NCAPGQ9BPX3 1015 aa13.16□□□□□ -0.3
VEGFA-224ENST00000523873 SPON2Q9BUD6 331 aa13.16□□□□□ -0.3
VEGFA-224ENST00000523873 TPSD1Q9BZJ3 242 aa13.16□□□□□ -0.3
VEGFA-224ENST00000523873 PCDH18Q9HCL0 1135 aa13.16□□□□□ -0.3
VEGFA-224ENST00000523873 CWC15Q9P013 229 aaKnown RBP13.16□□□□□ -0.3
VEGFA-224ENST00000523873 TRIM10Q9UDY6 481 aa13.16□□□□□ -0.3
VEGFA-224ENST00000523873 SLCO3A1Q9UIG8 710 aa13.16□□□□□ -0.3
VEGFA-224ENST00000523873 FBXO4Q9UKT5 387 aa13.16□□□□□ -0.3
VEGFA-224ENST00000523873 MFHAS1Q9Y4C4 1052 aa13.16□□□□□ -0.3
VEGFA-224ENST00000523873 ACTL7AQ9Y615 435 aa13.16□□□□□ -0.3
VEGFA-224ENST00000523873 R4GN57 208 aa13.16□□□□□ -0.3
VEGFA-224ENST00000523873 RALGAPA1Q6GYQ0 2036 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms