RNA–Protein interactions for RNA: ENST00000523517.5

IKBKB-228, Transcript of inhibitor of nuclear factor kappa B kinase subunit beta, humanhuman

TSL 1 (best)

Gene IKBKB, Length 2,378 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IKBKB-228ENST00000523517 CDC16Q13042 620 aa18.28■□□□□ 0.52
IKBKB-228ENST00000523517 SNAPC2Q13487 334 aa18.28■□□□□ 0.52
IKBKB-228ENST00000523517 FRG1Q14331 258 aaKnown RBP18.28■□□□□ 0.52
IKBKB-228ENST00000523517 XKR4Q5GH76 650 aa18.28■□□□□ 0.52
IKBKB-228ENST00000523517 FAM72AQ5TYM5 149 aa18.28■□□□□ 0.52
IKBKB-228ENST00000523517 RNF220Q5VTB9 566 aa18.28■□□□□ 0.52
IKBKB-228ENST00000523517 FAM72DQ6L9T8 149 aa18.28■□□□□ 0.52
IKBKB-228ENST00000523517 HFE2Q6ZVN8 426 aa18.28■□□□□ 0.52
IKBKB-228ENST00000523517 PAQR9Q6ZVX9 377 aa18.28■□□□□ 0.52
IKBKB-228ENST00000523517 PDZD4Q76G19 769 aaPredicted RBP18.28■□□□□ 0.52
IKBKB-228ENST00000523517 FAM72BQ86X60 149 aa18.28■□□□□ 0.52
IKBKB-228ENST00000523517 SIX6OS1Q8N1H7 587 aa18.28■□□□□ 0.52
IKBKB-228ENST00000523517 RNF169Q8NCN4 708 aa18.28■□□□□ 0.52
IKBKB-228ENST00000523517 GTF3C2Q8WUA4 911 aaPredicted RBP18.28■□□□□ 0.52
IKBKB-228ENST00000523517 PPP1R13LQ8WUF5 828 aa18.28■□□□□ 0.52
IKBKB-228ENST00000523517 TSC22D3Q99576 134 aa18.28■□□□□ 0.52
IKBKB-228ENST00000523517 SHCBP1LQ9BZQ2 653 aa18.28■□□□□ 0.52
IKBKB-228ENST00000523517 PIN4Q9Y237 131 aaKnown RBP18.28■□□□□ 0.52
IKBKB-228ENST00000523517 ZCWPW2A0A1B0GU75 182 aa18.28■□□□□ 0.52
IKBKB-228ENST00000523517 ZNF189O75820 626 aaPredicted RBP18.28■□□□□ 0.52
IKBKB-228ENST00000523517 MPOP05164 745 aa18.28■□□□□ 0.52
IKBKB-228ENST00000523517 LILRA4P59901 499 aa18.28■□□□□ 0.52
IKBKB-228ENST00000523517 USP4Q13107 963 aa18.28■□□□□ 0.52
IKBKB-228ENST00000523517 CCNIQ14094 377 aa18.28■□□□□ 0.52
IKBKB-228ENST00000523517 PHTF2Q8N3S3 785 aa18.28■□□□□ 0.52
IKBKB-228ENST00000523517 ZNF483Q8TF39 744 aaPredicted RBP18.28■□□□□ 0.52
IKBKB-228ENST00000523517 PYDC1Q8WXC3 89 aa18.28■□□□□ 0.52
IKBKB-228ENST00000523517 OXCT2Q9BYC2 517 aaPredicted RBP18.28■□□□□ 0.52
IKBKB-228ENST00000523517 CDH19Q9H159 772 aa18.28■□□□□ 0.52
IKBKB-228ENST00000523517 COG4Q9H9E3 785 aa18.28■□□□□ 0.52
IKBKB-228ENST00000523517 CASS4Q9NQ75 786 aa18.28■□□□□ 0.52
IKBKB-228ENST00000523517 NRCAMQ92823 1304 aa18.28■□□□□ 0.52
IKBKB-228ENST00000523517 A0A096LPK6 155 aa18.27■□□□□ 0.52
IKBKB-228ENST00000523517 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP18.27■□□□□ 0.52
IKBKB-228ENST00000523517 G3V2L1 256 aa18.27■□□□□ 0.52
IKBKB-228ENST00000523517 PDE5AO76074 875 aa18.27■□□□□ 0.52
IKBKB-228ENST00000523517 HSPA4LO95757 839 aa18.27■□□□□ 0.52
IKBKB-228ENST00000523517 FESP07332 822 aa18.27■□□□□ 0.52
IKBKB-228ENST00000523517 F7P08709 466 aaPredicted RBP18.27■□□□□ 0.52
IKBKB-228ENST00000523517 PTPN1P18031 435 aaKnown RBP18.27■□□□□ 0.52
IKBKB-228ENST00000523517 ITGAXP20702 1163 aa18.27■□□□□ 0.52
IKBKB-228ENST00000523517 ACAT1P24752 427 aaKnown RBP18.27■□□□□ 0.52
IKBKB-228ENST00000523517 ANKRD20A4Q4UJ75 823 aa18.27■□□□□ 0.52
IKBKB-228ENST00000523517 EPGNQ6UW88 154 aa18.27■□□□□ 0.52
IKBKB-228ENST00000523517 NAPRTQ6XQN6 538 aa18.27■□□□□ 0.52
IKBKB-228ENST00000523517 RAPH1Q70E73 1250 aa18.27■□□□□ 0.52
IKBKB-228ENST00000523517 TOP6BLQ8N6T0 577 aa18.27■□□□□ 0.52
IKBKB-228ENST00000523517 ZNF781Q8N8C0 355 aa18.27■□□□□ 0.52
IKBKB-228ENST00000523517 DNAAF3Q8N9W5 541 aa18.27■□□□□ 0.52
IKBKB-228ENST00000523517 PHC3Q8NDX5 983 aa18.27■□□□□ 0.52
IKBKB-228ENST00000523517 SLC9A7Q96T83 725 aa18.27■□□□□ 0.52
IKBKB-228ENST00000523517 CDH22Q9UJ99 828 aa18.27■□□□□ 0.52
IKBKB-228ENST00000523517 RAD54BQ9Y620 910 aa18.27■□□□□ 0.52
IKBKB-228ENST00000523517 LOC100653049A0A140TA62 436 aa18.27■□□□□ 0.52
IKBKB-228ENST00000523517 ZBTB24O43167 697 aaPredicted RBP18.27■□□□□ 0.52
IKBKB-228ENST00000523517 KRT34O76011 436 aa18.27■□□□□ 0.52
IKBKB-228ENST00000523517 SORBS2O94875 1100 aaKnown RBP18.27■□□□□ 0.52
IKBKB-228ENST00000523517 UBTFL6P0CB48 400 aaPredicted RBP18.27■□□□□ 0.52
IKBKB-228ENST00000523517 SMIM10L2AP0DMW4 78 aa18.27■□□□□ 0.52
IKBKB-228ENST00000523517 SMIM10L2BP0DMW5 78 aa18.27■□□□□ 0.52
IKBKB-228ENST00000523517 PRDX6P30041 224 aa18.27■□□□□ 0.52
IKBKB-228ENST00000523517 AXLP30530 894 aa18.27■□□□□ 0.52
IKBKB-228ENST00000523517 FSCBQ5H9T9 825 aa18.27■□□□□ 0.52
IKBKB-228ENST00000523517 CFAP157Q5JU67 520 aa18.27■□□□□ 0.52
IKBKB-228ENST00000523517 DHDDSQ86SQ9 333 aa18.27■□□□□ 0.52
IKBKB-228ENST00000523517 CLEC14AQ86T13 490 aa18.27■□□□□ 0.52
IKBKB-228ENST00000523517 SLC7A14Q8TBB6 771 aa18.27■□□□□ 0.52
IKBKB-228ENST00000523517 SLC26A7Q8TE54 656 aa18.27■□□□□ 0.52
IKBKB-228ENST00000523517 TSPAN18Q96SJ8 248 aa18.27■□□□□ 0.52
IKBKB-228ENST00000523517 ANLNQ9NQW6 1124 aa18.27■□□□□ 0.52
IKBKB-228ENST00000523517 SMIM35A0A1B0GVV1 85 aa18.26■□□□□ 0.51
IKBKB-228ENST00000523517 TMEM114B3SHH9 223 aa18.26■□□□□ 0.51
IKBKB-228ENST00000523517 DCXO43602 365 aa18.26■□□□□ 0.51
IKBKB-228ENST00000523517 AHCYL1O43865 530 aa18.26■□□□□ 0.51
IKBKB-228ENST00000523517 FYNP06241 537 aa18.26■□□□□ 0.51
IKBKB-228ENST00000523517 LYNP07948 512 aa18.26■□□□□ 0.51
IKBKB-228ENST00000523517 CYP2C9P11712 490 aa18.26■□□□□ 0.51
IKBKB-228ENST00000523517 TKTL1P51854 596 aa18.26■□□□□ 0.51
IKBKB-228ENST00000523517 IRF9Q00978 393 aa18.26■□□□□ 0.51
IKBKB-228ENST00000523517 PPIDQ08752 370 aaKnown RBP18.26■□□□□ 0.51
IKBKB-228ENST00000523517 HSP90AA5PQ58FG0 334 aa18.26■□□□□ 0.51
IKBKB-228ENST00000523517 KCTD11Q693B1 232 aa18.26■□□□□ 0.51
IKBKB-228ENST00000523517 CLEC20AQ6ZU45 233 aa18.26■□□□□ 0.51
IKBKB-228ENST00000523517 TMEM40Q8WWA1 233 aa18.26■□□□□ 0.51
IKBKB-228ENST00000523517 CAB39LQ9H9S4 337 aa18.26■□□□□ 0.51
IKBKB-228ENST00000523517 CYP4F11Q9HBI6 524 aa18.26■□□□□ 0.51
IKBKB-228ENST00000523517 PDP2Q9P2J9 529 aa18.26■□□□□ 0.51
IKBKB-228ENST00000523517 NRP1O14786 923 aa18.26■□□□□ 0.51
IKBKB-228ENST00000523517 NCAM2O15394 837 aa18.26■□□□□ 0.51
IKBKB-228ENST00000523517 STRNO43815 780 aa18.26■□□□□ 0.51
IKBKB-228ENST00000523517 CYP2B6P20813 491 aa18.26■□□□□ 0.51
IKBKB-228ENST00000523517 AIF1P55008 147 aa18.26■□□□□ 0.51
IKBKB-228ENST00000523517 TPI1P60174 286 aa18.26■□□□□ 0.51
IKBKB-228ENST00000523517 SEMA3BQ13214 749 aa18.26■□□□□ 0.51
IKBKB-228ENST00000523517 CUL3Q13618 768 aa18.26■□□□□ 0.51
IKBKB-228ENST00000523517 DLG2Q15700 870 aa18.26■□□□□ 0.51
IKBKB-228ENST00000523517 UBXN11Q5T124 520 aa18.26■□□□□ 0.51
IKBKB-228ENST00000523517 RNF111Q6ZNA4 994 aa18.26■□□□□ 0.51
IKBKB-228ENST00000523517 FRMD7Q6ZUT3 714 aa18.26■□□□□ 0.51
IKBKB-228ENST00000523517 DEFB107AQ8IZN7 70 aa18.26■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms