RNA–Protein interactions for RNA: ENST00000523483.5

SDCBP-212, Transcript of syndecan binding protein, humanhuman

TSL 2 BASIC

Gene SDCBP, Length 3,589 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-212ENST00000523483 ITIH3Q06033 890 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 LY6G5CQ5SRR4 150 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 TANGO2Q6ICL3 276 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 BZW1Q7L1Q6 419 aaKnown RBP9.59□□□□□ -0.87
SDCBP-212ENST00000523483 KDELC2Q7Z4H8 507 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 MMGT1Q8N4V1 131 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 CELF5Q8N6W0 485 aaKnown RBP9.59□□□□□ -0.87
SDCBP-212ENST00000523483 FAF2Q96CS3 445 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 LRRC3BQ96PB8 259 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 KIF9Q9HAQ2 790 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 EFR3BQ9Y2G0 817 aa9.59□□□□□ -0.87
SDCBP-212ENST00000523483 MTCL1Q9Y4B5 1905 aaKnown RBP9.59□□□□□ -0.87
SDCBP-212ENST00000523483 JCHAINP01591 159 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 RHOQP17081 205 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 PTPN7P35236 360 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 FNTAP49354 379 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 PAPOLAP51003 745 aaKnown RBP9.58□□□□□ -0.88
SDCBP-212ENST00000523483 RNF219Q5W0B1 726 aaPredicted RBP9.58□□□□□ -0.88
SDCBP-212ENST00000523483 LINGO4Q6UY18 593 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 PID1Q7Z2X4 250 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 PARD6BQ9BYG5 372 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 ATP13A1Q9HD20 1204 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 USP15Q9Y4E8 981 aaPredicted RBP9.58□□□□□ -0.88
SDCBP-212ENST00000523483 ACTL7AQ9Y615 435 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 A0A1B0GVM2 712 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 TCAF2A6NFQ2 919 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 RASA4BC9J798 803 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 E7EVH7 732 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 TRIM24O15164 1050 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 RASA4O43374 803 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 MX2P20592 715 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 CALCOCO2Q13137 446 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 TAZQ16635 292 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 P3H1Q32P28 736 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 FSCBQ5H9T9 825 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 ARHGEF18Q6ZSZ5 1173 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 RNF135Q8IUD6 432 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 CDKL3Q8IVW4 592 aaPredicted RBP9.58□□□□□ -0.88
SDCBP-212ENST00000523483 HJURPQ8NCD3 748 aaPredicted RBP9.58□□□□□ -0.88
SDCBP-212ENST00000523483 SLC35B2Q8TB61 432 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 BPIFB1Q8TDL5 484 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 RSPRY1Q96DX4 576 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 P2RY11Q96G91 374 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 ASB16Q96NS5 453 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 UBP1Q9NZI7 540 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 IPO11Q9UI26 975 aaKnown RBP9.58□□□□□ -0.88
SDCBP-212ENST00000523483 CDH7Q9ULB5 785 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 CLEC4EQ9ULY5 219 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 NFU1Q9UMS0 254 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 J3KR12 359 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 RNF103O00237 685 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 STK10O94804 968 aaKnown RBP9.58□□□□□ -0.88
SDCBP-212ENST00000523483 GLDCP23378 1020 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 NR2C2P49116 596 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 VSNL1P62760 191 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 SLC45A4Q5BKX6 768 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 ZNF276Q8N554 614 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 OR52K2Q8NGK3 314 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 WFDC5Q8TCV5 224 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 HTR3CQ8WXA8 447 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 EXOC2Q96KP1 924 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 PRMT1Q99873 361 aaKnown RBP9.58□□□□□ -0.88
SDCBP-212ENST00000523483 RPP25Q9BUL9 199 aaKnown RBP9.58□□□□□ -0.88
SDCBP-212ENST00000523483 RAB17Q9H0T7 212 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 ANKZF1Q9H8Y5 726 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 RAB6BQ9NRW1 208 aa9.58□□□□□ -0.88
SDCBP-212ENST00000523483 COL4A4P53420 1690 aaPredicted RBP9.57□□□□□ -0.88
SDCBP-212ENST00000523483 ANAPC1Q9H1A4 1944 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 VAV1P15498 845 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 GARSP41250 739 aaKnown RBP9.57□□□□□ -0.88
SDCBP-212ENST00000523483 TNNT3P45378 269 aaPredicted RBP9.57□□□□□ -0.88
SDCBP-212ENST00000523483 CARSP49589 748 aaKnown RBP9.57□□□□□ -0.88
SDCBP-212ENST00000523483 MAXP61244 160 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 LMNB2Q03252 620 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 DHX34Q14147 1143 aaKnown RBP9.57□□□□□ -0.88
SDCBP-212ENST00000523483 HP1BP3Q5SSJ5 553 aaPredicted RBP9.57□□□□□ -0.88
SDCBP-212ENST00000523483 MANEALQ5VSG8 457 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 PARM1Q6UWI2 310 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 HTR3DQ70Z44 454 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 FAM71BQ8TC56 605 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 NSMCE1Q8WV22 266 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 FGF14Q92915 247 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 PIH1D1Q9NWS0 290 aaKnown RBP9.57□□□□□ -0.88
SDCBP-212ENST00000523483 GTSE1Q9NYZ3 720 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 CD207Q9UJ71 328 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 E2F8A0AVK6 867 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 CLDN11O75508 207 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 ARSAP15289 507 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 MZF1P28698 734 aaPredicted RBP9.57□□□□□ -0.88
SDCBP-212ENST00000523483 HCAR3P49019 387 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 OASLQ15646 514 aaKnown RBP9.57□□□□□ -0.88
SDCBP-212ENST00000523483 C6orf118Q5T5N4 469 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 IFT20Q8IY31 132 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 ERP44Q9BS26 406 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 ABCB8Q9NUT2 735 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 LMCD1Q9NZU5 365 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 HPCAL4Q9UM19 191 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 NEU3Q9UQ49 428 aa9.57□□□□□ -0.88
SDCBP-212ENST00000523483 TTC24A2A3L6 582 aaPredicted RBP9.57□□□□□ -0.88
SDCBP-212ENST00000523483 ARHGAP42A6NI28 874 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms