RNA–Protein interactions for RNA: ENST00000523390.1

PCDHGB1-201, Transcript of protocadherin gamma subfamily B, 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGB1, Length 4,590 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1-201ENST00000523390 NME5P56597 212 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 TAF10Q12962 218 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 TMCO4Q5TGY1 634 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 LRRC8DQ7L1W4 858 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 MON1AQ86VX9 555 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 UCMAQ8WVF2 138 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 ZNF75CPQ92670 426 aaPredicted RBP13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 PCED1BQ96HM7 432 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 TSPAN18Q96SJ8 248 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 PCYT2Q99447 389 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 TM6SF2Q9BZW4 377 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 SYTL2Q9HCH5 934 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 NHSL1Q5SYE7 1610 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 PPEF2O14830 753 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 FGFR1P11362 822 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 ESRRGP62508 458 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 BTKQ06187 659 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 RASA2Q15283 850 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 MTFR1Q15390 333 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 UNC5AQ6ZN44 842 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 ZNF467Q7Z7K2 595 aaPredicted RBP13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 CACUL1Q86Y37 369 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 PLD5Q8N7P1 536 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 ICA1LQ8NDH6 482 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 DBF4BQ8NFT6 615 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 CPNE1Q99829 537 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 TTPALQ9BTX7 342 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 CDHR5Q9HBB8 845 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 RIC8BQ9NVN3 520 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 PLA2G4CQ9UP65 541 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 PMM2O15305 246 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 PAGE1O75459 146 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 INHAP05111 366 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 CSH1P0DML2 217 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 CSH2P0DML3 217 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 SERPINH1P50454 418 aaKnown RBP13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 SMAD3P84022 425 aaKnown RBP13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 TARBP2Q15633 366 aaKnown RBP13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 TEDDM1Q5T9Z0 273 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 GLT6D1Q7Z4J2 308 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 CCDC126Q96EE4 140 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 SEMA3CQ99985 751 aa13.33□□□□□ -0.28
PCDHGB1-201ENST00000523390 TRIM13O60858 407 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 SNAI1O95863 264 aaPredicted RBP13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 ZNF284Q2VY69 593 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 ZNF792Q3KQV3 632 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 PYROXD2Q8N2H3 581 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 TRIML2Q8N7C3 387 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 CERS2Q96G23 380 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 CENPKQ9BS16 269 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 EMILIN2Q9BXX0 1053 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 IL22Q9GZX6 179 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 PRRC2BQ5JSZ5 2229 aaKnown RBP13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 A0A1W2PQH9 124 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 AGPSO00116 658 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 CLASP2O75122 1294 aaKnown RBP13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 SPATA31D3P0C874 917 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 PABPC1LQ4VXU2 614 aaKnown RBP13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 SPATA31D4Q6ZUB0 917 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 SUGP1Q8IWZ8 645 aaKnown RBP13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 TEKT4Q8WW24 435 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 KLHL5Q96PQ7 755 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 PRDM16Q9HAZ2 1276 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 CHD4Q14839 1912 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 OR6C75A6NL08 312 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 PBLDP30039 288 aaPredicted RBP13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 PPP3CCP48454 512 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 PSEN1P49768 467 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 ATXN1P54253 815 aaKnown RBP13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 GRB14Q14449 540 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 INTS6LQ5JSJ4 861 aaKnown RBP13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 SH3PXD2AQ5TCZ1 1133 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 EXOC3L1Q86VI1 746 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 MYO1HQ8N1T3 1032 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 ATXN2LQ8WWM7 1075 aaKnown RBP13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 EBNA1BP2Q99848 306 aaKnown RBP13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 CORO1BQ9BR76 489 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 ACSS3Q9H6R3 686 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 SUFUQ9UMX1 484 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 ALOX15BO15296 676 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 MFSD11O43934 449 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 DDHD2O94830 711 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 SERPINE1P05121 402 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 TMEM63BQ5T3F8 832 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 SETD3Q86TU7 594 aaPredicted RBP13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 DQX1Q8TE96 717 aaKnown RBP13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 CLEC4CQ8WTT0 213 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 ERLEC1Q96DZ1 483 aa13.32□□□□□ -0.28
PCDHGB1-201ENST00000523390 PLCH1Q4KWH8 1693 aa13.31□□□□□ -0.28
PCDHGB1-201ENST00000523390 BTAF1O14981 1849 aa13.31□□□□□ -0.28
PCDHGB1-201ENST00000523390 C2CD4BA6NLJ0 364 aa13.31□□□□□ -0.28
PCDHGB1-201ENST00000523390 IL10P22301 178 aa13.31□□□□□ -0.28
PCDHGB1-201ENST00000523390 PAX3P23760 479 aa13.31□□□□□ -0.28
PCDHGB1-201ENST00000523390 SLC5A3P53794 718 aa13.31□□□□□ -0.28
PCDHGB1-201ENST00000523390 TRIP10Q15642 601 aa13.31□□□□□ -0.28
PCDHGB1-201ENST00000523390 SOWAHAQ2M3V2 549 aa13.31□□□□□ -0.28
PCDHGB1-201ENST00000523390 RARS2Q5T160 578 aaKnown RBP13.31□□□□□ -0.28
PCDHGB1-201ENST00000523390 SDE2Q6IQ49 451 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms