RNA–Protein interactions for RNA: ENST00000523275.5

CTNNA1-237, Transcript of catenin alpha 1, humanhuman

TSL 5

Gene CTNNA1, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-237ENST00000523275 OR2T34Q8NGX1 318 aa12.13□□□□□ -0.47
CTNNA1-237ENST00000523275 PTPRN2Q92932 1015 aa12.13□□□□□ -0.47
CTNNA1-237ENST00000523275 IGSF8Q969P0 613 aa12.13□□□□□ -0.47
CTNNA1-237ENST00000523275 SYNCQ9H7C4 482 aa12.13□□□□□ -0.47
CTNNA1-237ENST00000523275 SIX2Q9NPC8 291 aa12.13□□□□□ -0.47
CTNNA1-237ENST00000523275 COX16Q9P0S2 106 aa12.13□□□□□ -0.47
CTNNA1-237ENST00000523275 SERGEFQ9UGK8 458 aa12.13□□□□□ -0.47
CTNNA1-237ENST00000523275 A0A1W2PPC4 97 aa12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 SRRM3A6NNA2 597 aaPredicted RBP12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 H0Y8X5 98 aa12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 VILLO15195 856 aa12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 DFNA5O60443 496 aa12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 ADH1BP00325 375 aa12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 ERBB2P04626 1255 aa12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 MZF1P28698 734 aaPredicted RBP12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 NOS2P35228 1153 aa12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 CLCN1P35523 988 aa12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 CTSKP43235 329 aa12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 PSMD8P48556 350 aa12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 STK19P49842 368 aaPredicted RBP12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 CCR5P51681 352 aa12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 C21orf59P57076 290 aa12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 BPIFB4P59827 614 aa12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 SLC6A3Q01959 620 aa12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 NME3Q13232 169 aa12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 AUHQ13825 339 aaKnown RBP12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 ELAVL3Q14576 367 aaKnown RBP12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 MAN2A1Q16706 1144 aa12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 KCNT1Q5JUK3 1230 aa12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 LRSAM1Q6UWE0 723 aa12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 OLFML1Q6UWY5 402 aa12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 LAYNQ6UX15 382 aa12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 CCNI2Q6ZMN8 369 aaPredicted RBP12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 FAM183BPQ6ZVS7 135 aa12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 SND1Q7KZF4 910 aaKnown RBP eCLIP12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 SLC26A9Q7LBE3 791 aa12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 SLC47A2Q86VL8 602 aa12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 CIR1Q86X95 450 aaPredicted RBP12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 FAM114A1Q8IWE2 563 aa12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 FAM71AQ8IYT1 594 aa12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 C1orf131Q8NDD1 294 aaKnown RBP12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 BAHD1Q8TBE0 780 aaPredicted RBP12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 SKA1Q96BD8 255 aa12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 RPRD1AQ96P16 312 aaPredicted RBP12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 FEM1AQ9BSK4 669 aa12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 ACE2Q9BYF1 805 aaPredicted RBP12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 AJAP1Q9UKB5 411 aaPredicted RBP12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 BTBD3Q9Y2F9 522 aa12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 CABIN1Q9Y6J0 2220 aa12.12□□□□□ -0.47
CTNNA1-237ENST00000523275 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP12.11□□□□□ -0.47
CTNNA1-237ENST00000523275 M0QYT0 321 aa12.11□□□□□ -0.47
CTNNA1-237ENST00000523275 PCDHGA12O60330 932 aa12.11□□□□□ -0.47
CTNNA1-237ENST00000523275 PAGE1O75459 146 aa12.11□□□□□ -0.47
CTNNA1-237ENST00000523275 DAB1O75553 588 aa12.11□□□□□ -0.47
CTNNA1-237ENST00000523275 IL1BP01584 269 aa12.11□□□□□ -0.47
CTNNA1-237ENST00000523275 ATXN1LP0C7T5 689 aaKnown RBP12.11□□□□□ -0.47
CTNNA1-237ENST00000523275 NUMBP49757 651 aa12.11□□□□□ -0.47
CTNNA1-237ENST00000523275 VASPP50552 380 aaPredicted RBP12.11□□□□□ -0.47
CTNNA1-237ENST00000523275 ZNF177Q13360 481 aaPredicted RBP12.11□□□□□ -0.47
CTNNA1-237ENST00000523275 KCNJ12Q14500 433 aa12.11□□□□□ -0.47
CTNNA1-237ENST00000523275 VWA3BQ502W6 1294 aa12.11□□□□□ -0.47
CTNNA1-237ENST00000523275 CXorf57Q6NSI4 855 aaKnown RBP12.11□□□□□ -0.47
CTNNA1-237ENST00000523275 ZDHHC17Q8IUH5 632 aa12.11□□□□□ -0.47
CTNNA1-237ENST00000523275 AADATQ8N5Z0 425 aa12.11□□□□□ -0.47
CTNNA1-237ENST00000523275 ZNF397Q8NF99 534 aaPredicted RBP12.11□□□□□ -0.47
CTNNA1-237ENST00000523275 OR14C36Q8NHC7 312 aa12.11□□□□□ -0.47
CTNNA1-237ENST00000523275 FRS2Q8WU20 508 aa12.11□□□□□ -0.47
CTNNA1-237ENST00000523275 ALG14Q96F25 216 aa12.11□□□□□ -0.47
CTNNA1-237ENST00000523275 SPAG5Q96R06 1193 aa12.11□□□□□ -0.47
CTNNA1-237ENST00000523275 NDST4Q9H3R1 872 aa12.11□□□□□ -0.47
CTNNA1-237ENST00000523275 CLSTN2Q9H4D0 955 aa12.11□□□□□ -0.47
CTNNA1-237ENST00000523275 EBF2Q9HAK2 575 aa12.11□□□□□ -0.47
CTNNA1-237ENST00000523275 CHMP5Q9NZZ3 219 aa12.11□□□□□ -0.47
CTNNA1-237ENST00000523275 VANGL2Q9ULK5 521 aa12.11□□□□□ -0.47
CTNNA1-237ENST00000523275 TPX2Q9ULW0 747 aaKnown RBP12.11□□□□□ -0.47
CTNNA1-237ENST00000523275 TBC1D3DA0A087WVF3 549 aa12.1□□□□□ -0.47
CTNNA1-237ENST00000523275 TBC1D3IA0A087WXS9 549 aa12.1□□□□□ -0.47
CTNNA1-237ENST00000523275 TBC1D3EA0A087X179 549 aa12.1□□□□□ -0.47
CTNNA1-237ENST00000523275 TBC1D3KA0A087X1G2 549 aa12.1□□□□□ -0.47
CTNNA1-237ENST00000523275 TBC1D3FA6NER0 549 aaPredicted RBP12.1□□□□□ -0.47
CTNNA1-237ENST00000523275 C10orf142B7Z368 130 aa12.1□□□□□ -0.47
CTNNA1-237ENST00000523275 TBC1D3LB9A6J9 549 aa12.1□□□□□ -0.47
CTNNA1-237ENST00000523275 CLDN11O75508 207 aa12.1□□□□□ -0.47
CTNNA1-237ENST00000523275 CAPNS1P04632 268 aa12.1□□□□□ -0.47
CTNNA1-237ENST00000523275 TBC1D3HP0C7X1 549 aa12.1□□□□□ -0.47
CTNNA1-237ENST00000523275 PNMA6AP0CW24 399 aaPredicted RBP12.1□□□□□ -0.47
CTNNA1-237ENST00000523275 PRKCSHP14314 528 aaPredicted RBP12.1□□□□□ -0.47
CTNNA1-237ENST00000523275 VAV1P15498 845 aa12.1□□□□□ -0.47
CTNNA1-237ENST00000523275 ERCC5P28715 1186 aaPredicted RBP12.1□□□□□ -0.47
CTNNA1-237ENST00000523275 GRK6P43250 576 aa12.1□□□□□ -0.47
CTNNA1-237ENST00000523275 CXCR3P49682 368 aa12.1□□□□□ -0.47
CTNNA1-237ENST00000523275 CCT8P50990 548 aa12.1□□□□□ -0.47
CTNNA1-237ENST00000523275 RNASE9P60153 205 aaKnown RBP12.1□□□□□ -0.47
CTNNA1-237ENST00000523275 CENPCQ03188 943 aa12.1□□□□□ -0.47
CTNNA1-237ENST00000523275 C5orf22Q49AR2 442 aa12.1□□□□□ -0.47
CTNNA1-237ENST00000523275 ACCSLQ4AC99 568 aa12.1□□□□□ -0.47
CTNNA1-237ENST00000523275 PTPN20Q4JDL3 420 aa12.1□□□□□ -0.47
CTNNA1-237ENST00000523275 TBC1D3GQ6DHY5 549 aa12.1□□□□□ -0.47
CTNNA1-237ENST00000523275 TBC1D3CQ6IPX1 549 aa12.1□□□□□ -0.47
CTNNA1-237ENST00000523275 DPY19L2P1Q6NXN4 242 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms