RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 USP30Q70CQ3 517 aa16.72■□□□□ 0.27
CLN8-206ENST00000523237 ZCCHC9Q8N567 271 aaKnown RBP16.72■□□□□ 0.27
CLN8-206ENST00000523237 NEK11Q8NG66 645 aa16.72■□□□□ 0.27
CLN8-206ENST00000523237 SLC20A1Q8WUM9 679 aa16.72■□□□□ 0.27
CLN8-206ENST00000523237 RPL10LQ96L21 214 aaKnown RBP16.72■□□□□ 0.27
CLN8-206ENST00000523237 TBCBQ99426 244 aa16.72■□□□□ 0.27
CLN8-206ENST00000523237 ADAM33Q9BZ11 813 aa16.72■□□□□ 0.27
CLN8-206ENST00000523237 TKTL2Q9H0I9 626 aa16.72■□□□□ 0.27
CLN8-206ENST00000523237 SLCO3A1Q9UIG8 710 aa16.72■□□□□ 0.27
CLN8-206ENST00000523237 CACNA1EQ15878 2313 aa16.71■□□□□ 0.27
CLN8-206ENST00000523237 LRRC10BA6NIK2 292 aa16.71■□□□□ 0.27
CLN8-206ENST00000523237 GIPC1O14908 333 aa16.71■□□□□ 0.27
CLN8-206ENST00000523237 CLDN11O75508 207 aa16.71■□□□□ 0.27
CLN8-206ENST00000523237 ADCY5O95622 1261 aa16.71■□□□□ 0.27
CLN8-206ENST00000523237 SEMA4FO95754 770 aa16.71■□□□□ 0.27
CLN8-206ENST00000523237 CYP1A1P04798 512 aaPredicted RBP16.71■□□□□ 0.27
CLN8-206ENST00000523237 FLT3P36888 993 aa16.71■□□□□ 0.27
CLN8-206ENST00000523237 GGCXP38435 758 aa16.71■□□□□ 0.27
CLN8-206ENST00000523237 UBXN1Q04323 297 aa16.71■□□□□ 0.27
CLN8-206ENST00000523237 C5orf22Q49AR2 442 aa16.71■□□□□ 0.27
CLN8-206ENST00000523237 LRSAM1Q6UWE0 723 aa16.71■□□□□ 0.27
CLN8-206ENST00000523237 ARCQ7LC44 396 aa16.71■□□□□ 0.27
CLN8-206ENST00000523237 GANCQ8TET4 914 aa16.71■□□□□ 0.27
CLN8-206ENST00000523237 SNX19Q92543 992 aa16.71■□□□□ 0.27
CLN8-206ENST00000523237 ZDHHC5Q9C0B5 715 aa16.71■□□□□ 0.27
CLN8-206ENST00000523237 PABPC3Q9H361 631 aaKnown RBP16.71■□□□□ 0.27
CLN8-206ENST00000523237 SLC32A1Q9H598 525 aa16.71■□□□□ 0.27
CLN8-206ENST00000523237 C6orf106Q9H6K1 298 aaPredicted RBP16.71■□□□□ 0.27
CLN8-206ENST00000523237 SGK2Q9HBY8 427 aa16.71■□□□□ 0.27
CLN8-206ENST00000523237 EIF2B4Q9UI10 523 aaKnown RBP16.71■□□□□ 0.27
CLN8-206ENST00000523237 TMEM59LQ9UK28 342 aa16.71■□□□□ 0.27
CLN8-206ENST00000523237 UPK3BL1B0FP48 263 aa16.7■□□□□ 0.26
CLN8-206ENST00000523237 UPK3BL2E5RIL1 263 aa16.7■□□□□ 0.26
CLN8-206ENST00000523237 BCAT2O15382 392 aaPredicted RBP16.7■□□□□ 0.26
CLN8-206ENST00000523237 ZNF18P17022 549 aa16.7■□□□□ 0.26
CLN8-206ENST00000523237 PMLP29590 882 aa16.7■□□□□ 0.26
CLN8-206ENST00000523237 NUMBP49757 651 aa16.7■□□□□ 0.26
CLN8-206ENST00000523237 STK19P49842 368 aaPredicted RBP16.7■□□□□ 0.26
CLN8-206ENST00000523237 IRAK1P51617 712 aa16.7■□□□□ 0.26
CLN8-206ENST00000523237 CDH4P55283 916 aa16.7■□□□□ 0.26
CLN8-206ENST00000523237 FMO1Q01740 532 aa16.7■□□□□ 0.26
CLN8-206ENST00000523237 TYRO3Q06418 890 aa16.7■□□□□ 0.26
CLN8-206ENST00000523237 SEMA3BQ13214 749 aa16.7■□□□□ 0.26
CLN8-206ENST00000523237 CST6Q15828 149 aa16.7■□□□□ 0.26
CLN8-206ENST00000523237 LRRC31Q6UY01 552 aa16.7■□□□□ 0.26
CLN8-206ENST00000523237 TRIM72Q6ZMU5 477 aa16.7■□□□□ 0.26
CLN8-206ENST00000523237 C14orf80Q86SX3 495 aa16.7■□□□□ 0.26
CLN8-206ENST00000523237 MMAAQ8IVH4 418 aaKnown RBP16.7■□□□□ 0.26
CLN8-206ENST00000523237 DEFB124Q8NES8 71 aa16.7■□□□□ 0.26
CLN8-206ENST00000523237 PTPRN2Q92932 1015 aa16.7■□□□□ 0.26
CLN8-206ENST00000523237 CFAP57Q96MR6 1250 aa16.7■□□□□ 0.26
CLN8-206ENST00000523237 FEM1AQ9BSK4 669 aa16.7■□□□□ 0.26
CLN8-206ENST00000523237 NAT10Q9H0A0 1025 aaKnown RBP16.7■□□□□ 0.26
CLN8-206ENST00000523237 DNAAF2Q9NVR5 837 aaKnown RBP16.7■□□□□ 0.26
CLN8-206ENST00000523237 FBXL12Q9NXK8 326 aa16.7■□□□□ 0.26
CLN8-206ENST00000523237 SLC25A13Q9UJS0 675 aa16.7■□□□□ 0.26
CLN8-206ENST00000523237 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.7■□□□□ 0.26
CLN8-206ENST00000523237 DOCK4Q8N1I0 1966 aa16.69■□□□□ 0.26
CLN8-206ENST00000523237 MID1O15344 667 aa16.69■□□□□ 0.26
CLN8-206ENST00000523237 CHRNB2P17787 502 aa16.69■□□□□ 0.26
CLN8-206ENST00000523237 MMP8P22894 467 aa16.69■□□□□ 0.26
CLN8-206ENST00000523237 RDXP35241 583 aaKnown RBP16.69■□□□□ 0.26
CLN8-206ENST00000523237 VASPP50552 380 aaPredicted RBP16.69■□□□□ 0.26
CLN8-206ENST00000523237 ZNF252P-AS1Q0IIN9 211 aa16.69■□□□□ 0.26
CLN8-206ENST00000523237 GRIK2Q13002 908 aa16.69■□□□□ 0.26
CLN8-206ENST00000523237 ELAVL3Q14576 367 aaKnown RBP16.69■□□□□ 0.26
CLN8-206ENST00000523237 NCAPHQ15003 741 aa16.69■□□□□ 0.26
CLN8-206ENST00000523237 TRNP1Q6NT89 227 aa16.69■□□□□ 0.26
CLN8-206ENST00000523237 AOPEPQ8N6M6 819 aa16.69■□□□□ 0.26
CLN8-206ENST00000523237 OR52K2Q8NGK3 314 aa16.69■□□□□ 0.26
CLN8-206ENST00000523237 OR2I1PQ8NGU4 316 aa16.69■□□□□ 0.26
CLN8-206ENST00000523237 ALG14Q96F25 216 aa16.69■□□□□ 0.26
CLN8-206ENST00000523237 C1orf74Q96LT6 269 aa16.69■□□□□ 0.26
CLN8-206ENST00000523237 ERGIC2Q96RQ1 377 aa16.69■□□□□ 0.26
CLN8-206ENST00000523237 FAM129BQ96TA1 746 aa16.69■□□□□ 0.26
CLN8-206ENST00000523237 OMDQ99983 421 aa16.69■□□□□ 0.26
CLN8-206ENST00000523237 ANLNQ9NQW6 1124 aa16.69■□□□□ 0.26
CLN8-206ENST00000523237 METTL5Q9NRN9 209 aaKnown RBP16.69■□□□□ 0.26
CLN8-206ENST00000523237 TMEM63CQ9P1W3 806 aa16.69■□□□□ 0.26
CLN8-206ENST00000523237 VPS28Q9UK41 221 aa16.69■□□□□ 0.26
CLN8-206ENST00000523237 ANGPTL2Q9UKU9 493 aa16.69■□□□□ 0.26
CLN8-206ENST00000523237 TBC1D30Q9Y2I9 924 aa16.69■□□□□ 0.26
CLN8-206ENST00000523237 A0A1W2PP55 124 aa16.68■□□□□ 0.26
CLN8-206ENST00000523237 I6L893 689 aaPredicted RBP16.68■□□□□ 0.26
CLN8-206ENST00000523237 RNASEH2AO75792 299 aaKnown RBP16.68■□□□□ 0.26
CLN8-206ENST00000523237 FSBPO95073 299 aa16.68■□□□□ 0.26
CLN8-206ENST00000523237 ADH1BP00325 375 aa16.68■□□□□ 0.26
CLN8-206ENST00000523237 SLC8A1P32418 973 aa16.68■□□□□ 0.26
CLN8-206ENST00000523237 NSFP46459 744 aaKnown RBP16.68■□□□□ 0.26
CLN8-206ENST00000523237 AFF3P51826 1226 aaKnown RBP16.68■□□□□ 0.26
CLN8-206ENST00000523237 SLC14A1Q13336 389 aa16.68■□□□□ 0.26
CLN8-206ENST00000523237 BNIPLQ7Z465 357 aa16.68■□□□□ 0.26
CLN8-206ENST00000523237 PIP4P1Q86T03 277 aa16.68■□□□□ 0.26
CLN8-206ENST00000523237 SETD3Q86TU7 594 aaPredicted RBP16.68■□□□□ 0.26
CLN8-206ENST00000523237 ZNF683Q8IZ20 524 aa16.68■□□□□ 0.26
CLN8-206ENST00000523237 STK40Q8N2I9 435 aa16.68■□□□□ 0.26
CLN8-206ENST00000523237 C1orf216Q8TAB5 229 aa16.68■□□□□ 0.26
CLN8-206ENST00000523237 SLC30A5Q8TAD4 765 aa16.68■□□□□ 0.26
CLN8-206ENST00000523237 BIRC7Q96CA5 298 aa16.68■□□□□ 0.26
CLN8-206ENST00000523237 CNTNAP3BQ96NU0 1288 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms