RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 MORC3Q14149 939 aa15.93■□□□□ 0.14
MRPS28-209ENST00000522987 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP15.93■□□□□ 0.14
MRPS28-209ENST00000522987 PTPRN2Q92932 1015 aa15.93■□□□□ 0.14
MRPS28-209ENST00000522987 RNF34Q969K3 372 aa15.93■□□□□ 0.14
MRPS28-209ENST00000522987 POPDC2Q9HBU9 364 aa15.93■□□□□ 0.14
MRPS28-209ENST00000522987 OSGEPQ9NPF4 335 aa15.93■□□□□ 0.14
MRPS28-209ENST00000522987 ITPR1Q14643 2758 aa15.93■□□□□ 0.14
MRPS28-209ENST00000522987 COL5A1P20908 1838 aaPredicted RBP15.92■□□□□ 0.14
MRPS28-209ENST00000522987 TBC1D3DA0A087WVF3 549 aa15.92■□□□□ 0.14
MRPS28-209ENST00000522987 TBC1D3IA0A087WXS9 549 aa15.92■□□□□ 0.14
MRPS28-209ENST00000522987 TBC1D3EA0A087X179 549 aa15.92■□□□□ 0.14
MRPS28-209ENST00000522987 TBC1D3KA0A087X1G2 549 aa15.92■□□□□ 0.14
MRPS28-209ENST00000522987 A0A1B0GTQ1 180 aa15.92■□□□□ 0.14
MRPS28-209ENST00000522987 TBC1D3FA6NER0 549 aaPredicted RBP15.92■□□□□ 0.14
MRPS28-209ENST00000522987 TBC1D3LB9A6J9 549 aa15.92■□□□□ 0.14
MRPS28-209ENST00000522987 F5H5T6 163 aa15.92■□□□□ 0.14
MRPS28-209ENST00000522987 VILLO15195 856 aa15.92■□□□□ 0.14
MRPS28-209ENST00000522987 SART1O43290 800 aaKnown RBP15.92■□□□□ 0.14
MRPS28-209ENST00000522987 SRPRAP08240 638 aaKnown RBP15.92■□□□□ 0.14
MRPS28-209ENST00000522987 TBC1D3HP0C7X1 549 aa15.92■□□□□ 0.14
MRPS28-209ENST00000522987 SLC9A1P19634 815 aa15.92■□□□□ 0.14
MRPS28-209ENST00000522987 ABCB4P21439 1286 aa15.92■□□□□ 0.14
MRPS28-209ENST00000522987 RPL34P49207 117 aaKnown RBP15.92■□□□□ 0.14
MRPS28-209ENST00000522987 ADPRHP54922 357 aa15.92■□□□□ 0.14
MRPS28-209ENST00000522987 YWHAZP63104 245 aaKnown RBP15.92■□□□□ 0.14
MRPS28-209ENST00000522987 RACK1P63244 317 aaKnown RBP15.92■□□□□ 0.14
MRPS28-209ENST00000522987 PDCLQ13371 301 aa15.92■□□□□ 0.14
MRPS28-209ENST00000522987 NNTQ13423 1086 aa15.92■□□□□ 0.14
MRPS28-209ENST00000522987 ACCSLQ4AC99 568 aa15.92■□□□□ 0.14
MRPS28-209ENST00000522987 TBC1D3GQ6DHY5 549 aa15.92■□□□□ 0.14
MRPS28-209ENST00000522987 TBC1D3CQ6IPX1 549 aa15.92■□□□□ 0.14
MRPS28-209ENST00000522987 TBC1D3Q8IZP1 549 aaPredicted RBP15.92■□□□□ 0.14
MRPS28-209ENST00000522987 DEFB106AQ8N104 65 aa15.92■□□□□ 0.14
MRPS28-209ENST00000522987 CCAR2Q8N163 923 aaKnown RBP15.92■□□□□ 0.14
MRPS28-209ENST00000522987 EID2Q8N6I1 236 aa15.92■□□□□ 0.14
MRPS28-209ENST00000522987 ATP6V0D2Q8N8Y2 350 aa15.92■□□□□ 0.14
MRPS28-209ENST00000522987 ZNF557Q8N988 423 aaPredicted RBP15.92■□□□□ 0.14
MRPS28-209ENST00000522987 OR52K2Q8NGK3 314 aa15.92■□□□□ 0.14
MRPS28-209ENST00000522987 OR2T34Q8NGX1 318 aa15.92■□□□□ 0.14
MRPS28-209ENST00000522987 CRELD1Q96HD1 420 aa15.92■□□□□ 0.14
MRPS28-209ENST00000522987 SERAC1Q96JX3 654 aa15.92■□□□□ 0.14
MRPS28-209ENST00000522987 BTN2A3PQ96KV6 586 aa15.92■□□□□ 0.14
MRPS28-209ENST00000522987 DDIT4Q9NX09 232 aa15.92■□□□□ 0.14
MRPS28-209ENST00000522987 AJAP1Q9UKB5 411 aaPredicted RBP15.92■□□□□ 0.14
MRPS28-209ENST00000522987 SCML1Q9UN30 329 aa15.92■□□□□ 0.14
MRPS28-209ENST00000522987 GTF3C3Q9Y5Q9 886 aa15.92■□□□□ 0.14
MRPS28-209ENST00000522987 TARSL2A2RTX5 802 aaKnown RBP15.91■□□□□ 0.14
MRPS28-209ENST00000522987 BECN2A8MW95 431 aa15.91■□□□□ 0.14
MRPS28-209ENST00000522987 MED7O43513 233 aa15.91■□□□□ 0.14
MRPS28-209ENST00000522987 PCDHGA12O60330 932 aa15.91■□□□□ 0.14
MRPS28-209ENST00000522987 RTN2O75298 545 aa15.91■□□□□ 0.14
MRPS28-209ENST00000522987 ITGAVP06756 1048 aa15.91■□□□□ 0.14
MRPS28-209ENST00000522987 PNMA6AP0CW24 399 aaPredicted RBP15.91■□□□□ 0.14
MRPS28-209ENST00000522987 C7P10643 843 aa15.91■□□□□ 0.14
MRPS28-209ENST00000522987 CD38P28907 300 aa15.91■□□□□ 0.14
MRPS28-209ENST00000522987 PPP1R2P41236 205 aa15.91■□□□□ 0.14
MRPS28-209ENST00000522987 BNIP3Q12983 259 aa15.91■□□□□ 0.14
MRPS28-209ENST00000522987 NME3Q13232 169 aa15.91■□□□□ 0.14
MRPS28-209ENST00000522987 SHBQ15464 509 aa15.91■□□□□ 0.14
MRPS28-209ENST00000522987 SND1Q7KZF4 910 aaKnown RBP eCLIP15.91■□□□□ 0.14
MRPS28-209ENST00000522987 PDZD3Q86UT5 571 aa15.91■□□□□ 0.14
MRPS28-209ENST00000522987 LRIG1Q96JA1 1093 aa15.91■□□□□ 0.14
MRPS28-209ENST00000522987 CPXM1Q96SM3 734 aa15.91■□□□□ 0.14
MRPS28-209ENST00000522987 ELF4Q99607 663 aaPredicted RBP15.91■□□□□ 0.14
MRPS28-209ENST00000522987 MYOCQ99972 504 aa15.91■□□□□ 0.14
MRPS28-209ENST00000522987 IRX2Q9BZI1 471 aaPredicted RBP15.91■□□□□ 0.14
MRPS28-209ENST00000522987 PLCB1Q9NQ66 1216 aa15.91■□□□□ 0.14
MRPS28-209ENST00000522987 CNTN6Q9UQ52 1028 aa15.91■□□□□ 0.14
MRPS28-209ENST00000522987 CA5BQ9Y2D0 317 aa15.91■□□□□ 0.14
MRPS28-209ENST00000522987 DOCK4Q8N1I0 1966 aa15.91■□□□□ 0.14
MRPS28-209ENST00000522987 ITIH6Q6UXX5 1313 aa15.91■□□□□ 0.14
MRPS28-209ENST00000522987 KCNU1A8MYU2 1149 aa15.9■□□□□ 0.14
MRPS28-209ENST00000522987 ENC1O14682 589 aa15.9■□□□□ 0.14
MRPS28-209ENST00000522987 DKK1O94907 266 aa15.9■□□□□ 0.14
MRPS28-209ENST00000522987 IGLV3-25P01717 112 aa15.9■□□□□ 0.14
MRPS28-209ENST00000522987 GOT1P17174 413 aa15.9■□□□□ 0.14
MRPS28-209ENST00000522987 DRD3P35462 400 aa15.9■□□□□ 0.14
MRPS28-209ENST00000522987 CDK17Q00537 523 aa15.9■□□□□ 0.14
MRPS28-209ENST00000522987 BECN1Q14457 450 aa15.9■□□□□ 0.14
MRPS28-209ENST00000522987 OR6B2Q6IFH4 312 aa15.9■□□□□ 0.14
MRPS28-209ENST00000522987 CXorf57Q6NSI4 855 aaKnown RBP15.9■□□□□ 0.14
MRPS28-209ENST00000522987 FBXL22Q6P050 247 aa15.9■□□□□ 0.14
MRPS28-209ENST00000522987 FAM183BPQ6ZVS7 135 aa15.9■□□□□ 0.14
MRPS28-209ENST00000522987 TMEM110Q86TL2 294 aa15.9■□□□□ 0.14
MRPS28-209ENST00000522987 WDTC1Q8N5D0 677 aa15.9■□□□□ 0.14
MRPS28-209ENST00000522987 C1orf131Q8NDD1 294 aaKnown RBP15.9■□□□□ 0.14
MRPS28-209ENST00000522987 KLK6Q92876 244 aa15.9■□□□□ 0.14
MRPS28-209ENST00000522987 CNDP2Q96KP4 475 aaKnown RBP15.9■□□□□ 0.14
MRPS28-209ENST00000522987 RPRD1AQ96P16 312 aaPredicted RBP15.9■□□□□ 0.14
MRPS28-209ENST00000522987 DCBLD2Q96PD2 775 aa15.9■□□□□ 0.14
MRPS28-209ENST00000522987 PRMT1Q99873 361 aaKnown RBP15.9■□□□□ 0.14
MRPS28-209ENST00000522987 THAP9Q9H5L6 903 aa15.9■□□□□ 0.14
MRPS28-209ENST00000522987 CAAP1Q9H8G2 361 aa15.9■□□□□ 0.14
MRPS28-209ENST00000522987 ADAMTS1Q9UHI8 967 aa15.9■□□□□ 0.14
MRPS28-209ENST00000522987 SARDHQ9UL12 918 aa15.9■□□□□ 0.14
MRPS28-209ENST00000522987 VANGL2Q9ULK5 521 aa15.9■□□□□ 0.14
MRPS28-209ENST00000522987 FZD4Q9ULV1 537 aa15.9■□□□□ 0.14
MRPS28-209ENST00000522987 SNX10Q9Y5X0 201 aa15.9■□□□□ 0.14
MRPS28-209ENST00000522987 A0A1W2PR77 199 aa15.89■□□□□ 0.13
MRPS28-209ENST00000522987 LDOC1O95751 146 aaPredicted RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms