RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 FAM177A1Q8N128 213 aaPredicted RBP7.09□□□□□ -1.27
SDCBP-210ENST00000522843 SREK1Q8WXA9 508 aaKnown RBP7.09□□□□□ -1.27
SDCBP-210ENST00000522843 JAKMIP1Q96N16 626 aaKnown RBP7.09□□□□□ -1.27
SDCBP-210ENST00000522843 PNKPQ96T60 521 aa7.09□□□□□ -1.27
SDCBP-210ENST00000522843 MRPL4Q9BYD3 311 aaKnown RBP7.09□□□□□ -1.27
SDCBP-210ENST00000522843 TM6SF1Q9BZW5 370 aa7.09□□□□□ -1.27
SDCBP-210ENST00000522843 GAREM1Q9H706 876 aa7.09□□□□□ -1.27
SDCBP-210ENST00000522843 TMEM206Q9H813 350 aa7.09□□□□□ -1.27
SDCBP-210ENST00000522843 TRPC7Q9HCX4 862 aa7.09□□□□□ -1.27
SDCBP-210ENST00000522843 TUFT1Q9NNX1 390 aa7.09□□□□□ -1.27
SDCBP-210ENST00000522843 TM7SF3Q9NS93 570 aa7.09□□□□□ -1.27
SDCBP-210ENST00000522843 IMPACTQ9P2X3 320 aa7.09□□□□□ -1.27
SDCBP-210ENST00000522843 SUSD2Q9UGT4 822 aa7.09□□□□□ -1.27
SDCBP-210ENST00000522843 ARHGAP26Q9UNA1 814 aa7.09□□□□□ -1.27
SDCBP-210ENST00000522843 MAGED2Q9UNF1 606 aaPredicted RBP7.09□□□□□ -1.27
SDCBP-210ENST00000522843 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.09□□□□□ -1.27
SDCBP-210ENST00000522843 SPTAN1Q13813 2472 aaKnown RBP7.08□□□□□ -1.28
SDCBP-210ENST00000522843 STK36Q9NRP7 1315 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 TRAV19A0A0A6YYK7 116 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 ARHGEF35A5YM69 484 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 LACTBL1A8MY62 500 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 E9PAM4 449 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 PIRO00625 290 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 TRIM24O15164 1050 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 FAM189A1O60320 539 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 ZNF205O95201 554 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 IMPDH2P12268 514 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 HLA-EP13747 358 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 RPS6KB1P23443 525 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 WASP42768 502 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 PEX3P56589 373 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 SEMG2Q02383 582 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 MAPK7Q13164 816 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 LY6DQ14210 128 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 TAF12Q16514 161 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 HLA-BQ31612 363 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 VWA3BQ502W6 1294 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 COLEC12Q5KU26 742 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 CRTC3Q6UUV7 619 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 APBB1IPQ7Z5R6 666 aaPredicted RBP7.08□□□□□ -1.28
SDCBP-210ENST00000522843 LSRQ86X29 649 aaPredicted RBP7.08□□□□□ -1.28
SDCBP-210ENST00000522843 ZCCHC9Q8N567 271 aaKnown RBP7.08□□□□□ -1.28
SDCBP-210ENST00000522843 SPATA18Q8TC71 538 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 SPPL2BQ8TCT7 592 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 C2orf15Q8WU43 125 aaKnown RBP7.08□□□□□ -1.28
SDCBP-210ENST00000522843 DNASE2BQ8WZ79 361 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 TRMT2BQ96GJ1 504 aaKnown RBP7.08□□□□□ -1.28
SDCBP-210ENST00000522843 IFT74Q96LB3 600 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 DHRS1Q96LJ7 313 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 ACOX2Q99424 681 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 NAP1L4Q99733 375 aaKnown RBP7.08□□□□□ -1.28
SDCBP-210ENST00000522843 TCHPQ9BT92 498 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 PI4K2AQ9BTU6 479 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 ZDHHC5Q9C0B5 715 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 FAM124BQ9H5Z6 455 aaPredicted RBP7.08□□□□□ -1.28
SDCBP-210ENST00000522843 ARHGEF4Q9NR80 690 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 UBQLN1Q9UMX0 589 aaKnown RBP7.08□□□□□ -1.28
SDCBP-210ENST00000522843 SNX14Q9Y5W7 946 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 FLNCQ14315 2725 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 NOTCH2Q04721 2471 aa7.08□□□□□ -1.28
SDCBP-210ENST00000522843 MYLKQ15746 1914 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 TMEM131Q92545 1883 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 A0A1B0GTW7 788 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 CCDC169A6NNP5 214 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 BTBD18B2RXH4 712 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 LEFTY2O00292 366 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 FLRT2O43155 660 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 APODP05090 189 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 ADRB2P07550 413 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 MSL3P1P0C860 447 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 CSH1P0DML2 217 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 CSH2P0DML3 217 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 ODC1P11926 461 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 CYP2F1P24903 491 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 RPA1P27694 616 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 GRIA2P42262 883 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 TNFRSF4P43489 277 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 PMS1P54277 932 aaKnown RBP7.07□□□□□ -1.28
SDCBP-210ENST00000522843 CXADRP78310 365 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 ATP2C1P98194 919 aaPredicted RBP7.07□□□□□ -1.28
SDCBP-210ENST00000522843 MCL1Q07820 350 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 BECN1Q14457 450 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 NOLC1Q14978 699 aaKnown RBP eCLIP7.07□□□□□ -1.28
SDCBP-210ENST00000522843 CCDC157Q569K6 752 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 SPATA1Q5VX52 437 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 C9orf57Q5W0N0 161 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 WSCD1Q658N2 575 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 BLOC1S2Q6QNY1 142 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 LIPIQ6XZB0 460 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 UNC5AQ6ZN44 842 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 CCDC81Q6ZN84 652 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 TMPRSS12Q86WS5 348 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 TAB3Q8N5C8 712 aaPredicted RBP7.07□□□□□ -1.28
SDCBP-210ENST00000522843 RBBP8NLQ8NC74 664 aaPredicted RBP7.07□□□□□ -1.28
SDCBP-210ENST00000522843 TMEM52Q8NDY8 209 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 FNIP1Q8TF40 1166 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 KIFAP3Q92845 792 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 WBP1Q96G27 269 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 JMJD8Q96S16 334 aa7.07□□□□□ -1.28
SDCBP-210ENST00000522843 PKMYT1Q99640 499 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms