RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 TBC1D3EA0A087X179 549 aa5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 TBC1D3KA0A087X1G2 549 aa5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 GOLGA6L10A0A0M3HER8 536 aa5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 A0A1W2PPH5 198 aa5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 TBC1D3BA6NDS4 549 aa5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 TBC1D3FA6NER0 549 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 TBC1D3LB9A6J9 549 aa5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 CES2O00748 559 aa5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 RTN3O95197 1032 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 ALDOAP04075 364 aaKnown RBP5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 NPSP0C0P6 89 aa5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 TBC1D3HP0C7X1 549 aa5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 CDK4P11802 303 aa5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 PRPH2P23942 346 aa5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 B4GALNT1Q00973 533 aa5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 CDK18Q07002 472 aa5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 TBL3Q12788 808 aaKnown RBP5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 CBFBQ13951 182 aa5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 ERV3-1Q14264 604 aa5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 PRAMEF17Q5VTA0 474 aa5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 SPATA1Q5VX52 437 aa5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 TBC1D3GQ6DHY5 549 aa5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 TBC1D3CQ6IPX1 549 aa5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 SLC39A5Q6ZMH5 540 aa5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 ZNF66Q6ZN08 573 aa5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 P3H2Q8IVL5 708 aa5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 SCN4BQ8IWT1 228 aa5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 TBC1D3Q8IZP1 549 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 ABHD11Q8NFV4 315 aa5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 ZNF845Q96IR2 970 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 NR1H4Q96RI1 486 aaPredicted RBP5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 USP44Q9H0E7 712 aa5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 AASSQ9UDR5 926 aa5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 NAALADL1Q9UQQ1 740 aa5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 B3GNT3Q9Y2A9 372 aa5.16□□□□□ -1.58
HMGB1P1-201ENST00000522557 TCRBV5S1A1TA0A578 114 aa5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 A6NCN8 305 aa5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 GAGE10A6NGK3 116 aa5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 TNFSF14O43557 240 aa5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 TULP3O75386 442 aa5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 METTL18O95568 372 aa5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 MLYCDO95822 493 aa5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 LATS1O95835 1130 aa5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 RFPL3SP0C7P2 107 aa5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 TNNT1P13805 278 aa5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 MPGP29372 298 aa5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 STAT6P42226 847 aa5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 SLC37A1P57057 533 aa5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 WDR5P61964 334 aaKnown RBP5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 HOXA4Q00056 320 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 SLC10A2Q12908 348 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 TBC1D25Q3MII6 688 aa5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 L1TD1Q5T7N2 865 aaKnown RBP5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 TMEM88Q6PEY1 159 aa5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 TMTC3Q6ZXV5 915 aa5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 ZNF804AQ7Z570 1209 aa5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 TICAM2Q86XR7 235 aa5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 ARMC8Q8IUR7 673 aa5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 ENDOVQ8N8Q3 282 aaKnown RBP5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 NFKBIDQ8NI38 313 aa5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 RNFT2Q96EX2 444 aa5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 RBM17Q96I25 401 aaKnown RBP5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 MMS19Q96T76 1030 aa5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 SLC29A3Q9BZD2 475 aa5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 LMAN2LQ9H0V9 348 aa5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 TXNRD2Q9NNW7 524 aa5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 OLA1Q9NTK5 396 aaKnown RBP5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 THAP1Q9NVV9 213 aa5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 BEX4Q9NWD9 120 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 FLRT1Q9NZU1 646 aa5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 FBXO2Q9UK22 296 aaPredicted RBP5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 ARHGAP26Q9UNA1 814 aa5.15□□□□□ -1.59
HMGB1P1-201ENST00000522557 WDR91A4D1P6 747 aa5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 SH2D7A6NKC9 451 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 INO80B-WBP1J3KQ70 363 aa5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 PEX12O00623 359 aa5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 SPTLC2O15270 562 aa5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 CLEC3BP05452 202 aa5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 CENPBP07199 599 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 CYP2D6P10635 497 aa5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 CPA1P15085 419 aa5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 HOXD12P35452 270 aa5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 RGS2P41220 211 aa5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 MTNR1AP48039 350 aa5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 PCP4P48539 62 aa5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 AGTR2P50052 363 aa5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 RNASELQ05823 741 aaKnown RBP5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 PRKG2Q13237 762 aa5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 LARS2Q15031 903 aaKnown RBP5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 SRSF7Q16629 238 aaKnown RBP eCLIP5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 ZNF766Q5HY98 468 aa5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 SNX30Q5VWJ9 437 aa5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 DENND2CQ68D51 928 aa5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 SYNE3Q6ZMZ3 975 aa5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 CHSY1Q86X52 802 aa5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 RFX6Q8HWS3 928 aa5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 MAFAQ8NHW3 353 aaPredicted RBP5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 AKAP1Q92667 903 aaKnown RBP eCLIP5.14□□□□□ -1.59
HMGB1P1-201ENST00000522557 APOPT1Q96IL0 206 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms