RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 ATP5BP06576 529 aaKnown RBP18.37■□□□□ 0.53
CLK4-211ENST00000522556 GZMAP12544 262 aa18.37■□□□□ 0.53
CLK4-211ENST00000522556 CDH4P55283 916 aa18.37■□□□□ 0.53
CLK4-211ENST00000522556 RNF219Q5W0B1 726 aaPredicted RBP18.37■□□□□ 0.53
CLK4-211ENST00000522556 SPECC1LQ69YQ0 1117 aa18.37■□□□□ 0.53
CLK4-211ENST00000522556 DCUN1D2Q6PH85 259 aa18.37■□□□□ 0.53
CLK4-211ENST00000522556 TMPRSS6Q8IU80 811 aa18.37■□□□□ 0.53
CLK4-211ENST00000522556 TMEFF1Q8IYR6 380 aa18.37■□□□□ 0.53
CLK4-211ENST00000522556 PEBP4Q96S96 227 aa18.37■□□□□ 0.53
CLK4-211ENST00000522556 FEM1AQ9BSK4 669 aa18.37■□□□□ 0.53
CLK4-211ENST00000522556 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP18.37■□□□□ 0.53
CLK4-211ENST00000522556 ISCUQ9H1K1 167 aa18.37■□□□□ 0.53
CLK4-211ENST00000522556 NDFIP2Q9NV92 336 aa18.37■□□□□ 0.53
CLK4-211ENST00000522556 GPATCH2LQ9NWQ4 482 aa18.37■□□□□ 0.53
CLK4-211ENST00000522556 NENFQ9UMX5 172 aa18.37■□□□□ 0.53
CLK4-211ENST00000522556 PLA2G4CQ9UP65 541 aa18.37■□□□□ 0.53
CLK4-211ENST00000522556 TBC1D30Q9Y2I9 924 aa18.37■□□□□ 0.53
CLK4-211ENST00000522556 ZNF292O60281 2723 aa18.36■□□□□ 0.53
CLK4-211ENST00000522556 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.36■□□□□ 0.53
CLK4-211ENST00000522556 NPC1O15118 1278 aa18.36■□□□□ 0.53
CLK4-211ENST00000522556 CBFA2T2O43439 604 aa18.36■□□□□ 0.53
CLK4-211ENST00000522556 CLDN11O75508 207 aa18.36■□□□□ 0.53
CLK4-211ENST00000522556 EPN2O95208 641 aa18.36■□□□□ 0.53
CLK4-211ENST00000522556 RETP07949 1114 aa18.36■□□□□ 0.53
CLK4-211ENST00000522556 GLDCP23378 1020 aa18.36■□□□□ 0.53
CLK4-211ENST00000522556 PTGER3P43115 390 aa18.36■□□□□ 0.53
CLK4-211ENST00000522556 ZNF177Q13360 481 aaPredicted RBP18.36■□□□□ 0.53
CLK4-211ENST00000522556 TCEAL6Q6IPX3 200 aa18.36■□□□□ 0.53
CLK4-211ENST00000522556 SCYL2Q6P3W7 929 aa18.36■□□□□ 0.53
CLK4-211ENST00000522556 TMC6Q7Z403 805 aa18.36■□□□□ 0.53
CLK4-211ENST00000522556 CCDC117Q8IWD4 279 aaPredicted RBP18.36■□□□□ 0.53
CLK4-211ENST00000522556 ZNF557Q8N988 423 aaPredicted RBP18.36■□□□□ 0.53
CLK4-211ENST00000522556 OR7D4Q8NG98 312 aa18.36■□□□□ 0.53
CLK4-211ENST00000522556 OR2T3Q8NH03 318 aa18.36■□□□□ 0.53
CLK4-211ENST00000522556 CHD5Q8TDI0 1954 aa18.36■□□□□ 0.53
CLK4-211ENST00000522556 TCEAL3Q969E4 200 aa18.36■□□□□ 0.53
CLK4-211ENST00000522556 ARHGEF26Q96DR7 871 aa18.36■□□□□ 0.53
CLK4-211ENST00000522556 VCPIP1Q96JH7 1222 aa18.36■□□□□ 0.53
CLK4-211ENST00000522556 C1orf74Q96LT6 269 aa18.36■□□□□ 0.53
CLK4-211ENST00000522556 ATXN2Q99700 1313 aaKnown RBP18.36■□□□□ 0.53
CLK4-211ENST00000522556 CNPY3Q9BT09 278 aa18.36■□□□□ 0.53
CLK4-211ENST00000522556 PRDM16Q9HAZ2 1276 aa18.36■□□□□ 0.53
CLK4-211ENST00000522556 PAXBP1Q9Y5B6 917 aa18.36■□□□□ 0.53
CLK4-211ENST00000522556 TMEM191CA6NGB0 347 aa18.35■□□□□ 0.53
CLK4-211ENST00000522556 SIN3BO75182 1162 aa18.35■□□□□ 0.53
CLK4-211ENST00000522556 LRIG2O94898 1065 aa18.35■□□□□ 0.53
CLK4-211ENST00000522556 ASLP04424 464 aa18.35■□□□□ 0.53
CLK4-211ENST00000522556 TPM3P06753 285 aa18.35■□□□□ 0.53
CLK4-211ENST00000522556 RHOCP08134 193 aa18.35■□□□□ 0.53
CLK4-211ENST00000522556 PSMA2P25787 234 aa18.35■□□□□ 0.53
CLK4-211ENST00000522556 EIF4A3P38919 411 aaKnown RBP18.35■□□□□ 0.53
CLK4-211ENST00000522556 PLK1P53350 603 aa18.35■□□□□ 0.53
CLK4-211ENST00000522556 ADKP55263 362 aaKnown RBP18.35■□□□□ 0.53
CLK4-211ENST00000522556 ECT2LQ008S8 904 aa18.35■□□□□ 0.53
CLK4-211ENST00000522556 MTA1Q13330 715 aa18.35■□□□□ 0.53
CLK4-211ENST00000522556 SF3A2Q15428 464 aaKnown RBP18.35■□□□□ 0.53
CLK4-211ENST00000522556 CYP4V2Q6ZWL3 525 aaPredicted RBP18.35■□□□□ 0.53
CLK4-211ENST00000522556 DRC7Q8IY82 874 aa18.35■□□□□ 0.53
CLK4-211ENST00000522556 NTAN1Q96AB6 310 aa18.35■□□□□ 0.53
CLK4-211ENST00000522556 SPACA7Q96KW9 195 aa18.35■□□□□ 0.53
CLK4-211ENST00000522556 THAP2Q9H0W7 228 aa18.35■□□□□ 0.53
CLK4-211ENST00000522556 RXFP3Q9NSD7 469 aa18.35■□□□□ 0.53
CLK4-211ENST00000522556 PARVAQ9NVD7 372 aa18.35■□□□□ 0.53
CLK4-211ENST00000522556 USP36Q9P275 1121 aaKnown RBP18.35■□□□□ 0.53
CLK4-211ENST00000522556 OR12D3Q9UGF7 316 aa18.35■□□□□ 0.53
CLK4-211ENST00000522556 USP18Q9UMW8 372 aa18.35■□□□□ 0.53
CLK4-211ENST00000522556 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP18.35■□□□□ 0.53
CLK4-211ENST00000522556 ACTL7AQ9Y615 435 aa18.35■□□□□ 0.53
CLK4-211ENST00000522556 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.35■□□□□ 0.53
CLK4-211ENST00000522556 DMXL1Q9Y485 3027 aa18.34■□□□□ 0.53
CLK4-211ENST00000522556 MOCS3O95396 460 aa18.34■□□□□ 0.53
CLK4-211ENST00000522556 MT-CO1P00395 513 aa18.34■□□□□ 0.53
CLK4-211ENST00000522556 TCF4P15884 667 aa18.34■□□□□ 0.53
CLK4-211ENST00000522556 HNRNPH3P31942 346 aaKnown RBP18.34■□□□□ 0.53
CLK4-211ENST00000522556 MPLP40238 635 aa18.34■□□□□ 0.53
CLK4-211ENST00000522556 DHPSP49366 369 aaPredicted RBP18.34■□□□□ 0.53
CLK4-211ENST00000522556 TPMTP51580 245 aa18.34■□□□□ 0.53
CLK4-211ENST00000522556 RPS14P62263 151 aaKnown RBP18.34■□□□□ 0.53
CLK4-211ENST00000522556 GFPT1Q06210 699 aaPredicted RBP18.34■□□□□ 0.53
CLK4-211ENST00000522556 SCAPQ12770 1279 aa18.34■□□□□ 0.53
CLK4-211ENST00000522556 ELF2Q15723 593 aa18.34■□□□□ 0.53
CLK4-211ENST00000522556 CA9Q16790 459 aa18.34■□□□□ 0.53
CLK4-211ENST00000522556 HNRNPA1L2Q32P51 320 aaKnown RBP18.34■□□□□ 0.53
CLK4-211ENST00000522556 C9orf64Q5T6V5 341 aa18.34■□□□□ 0.53
CLK4-211ENST00000522556 LRRC31Q6UY01 552 aa18.34■□□□□ 0.53
CLK4-211ENST00000522556 LINGO4Q6UY18 593 aa18.34■□□□□ 0.53
CLK4-211ENST00000522556 NLRP14Q86W24 1093 aa18.34■□□□□ 0.53
CLK4-211ENST00000522556 SLC41A1Q8IVJ1 513 aa18.34■□□□□ 0.53
CLK4-211ENST00000522556 IQCDQ96DY2 449 aa18.34■□□□□ 0.53
CLK4-211ENST00000522556 SIPA1Q96FS4 1042 aa18.34■□□□□ 0.53
CLK4-211ENST00000522556 BTBD6Q96KE9 485 aa18.34■□□□□ 0.53
CLK4-211ENST00000522556 DNAJC7Q99615 494 aa18.34■□□□□ 0.53
CLK4-211ENST00000522556 PACSIN1Q9BY11 444 aa18.34■□□□□ 0.53
CLK4-211ENST00000522556 ZYG11BQ9C0D3 744 aa18.34■□□□□ 0.53
CLK4-211ENST00000522556 MUC3BQ9H195 1237 aa18.34■□□□□ 0.53
CLK4-211ENST00000522556 SEMA4GQ9NTN9 838 aa18.34■□□□□ 0.53
CLK4-211ENST00000522556 VPS28Q9UK41 221 aa18.34■□□□□ 0.53
CLK4-211ENST00000522556 FZD10Q9ULW2 581 aa18.34■□□□□ 0.53
CLK4-211ENST00000522556 PATE3B3GLJ2 98 aa18.33■□□□□ 0.52
CLK4-211ENST00000522556 K7ERQ8 282 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms