RNA–Protein interactions for RNA: ENST00000522414.1

PVT1-213, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 654 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-213ENST00000522414 GABRG3Q99928 467 aa8.38□□□□□ -1.07
PVT1-213ENST00000522414 NUSAP1Q9BXS6 441 aaKnown RBP8.38□□□□□ -1.07
PVT1-213ENST00000522414 ULBP1Q9BZM6 244 aa8.38□□□□□ -1.07
PVT1-213ENST00000522414 MKRN2Q9H000 416 aaKnown RBP8.38□□□□□ -1.07
PVT1-213ENST00000522414 MARCH2Q9P0N8 246 aa8.38□□□□□ -1.07
PVT1-213ENST00000522414 SFMBT1Q9UHJ3 866 aa8.38□□□□□ -1.07
PVT1-213ENST00000522414 EVLQ9UI08 416 aaPredicted RBP8.38□□□□□ -1.07
PVT1-213ENST00000522414 WASF3Q9UPY6 502 aa8.38□□□□□ -1.07
PVT1-213ENST00000522414 ATP6V1DQ9Y5K8 247 aa8.38□□□□□ -1.07
PVT1-213ENST00000522414 CELSR3Q9NYQ7 3312 aa8.38□□□□□ -1.07
PVT1-213ENST00000522414 ZFYVE26Q68DK2 2539 aa8.38□□□□□ -1.07
PVT1-213ENST00000522414 SPAARA0A1B0GVQ0 90 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 YJEFN3A6XGL0 299 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 KCNJ18B7U540 433 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 E7ENQ6 273 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 SART1O43290 800 aaKnown RBP8.37□□□□□ -1.07
PVT1-213ENST00000522414 AP5Z1O43299 807 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 ZBED1O96006 694 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 PENKP01210 267 aaPredicted RBP8.37□□□□□ -1.07
PVT1-213ENST00000522414 F13BP05160 661 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 CD19P15391 556 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 CSRP1P21291 193 aaKnown RBP8.37□□□□□ -1.07
PVT1-213ENST00000522414 CHKAP35790 457 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 IL12RB1P42701 662 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 FAM193AP78312 1265 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 FKBP3Q00688 224 aaKnown RBP8.37□□□□□ -1.07
PVT1-213ENST00000522414 GFPT1Q06210 699 aaPredicted RBP8.37□□□□□ -1.07
PVT1-213ENST00000522414 ZNF252P-AS1Q0IIN9 211 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 SEMA3BQ13214 749 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 CUL2Q13617 745 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 DUOXA1Q1HG43 343 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 FUT11Q495W5 492 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 ZNF658Q5TYW1 1059 aaPredicted RBP8.37□□□□□ -1.07
PVT1-213ENST00000522414 BSPRYQ5W0U4 402 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 ANKRD34AQ69YU3 496 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 KIAA1324Q6UXG2 1013 aaKnown RBP8.37□□□□□ -1.07
PVT1-213ENST00000522414 SLC36A4Q6YBV0 504 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 BHLHA9Q7RTU4 235 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 TADA2BQ86TJ2 420 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 TMPRSS6Q8IU80 811 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 FMNL3Q8IVF7 1028 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 POU5F2Q8N7G0 328 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 ENGASEQ8NFI3 743 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 DDI1Q8WTU0 396 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 TFAP2BQ92481 460 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 TOE1Q96GM8 510 aaKnown RBP8.37□□□□□ -1.07
PVT1-213ENST00000522414 ZNF419Q96HQ0 510 aaPredicted RBP8.37□□□□□ -1.07
PVT1-213ENST00000522414 FAXDC2Q96IV6 333 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 PIWIL1Q96J94 861 aaKnown RBP8.37□□□□□ -1.07
PVT1-213ENST00000522414 HSPA12BQ96MM6 686 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 CAMK1GQ96NX5 476 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 DNAI2Q9GZS0 605 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 ADAM19Q9H013 955 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 FAM124BQ9H5Z6 455 aaPredicted RBP8.37□□□□□ -1.07
PVT1-213ENST00000522414 PRDM16Q9HAZ2 1276 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 CAPN10Q9HC96 672 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 ELOVL2Q9NXB9 296 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 TSPAN16Q9UKR8 245 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 ZNF510Q9Y2H8 683 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 SLC27A6Q9Y2P4 619 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 COQ4Q9Y3A0 265 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 FREM2Q5SZK8 3169 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 ADAMTS9Q9P2N4 1935 aa8.37□□□□□ -1.07
PVT1-213ENST00000522414 ANKRD11Q6UB99 2663 aaPredicted RBP8.36□□□□□ -1.07
PVT1-213ENST00000522414 GOLGA6L7A0A1B0GV03 622 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 GOLGA6L4A6NEF3 574 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 GFRA2O00451 464 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 STX10O60499 249 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 NDUFS2O75306 463 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 ZNF217O75362 1048 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 SERPINF2P08697 491 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 HLA-EP13747 358 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 LCP1P13796 627 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 RGS7P49802 495 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 ATXN3P54252 364 aaPredicted RBP8.36□□□□□ -1.07
PVT1-213ENST00000522414 SLC8A3P57103 927 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 ADIGQ0VDE8 80 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 COBLL1Q53SF7 1204 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 SGO2Q562F6 1265 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 PEAR1Q5VY43 1037 aaPredicted RBP8.36□□□□□ -1.07
PVT1-213ENST00000522414 PIP4P1Q86T03 277 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 CACUL1Q86Y37 369 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 ZC3H3Q8IXZ2 948 aaKnown RBP8.36□□□□□ -1.07
PVT1-213ENST00000522414 ARHGAP18Q8N392 663 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 TTC39CQ8N584 583 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 CEP76Q8TAP6 659 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 SPATA20Q8TB22 786 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 RNF139Q8WU17 664 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 CYB5D2Q8WUJ1 264 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 KAT5Q92993 513 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 SLC35C1Q96A29 364 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 IPO9Q96P70 1041 aaKnown RBP8.36□□□□□ -1.07
PVT1-213ENST00000522414 CDK5RAP1Q96SZ6 601 aaKnown RBP8.36□□□□□ -1.07
PVT1-213ENST00000522414 TSG101Q99816 390 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 ZSWIM1Q9BR11 485 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 SCNM1Q9BWG6 230 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 GPR174Q9BXC1 333 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 DCLK3Q9C098 648 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 CIPCQ9C0C6 399 aa8.36□□□□□ -1.07
PVT1-213ENST00000522414 ZMYND15Q9H091 742 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms