RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 NEUROG2Q9H2A3 272 aa21.33■■□□□ 1.01
SDCBP-209ENST00000522243 WDCPQ9H6R7 721 aa21.33■■□□□ 1.01
SDCBP-209ENST00000522243 GAREM1Q9H706 876 aa21.33■■□□□ 1.01
SDCBP-209ENST00000522243 STAP1Q9ULZ2 295 aa21.33■■□□□ 1.01
SDCBP-209ENST00000522243 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP21.32■■□□□ 1
SDCBP-209ENST00000522243 F8VZ95 297 aa21.32■■□□□ 1
SDCBP-209ENST00000522243 GOLGA8SH3BPF8 625 aa21.32■■□□□ 1
SDCBP-209ENST00000522243 ADCY5O95622 1261 aa21.32■■□□□ 1
SDCBP-209ENST00000522243 SLC8A1P32418 973 aa21.32■■□□□ 1
SDCBP-209ENST00000522243 NNMTP40261 264 aa21.32■■□□□ 1
SDCBP-209ENST00000522243 GABRB2P47870 512 aa21.32■■□□□ 1
SDCBP-209ENST00000522243 ZNF177Q13360 481 aaPredicted RBP21.32■■□□□ 1
SDCBP-209ENST00000522243 LAYNQ6UX15 382 aa21.32■■□□□ 1
SDCBP-209ENST00000522243 USP30Q70CQ3 517 aa21.32■■□□□ 1
SDCBP-209ENST00000522243 XYLT1Q86Y38 959 aa21.32■■□□□ 1
SDCBP-209ENST00000522243 CPA5Q8WXQ8 436 aa21.32■■□□□ 1
SDCBP-209ENST00000522243 TBCBQ99426 244 aa21.32■■□□□ 1
SDCBP-209ENST00000522243 OMDQ99983 421 aa21.32■■□□□ 1
SDCBP-209ENST00000522243 TKTL2Q9H0I9 626 aa21.32■■□□□ 1
SDCBP-209ENST00000522243 GANQ9H2C0 597 aa21.32■■□□□ 1
SDCBP-209ENST00000522243 TMPRSS4Q9NRS4 437 aa21.32■■□□□ 1
SDCBP-209ENST00000522243 SCML1Q9UN30 329 aa21.32■■□□□ 1
SDCBP-209ENST00000522243 WASF3Q9UPY6 502 aa21.32■■□□□ 1
SDCBP-209ENST00000522243 PLXNA2O75051 1894 aa21.32■■□□□ 1
SDCBP-209ENST00000522243 CACNA1EQ15878 2313 aa21.31■■□□□ 1
SDCBP-209ENST00000522243 I6L893 689 aaPredicted RBP21.31■■□□□ 1
SDCBP-209ENST00000522243 RNASEH2AO75792 299 aaKnown RBP21.31■■□□□ 1
SDCBP-209ENST00000522243 KRT37O76014 449 aa21.31■■□□□ 1
SDCBP-209ENST00000522243 GFPT2O94808 682 aa21.31■■□□□ 1
SDCBP-209ENST00000522243 PLK1P53350 603 aa21.31■■□□□ 1
SDCBP-209ENST00000522243 GALCP54803 685 aa21.31■■□□□ 1
SDCBP-209ENST00000522243 DEUP1Q05D60 604 aa21.31■■□□□ 1
SDCBP-209ENST00000522243 SULT2A1Q06520 285 aa21.31■■□□□ 1
SDCBP-209ENST00000522243 SLC14A1Q13336 389 aa21.31■■□□□ 1
SDCBP-209ENST00000522243 HLA-BQ31612 363 aa21.31■■□□□ 1
SDCBP-209ENST00000522243 CDKAL1Q5VV42 579 aa21.31■■□□□ 1
SDCBP-209ENST00000522243 NAA35Q5VZE5 725 aa21.31■■□□□ 1
SDCBP-209ENST00000522243 KIAA0895LQ68EN5 471 aa21.31■■□□□ 1
SDCBP-209ENST00000522243 EPS8L1Q8TE68 723 aa21.31■■□□□ 1
SDCBP-209ENST00000522243 ALG14Q96F25 216 aa21.31■■□□□ 1
SDCBP-209ENST00000522243 SCNM1Q9BWG6 230 aa21.31■■□□□ 1
SDCBP-209ENST00000522243 TM9SF3Q9HD45 589 aa21.31■■□□□ 1
SDCBP-209ENST00000522243 NLRC4Q9NPP4 1024 aa21.31■■□□□ 1
SDCBP-209ENST00000522243 FANCLQ9NW38 375 aa21.31■■□□□ 1
SDCBP-209ENST00000522243 ARHGEF38Q9NXL2 777 aa21.31■■□□□ 1
SDCBP-209ENST00000522243 RRN3Q9NYV6 651 aa21.31■■□□□ 1
SDCBP-209ENST00000522243 FNDC3AQ9Y2H6 1198 aaKnown RBP21.31■■□□□ 1
SDCBP-209ENST00000522243 C1QTNF9BB2RNN3 333 aa21.3■■□□□ 1
SDCBP-209ENST00000522243 HYAL3O43820 417 aaPredicted RBP21.3■■□□□ 1
SDCBP-209ENST00000522243 CNTN5O94779 1100 aa21.3■■□□□ 1
SDCBP-209ENST00000522243 CER1O95813 267 aa21.3■■□□□ 1
SDCBP-209ENST00000522243 IL1BP01584 269 aa21.3■■□□□ 1
SDCBP-209ENST00000522243 IGHV4-34P06331 123 aa21.3■■□□□ 1
SDCBP-209ENST00000522243 C1QTNF9P0C862 333 aa21.3■■□□□ 1
SDCBP-209ENST00000522243 CD27P26842 260 aa21.3■■□□□ 1
SDCBP-209ENST00000522243 FLT3P36888 993 aa21.3■■□□□ 1
SDCBP-209ENST00000522243 CXCR3P49682 368 aa21.3■■□□□ 1
SDCBP-209ENST00000522243 AFF3P51826 1226 aaKnown RBP21.3■■□□□ 1
SDCBP-209ENST00000522243 OXCT1P55809 520 aa21.3■■□□□ 1
SDCBP-209ENST00000522243 POLR2FP61218 127 aaKnown RBP21.3■■□□□ 1
SDCBP-209ENST00000522243 KIF19Q2TAC6 998 aa21.3■■□□□ 1
SDCBP-209ENST00000522243 ACCSLQ4AC99 568 aa21.3■■□□□ 1
SDCBP-209ENST00000522243 TRNP1Q6NT89 227 aa21.3■■□□□ 1
SDCBP-209ENST00000522243 NCEH1Q6PIU2 408 aa21.3■■□□□ 1
SDCBP-209ENST00000522243 RBM43Q6ZSC3 357 aaKnown RBP21.3■■□□□ 1
SDCBP-209ENST00000522243 SND1Q7KZF4 910 aaKnown RBP eCLIP21.3■■□□□ 1
SDCBP-209ENST00000522243 NAXDQ8IW45 347 aa21.3■■□□□ 1
SDCBP-209ENST00000522243 AADATQ8N5Z0 425 aa21.3■■□□□ 1
SDCBP-209ENST00000522243 SLC20A1Q8WUM9 679 aa21.3■■□□□ 1
SDCBP-209ENST00000522243 GBP4Q96PP9 640 aa21.3■■□□□ 1
SDCBP-209ENST00000522243 TM7SF3Q9NS93 570 aa21.3■■□□□ 1
SDCBP-209ENST00000522243 FAM207AQ9NSI2 230 aaPredicted RBP21.3■■□□□ 1
SDCBP-209ENST00000522243 SLC25A13Q9UJS0 675 aa21.3■■□□□ 1
SDCBP-209ENST00000522243 PCDHB9Q9Y5E1 797 aa21.3■■□□□ 1
SDCBP-209ENST00000522243 SNX11Q9Y5W9 270 aa21.3■■□□□ 1
SDCBP-209ENST00000522243 KCNK3O14649 394 aa21.29■■□□□ 1
SDCBP-209ENST00000522243 EPHB6O15197 1021 aa21.29■■□□□ 1
SDCBP-209ENST00000522243 ZNF18P17022 549 aa21.29■■□□□ 1
SDCBP-209ENST00000522243 NOMO3P69849 1222 aa21.29■■□□□ 1
SDCBP-209ENST00000522243 SFSWAPQ12872 951 aaKnown RBP21.29■■□□□ 1
SDCBP-209ENST00000522243 MTA1Q13330 715 aa21.29■■□□□ 1
SDCBP-209ENST00000522243 TEAD4Q15561 434 aa21.29■■□□□ 1
SDCBP-209ENST00000522243 TRIP6Q15654 476 aaKnown RBP21.29■■□□□ 1
SDCBP-209ENST00000522243 ALFQ53S48 1182 aa21.29■■□□□ 1
SDCBP-209ENST00000522243 BRMS1LQ5PSV4 323 aa21.29■■□□□ 1
SDCBP-209ENST00000522243 IL27RAQ6UWB1 636 aa21.29■■□□□ 1
SDCBP-209ENST00000522243 PHLDB2Q86SQ0 1253 aa21.29■■□□□ 1
SDCBP-209ENST00000522243 SETD7Q8WTS6 366 aaKnown RBP21.29■■□□□ 1
SDCBP-209ENST00000522243 NT5C3BQ969T7 300 aa21.29■■□□□ 1
SDCBP-209ENST00000522243 PPP1R9BQ96SB3 815 aa21.29■■□□□ 1
SDCBP-209ENST00000522243 ORAI3Q9BRQ5 295 aa21.29■■□□□ 1
SDCBP-209ENST00000522243 FEM1AQ9BSK4 669 aa21.29■■□□□ 1
SDCBP-209ENST00000522243 VPS28Q9UK41 221 aa21.29■■□□□ 1
SDCBP-209ENST00000522243 PLK4O00444 970 aa21.28■■□□□ 1
SDCBP-209ENST00000522243 CLDN11O75508 207 aa21.28■■□□□ 1
SDCBP-209ENST00000522243 LSM8O95777 96 aaKnown RBP21.28■■□□□ 1
SDCBP-209ENST00000522243 TPM2P07951 284 aa21.28■■□□□ 1
SDCBP-209ENST00000522243 C5AR1P21730 350 aa21.28■■□□□ 1
SDCBP-209ENST00000522243 SCNN1AP37088 669 aa21.28■■□□□ 1
SDCBP-209ENST00000522243 METAP1P53582 386 aa21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms