RNA–Protein interactions for RNA: ENST00000521401.1

HOXA3-204, Transcript of homeobox A3, humanhuman

TSL 3

Gene HOXA3, Length 598 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-204ENST00000521401 DCAF12L1Q5VU92 463 aa22.19■■□□□ 1.14
HOXA3-204ENST00000521401 ZNF776Q68DI1 518 aaPredicted RBP22.19■■□□□ 1.14
HOXA3-204ENST00000521401 TRIM72Q6ZMU5 477 aa22.19■■□□□ 1.14
HOXA3-204ENST00000521401 RABEPKQ7Z6M1 372 aa22.19■■□□□ 1.14
HOXA3-204ENST00000521401 PHLDB2Q86SQ0 1253 aa22.19■■□□□ 1.14
HOXA3-204ENST00000521401 EMC1Q8N766 993 aa22.19■■□□□ 1.14
HOXA3-204ENST00000521401 PTPRN2Q92932 1015 aa22.19■■□□□ 1.14
HOXA3-204ENST00000521401 C1orf74Q96LT6 269 aa22.19■■□□□ 1.14
HOXA3-204ENST00000521401 C11orf70Q9BRQ4 267 aa22.19■■□□□ 1.14
HOXA3-204ENST00000521401 FUCA2Q9BTY2 467 aa22.19■■□□□ 1.14
HOXA3-204ENST00000521401 METTL5Q9NRN9 209 aaKnown RBP22.19■■□□□ 1.14
HOXA3-204ENST00000521401 TBC1D30Q9Y2I9 924 aa22.19■■□□□ 1.14
HOXA3-204ENST00000521401 DRGXA6NNA5 263 aa22.18■■□□□ 1.14
HOXA3-204ENST00000521401 CLDN11O75508 207 aa22.18■■□□□ 1.14
HOXA3-204ENST00000521401 ENDOD1O94919 500 aa22.18■■□□□ 1.14
HOXA3-204ENST00000521401 DNTTP04053 509 aa22.18■■□□□ 1.14
HOXA3-204ENST00000521401 CDH4P55283 916 aa22.18■■□□□ 1.14
HOXA3-204ENST00000521401 OXCT1P55809 520 aa22.18■■□□□ 1.14
HOXA3-204ENST00000521401 SND1Q7KZF4 910 aaKnown RBP eCLIP22.18■■□□□ 1.14
HOXA3-204ENST00000521401 FAM129BQ96TA1 746 aa22.18■■□□□ 1.14
HOXA3-204ENST00000521401 FEM1AQ9BSK4 669 aa22.18■■□□□ 1.14
HOXA3-204ENST00000521401 NAT10Q9H0A0 1025 aaKnown RBP22.18■■□□□ 1.14
HOXA3-204ENST00000521401 PABPC3Q9H361 631 aaKnown RBP22.18■■□□□ 1.14
HOXA3-204ENST00000521401 C6orf106Q9H6K1 298 aaPredicted RBP22.18■■□□□ 1.14
HOXA3-204ENST00000521401 TMEM51Q9NW97 253 aa22.18■■□□□ 1.14
HOXA3-204ENST00000521401 NCOR2Q9Y618 2525 aa22.18■■□□□ 1.14
HOXA3-204ENST00000521401 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.17■■□□□ 1.14
HOXA3-204ENST00000521401 EDDM13A0A1B0GTR0 161 aa22.17■■□□□ 1.14
HOXA3-204ENST00000521401 MEI4A8MW99 385 aa22.17■■□□□ 1.14
HOXA3-204ENST00000521401 ARHGAP33O14559 1287 aa22.17■■□□□ 1.14
HOXA3-204ENST00000521401 GJB6O95452 261 aa22.17■■□□□ 1.14
HOXA3-204ENST00000521401 RDXP35241 583 aaKnown RBP22.17■■□□□ 1.14
HOXA3-204ENST00000521401 VASPP50552 380 aaPredicted RBP22.17■■□□□ 1.14
HOXA3-204ENST00000521401 GFPT1Q06210 699 aaPredicted RBP22.17■■□□□ 1.14
HOXA3-204ENST00000521401 SULT2A1Q06520 285 aa22.17■■□□□ 1.14
HOXA3-204ENST00000521401 ZNF177Q13360 481 aaPredicted RBP22.17■■□□□ 1.14
HOXA3-204ENST00000521401 CLEC16AQ2KHT3 1053 aa22.17■■□□□ 1.14
HOXA3-204ENST00000521401 RAB6CQ53S08 254 aa22.17■■□□□ 1.14
HOXA3-204ENST00000521401 C1orf216Q8TAB5 229 aa22.17■■□□□ 1.14
HOXA3-204ENST00000521401 JOSD2Q8TAC2 188 aa22.17■■□□□ 1.14
HOXA3-204ENST00000521401 FRS2Q8WU20 508 aa22.17■■□□□ 1.14
HOXA3-204ENST00000521401 BTBD1Q9H0C5 482 aa22.17■■□□□ 1.14
HOXA3-204ENST00000521401 RAB6CQ9H0N0 254 aa22.17■■□□□ 1.14
HOXA3-204ENST00000521401 PCED1AQ9H1Q7 454 aa22.17■■□□□ 1.14
HOXA3-204ENST00000521401 RTN4Q9NQC3 1192 aaKnown RBP22.17■■□□□ 1.14
HOXA3-204ENST00000521401 SUSD2Q9UGT4 822 aa22.17■■□□□ 1.14
HOXA3-204ENST00000521401 IGLV3-10A0A075B6K4 115 aa22.16■■□□□ 1.14
HOXA3-204ENST00000521401 C2CD4BA6NLJ0 364 aa22.16■■□□□ 1.14
HOXA3-204ENST00000521401 VAV1P15498 845 aa22.16■■□□□ 1.14
HOXA3-204ENST00000521401 GSCP56915 257 aaPredicted RBP22.16■■□□□ 1.14
HOXA3-204ENST00000521401 CST6Q15828 149 aa22.16■■□□□ 1.14
HOXA3-204ENST00000521401 UAP1L1Q3KQV9 507 aa22.16■■□□□ 1.14
HOXA3-204ENST00000521401 CCDC14Q49A88 953 aa22.16■■□□□ 1.14
HOXA3-204ENST00000521401 N4BP2L1Q5TBK1 243 aaPredicted RBP22.16■■□□□ 1.14
HOXA3-204ENST00000521401 RNF219Q5W0B1 726 aaPredicted RBP22.16■■□□□ 1.14
HOXA3-204ENST00000521401 FAM131BQ86XD5 332 aa22.16■■□□□ 1.14
HOXA3-204ENST00000521401 PHF13Q86YI8 300 aaPredicted RBP22.16■■□□□ 1.14
HOXA3-204ENST00000521401 STK40Q8N2I9 435 aa22.16■■□□□ 1.14
HOXA3-204ENST00000521401 OR2I1PQ8NGU4 316 aa22.16■■□□□ 1.14
HOXA3-204ENST00000521401 RXFP2Q8WXD0 754 aa22.16■■□□□ 1.14
HOXA3-204ENST00000521401 HAPLN3Q96S86 360 aa22.16■■□□□ 1.14
HOXA3-204ENST00000521401 SERGEFQ9UGK8 458 aa22.16■■□□□ 1.14
HOXA3-204ENST00000521401 SCML1Q9UN30 329 aa22.16■■□□□ 1.14
HOXA3-204ENST00000521401 PAXBP1Q9Y5B6 917 aa22.16■■□□□ 1.14
HOXA3-204ENST00000521401 SLCO1B1Q9Y6L6 691 aa22.16■■□□□ 1.14
HOXA3-204ENST00000521401 SPTBN2O15020 2390 aa22.16■■□□□ 1.14
HOXA3-204ENST00000521401 A0A1B0GTW7 788 aa22.15■■□□□ 1.14
HOXA3-204ENST00000521401 SMTNL1A8MU46 457 aa22.15■■□□□ 1.14
HOXA3-204ENST00000521401 GIPC1O14908 333 aa22.15■■□□□ 1.14
HOXA3-204ENST00000521401 MID1O15344 667 aa22.15■■□□□ 1.14
HOXA3-204ENST00000521401 GNSP15586 552 aa22.15■■□□□ 1.14
HOXA3-204ENST00000521401 KCNA4P22459 653 aa22.15■■□□□ 1.14
HOXA3-204ENST00000521401 ATP11AP98196 1134 aa22.15■■□□□ 1.14
HOXA3-204ENST00000521401 C15orf59Q2T9L4 293 aaPredicted RBP22.15■■□□□ 1.14
HOXA3-204ENST00000521401 TTC31Q49AM3 519 aaPredicted RBP22.15■■□□□ 1.14
HOXA3-204ENST00000521401 SH3PXD2AQ5TCZ1 1133 aa22.15■■□□□ 1.14
HOXA3-204ENST00000521401 PSAPL1Q6NUJ1 521 aa22.15■■□□□ 1.14
HOXA3-204ENST00000521401 USP30Q70CQ3 517 aa22.15■■□□□ 1.14
HOXA3-204ENST00000521401 MMAAQ8IVH4 418 aaKnown RBP22.15■■□□□ 1.14
HOXA3-204ENST00000521401 ZCCHC9Q8N567 271 aaKnown RBP22.15■■□□□ 1.14
HOXA3-204ENST00000521401 BAP1Q92560 729 aa22.15■■□□□ 1.14
HOXA3-204ENST00000521401 PPP1R9BQ96SB3 815 aa22.15■■□□□ 1.14
HOXA3-204ENST00000521401 PSMB7Q99436 277 aa22.15■■□□□ 1.14
HOXA3-204ENST00000521401 AGPAT1Q99943 283 aa22.15■■□□□ 1.14
HOXA3-204ENST00000521401 GTPBP2Q9BX10 602 aaKnown RBP22.15■■□□□ 1.14
HOXA3-204ENST00000521401 SGK2Q9HBY8 427 aa22.15■■□□□ 1.14
HOXA3-204ENST00000521401 FBXL12Q9NXK8 326 aa22.15■■□□□ 1.14
HOXA3-204ENST00000521401 MPP6Q9NZW5 540 aa22.15■■□□□ 1.14
HOXA3-204ENST00000521401 ZNF212Q9UDV6 495 aa22.15■■□□□ 1.14
HOXA3-204ENST00000521401 EIF2B4Q9UI10 523 aaKnown RBP22.15■■□□□ 1.14
HOXA3-204ENST00000521401 ZBTB32Q9Y2Y4 487 aaPredicted RBP22.15■■□□□ 1.14
HOXA3-204ENST00000521401 PCDH15Q96QU1 1955 aa22.15■■□□□ 1.14
HOXA3-204ENST00000521401 C10orf142B7Z368 130 aa22.14■■□□□ 1.13
HOXA3-204ENST00000521401 E9PAM4 449 aa22.14■■□□□ 1.13
HOXA3-204ENST00000521401 ATP9BO43861 1147 aa22.14■■□□□ 1.13
HOXA3-204ENST00000521401 RNASEH1O60930 286 aaKnown RBP22.14■■□□□ 1.13
HOXA3-204ENST00000521401 SEMA4FO95754 770 aa22.14■■□□□ 1.13
HOXA3-204ENST00000521401 CSRP1P21291 193 aaKnown RBP22.14■■□□□ 1.13
HOXA3-204ENST00000521401 ZNF165P49910 485 aa22.14■■□□□ 1.13
HOXA3-204ENST00000521401 SEMA3BQ13214 749 aa22.14■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms