RNA–Protein interactions for RNA: ENST00000520166.5

TSNARE1-205, Transcript of t-SNARE domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSNARE1, Length 1,742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSNARE1-205ENST00000520166 PNKPQ96T60 521 aa17.46■□□□□ 0.39
TSNARE1-205ENST00000520166 TRIM31Q9BZY9 425 aa17.46■□□□□ 0.39
TSNARE1-205ENST00000520166 PRDM6Q9NQX0 595 aa17.46■□□□□ 0.39
TSNARE1-205ENST00000520166 NEU2Q9Y3R4 380 aa17.46■□□□□ 0.39
TSNARE1-205ENST00000520166 TRIM24O15164 1050 aa17.45■□□□□ 0.38
TSNARE1-205ENST00000520166 LATS1O95835 1130 aa17.45■□□□□ 0.38
TSNARE1-205ENST00000520166 GLDCP23378 1020 aa17.45■□□□□ 0.38
TSNARE1-205ENST00000520166 HOXD9P28356 352 aaPredicted RBP17.45■□□□□ 0.38
TSNARE1-205ENST00000520166 VPS41P49754 854 aa17.45■□□□□ 0.38
TSNARE1-205ENST00000520166 ZNF135P52742 658 aaPredicted RBP17.45■□□□□ 0.38
TSNARE1-205ENST00000520166 GALNT2Q10471 571 aa17.45■□□□□ 0.38
TSNARE1-205ENST00000520166 LY6G5CQ5SRR4 150 aa17.45■□□□□ 0.38
TSNARE1-205ENST00000520166 FYB2Q5VWT5 728 aa17.45■□□□□ 0.38
TSNARE1-205ENST00000520166 ASTLQ6HA08 431 aaPredicted RBP17.45■□□□□ 0.38
TSNARE1-205ENST00000520166 CXorf57Q6NSI4 855 aaKnown RBP17.45■□□□□ 0.38
TSNARE1-205ENST00000520166 RHBDF2Q6PJF5 856 aa17.45■□□□□ 0.38
TSNARE1-205ENST00000520166 DDX42Q86XP3 938 aaKnown RBP eCLIP17.45■□□□□ 0.38
TSNARE1-205ENST00000520166 JAMLQ86YT9 394 aa17.45■□□□□ 0.38
TSNARE1-205ENST00000520166 TTC13Q8NBP0 860 aa17.45■□□□□ 0.38
TSNARE1-205ENST00000520166 ATL2Q8NHH9 583 aa17.45■□□□□ 0.38
TSNARE1-205ENST00000520166 TTC8Q8TAM2 541 aa17.45■□□□□ 0.38
TSNARE1-205ENST00000520166 RPGRIP1Q96KN7 1286 aa17.45■□□□□ 0.38
TSNARE1-205ENST00000520166 NUP210Q8TEM1 1887 aaPredicted RBP17.45■□□□□ 0.38
TSNARE1-205ENST00000520166 NYNRINQ9P2P1 1898 aaKnown RBP17.45■□□□□ 0.38
TSNARE1-205ENST00000520166 RASA4BC9J798 803 aa17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 J3KR12 359 aa17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 KCNK1O00180 336 aa17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 MCF2LO15068 1137 aa17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 RASA4O43374 803 aa17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 MZF1P28698 734 aaPredicted RBP17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 WEE1P30291 646 aa17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 HTR7P34969 479 aa17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 MTHFRP42898 656 aa17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 NR2C2P49116 596 aa17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 FNTAP49354 379 aa17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 AP1B1Q10567 949 aa17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 ELF2Q15723 593 aa17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 RABGAP1LQ5R372 815 aa17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 C8orf74Q6P047 294 aa17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 DRICH1Q6PGQ1 229 aaPredicted RBP17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 UMODL1-AS1Q8N2C9 162 aa17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 CPXM2Q8N436 756 aa17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 ALLCQ8N6M5 410 aa17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 NAT16Q8N8M0 369 aa17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 ZNF419Q96HQ0 510 aaPredicted RBP17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 EBF3Q9H4W6 596 aa17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 DRG1Q9Y295 367 aaKnown RBP17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 F5H423 210 aaPredicted RBP17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 SGK1O00141 431 aa17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 KCNN4O15554 427 aa17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 IFNB1P01574 187 aa17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 ITGAVP06756 1048 aa17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 TCF3P15923 654 aa17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 GARSP41250 739 aaKnown RBP17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 CDH4P55283 916 aa17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 BPIFB1Q8TDL5 484 aa17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 UBXN4Q92575 508 aa17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 IRF7Q92985 503 aa17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 QKIQ96PU8 341 aaKnown RBP eCLIP17.44■□□□□ 0.382e-7■■■■□ 26.7
TSNARE1-205ENST00000520166 TRPV4Q9HBA0 871 aa17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 DUS2Q9NX74 493 aaKnown RBP17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 ZNF510Q9Y2H8 683 aa17.44■□□□□ 0.38
TSNARE1-205ENST00000520166 DENND4AQ7Z401 1863 aa17.43■□□□□ 0.38
TSNARE1-205ENST00000520166 NEDD8-MDP1E9PL57 170 aa17.43■□□□□ 0.38
TSNARE1-205ENST00000520166 CTIFO43310 598 aaKnown RBP17.43■□□□□ 0.38
TSNARE1-205ENST00000520166 MBTPS2O43462 519 aa17.43■□□□□ 0.38
TSNARE1-205ENST00000520166 MAFKO60675 156 aa17.43■□□□□ 0.38
TSNARE1-205ENST00000520166 HEXIM1O94992 359 aaKnown RBP17.43■□□□□ 0.38
TSNARE1-205ENST00000520166 CHKAP35790 457 aa17.43■□□□□ 0.38
TSNARE1-205ENST00000520166 TFF2Q03403 129 aa17.43■□□□□ 0.38
TSNARE1-205ENST00000520166 PRKD1Q15139 912 aaPredicted RBP17.43■□□□□ 0.38
TSNARE1-205ENST00000520166 ANO4Q32M45 955 aa17.43■□□□□ 0.38
TSNARE1-205ENST00000520166 EML3Q32P44 896 aa17.43■□□□□ 0.38
TSNARE1-205ENST00000520166 SLC45A4Q5BKX6 768 aa17.43■□□□□ 0.38
TSNARE1-205ENST00000520166 RNF219Q5W0B1 726 aaPredicted RBP17.43■□□□□ 0.38
TSNARE1-205ENST00000520166 NAIF1Q69YI7 327 aaPredicted RBP17.43■□□□□ 0.38
TSNARE1-205ENST00000520166 GSTA5Q7RTV2 222 aa17.43■□□□□ 0.38
TSNARE1-205ENST00000520166 HJURPQ8NCD3 748 aaPredicted RBP17.43■□□□□ 0.38
TSNARE1-205ENST00000520166 OSCP1Q8WVF1 389 aa17.43■□□□□ 0.38
TSNARE1-205ENST00000520166 TFB1MQ8WVM0 346 aaKnown RBP17.43■□□□□ 0.38
TSNARE1-205ENST00000520166 DDX50Q9BQ39 737 aaKnown RBP17.43■□□□□ 0.38
TSNARE1-205ENST00000520166 DPH5Q9H2P9 285 aa17.43■□□□□ 0.38
TSNARE1-205ENST00000520166 ZFP14Q9HCL3 533 aa17.43■□□□□ 0.38
TSNARE1-205ENST00000520166 SPHK2Q9NRA0 654 aa17.43■□□□□ 0.38
TSNARE1-205ENST00000520166 HOMER3Q9NSC5 361 aa17.43■□□□□ 0.38
TSNARE1-205ENST00000520166 SEPT10Q9P0V9 454 aa17.43■□□□□ 0.38
TSNARE1-205ENST00000520166 ZMYM5Q9UJ78 669 aa17.43■□□□□ 0.38
TSNARE1-205ENST00000520166 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP17.42■□□□□ 0.38
TSNARE1-205ENST00000520166 A0A1B0GVM2 712 aa17.42■□□□□ 0.38
TSNARE1-205ENST00000520166 BCLAF3A2AJT9 711 aaKnown RBP17.42■□□□□ 0.38
TSNARE1-205ENST00000520166 TCAF2A6NFQ2 919 aa17.42■□□□□ 0.38
TSNARE1-205ENST00000520166 H0Y626 953 aa17.42■□□□□ 0.38
TSNARE1-205ENST00000520166 CLDN11O75508 207 aa17.42■□□□□ 0.38
TSNARE1-205ENST00000520166 GUCY2DQ02846 1103 aa17.42■□□□□ 0.38
TSNARE1-205ENST00000520166 MESP2Q0VG99 397 aa17.42■□□□□ 0.38
TSNARE1-205ENST00000520166 WASHC5Q12768 1159 aa17.42■□□□□ 0.38
TSNARE1-205ENST00000520166 MTA1Q13330 715 aa17.42■□□□□ 0.38
TSNARE1-205ENST00000520166 ZNF177Q13360 481 aaPredicted RBP17.42■□□□□ 0.38
TSNARE1-205ENST00000520166 POLD3Q15054 466 aaPredicted RBP17.42■□□□□ 0.38
TSNARE1-205ENST00000520166 PDK1Q15118 436 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms