RNA–Protein interactions for RNA: ENST00000520133.5

COL13A1-212, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL13A1, Length 1,833 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-212ENST00000520133 ARTNQ5T4W7 220 aa27.6■■■□□ 2.01
COL13A1-212ENST00000520133 TIGD7Q6NT04 549 aaPredicted RBP27.6■■■□□ 2.01
COL13A1-212ENST00000520133 ZNF276Q8N554 614 aa27.6■■■□□ 2.01
COL13A1-212ENST00000520133 DPF3Q92784 378 aa27.6■■■□□ 2.01
COL13A1-212ENST00000520133 PRMT1Q99873 361 aaKnown RBP27.6■■■□□ 2.01
COL13A1-212ENST00000520133 NAT9Q9BTE0 207 aa27.6■■■□□ 2.01
COL13A1-212ENST00000520133 SLC39A8Q9C0K1 460 aa27.6■■■□□ 2.01
COL13A1-212ENST00000520133 MPP6Q9NZW5 540 aa27.6■■■□□ 2.01
COL13A1-212ENST00000520133 SMG5Q9UPR3 1016 aaKnown RBP27.6■■■□□ 2.01
COL13A1-212ENST00000520133 IQANK1A0A1B0GTG1 560 aa27.6■■■□□ 2.01
COL13A1-212ENST00000520133 TRIM43BA6NCK2 446 aa27.6■■■□□ 2.01
COL13A1-212ENST00000520133 ARHGAP42A6NI28 874 aa27.6■■■□□ 2.01
COL13A1-212ENST00000520133 SUN1O94901 812 aa27.6■■■□□ 2.01
COL13A1-212ENST00000520133 ABLIM3O94929 683 aa27.6■■■□□ 2.01
COL13A1-212ENST00000520133 AP2A1O95782 977 aa27.6■■■□□ 2.01
COL13A1-212ENST00000520133 JCHAINP01591 159 aa27.6■■■□□ 2.01
COL13A1-212ENST00000520133 IGLV3-27P01718 113 aa27.6■■■□□ 2.01
COL13A1-212ENST00000520133 ITGB8P26012 769 aa27.6■■■□□ 2.01
COL13A1-212ENST00000520133 PRPSAP1Q14558 356 aa27.6■■■□□ 2.01
COL13A1-212ENST00000520133 MPP5Q8N3R9 675 aa27.6■■■□□ 2.01
COL13A1-212ENST00000520133 ANKRD42Q8N9B4 389 aa27.6■■■□□ 2.01
COL13A1-212ENST00000520133 TRIM43Q96BQ3 446 aaPredicted RBP27.6■■■□□ 2.01
COL13A1-212ENST00000520133 ZYG11BQ9C0D3 744 aa27.6■■■□□ 2.01
COL13A1-212ENST00000520133 SPG21Q9NZD8 308 aa27.6■■■□□ 2.01
COL13A1-212ENST00000520133 FAM47DPA6NHR8 397 aa27.59■■■□□ 2.01
COL13A1-212ENST00000520133 RHOQP17081 205 aa27.59■■■□□ 2.01
COL13A1-212ENST00000520133 GBP2P32456 591 aaPredicted RBP27.59■■■□□ 2.01
COL13A1-212ENST00000520133 CD68P34810 354 aaPredicted RBP27.59■■■□□ 2.01
COL13A1-212ENST00000520133 AFMIDQ63HM1 303 aa27.59■■■□□ 2.01
COL13A1-212ENST00000520133 CASC4Q6P4E1 433 aa27.59■■■□□ 2.01
COL13A1-212ENST00000520133 TMCO2Q7Z6W1 182 aaPredicted RBP27.59■■■□□ 2.01
COL13A1-212ENST00000520133 LRRC6Q86X45 466 aa27.59■■■□□ 2.01
COL13A1-212ENST00000520133 MGARPQ8TDB4 240 aa27.59■■■□□ 2.01
COL13A1-212ENST00000520133 ZNF473Q8WTR7 871 aaKnown RBP27.59■■■□□ 2.01
COL13A1-212ENST00000520133 CHMP6Q96FZ7 201 aa27.59■■■□□ 2.01
COL13A1-212ENST00000520133 CCSER2Q9H7U1 834 aa27.59■■■□□ 2.01
COL13A1-212ENST00000520133 HBS1LQ9Y450 684 aaKnown RBP27.59■■■□□ 2.01
COL13A1-212ENST00000520133 PRPF4O43172 522 aaKnown RBP eCLIP27.58■■■□□ 2.01
COL13A1-212ENST00000520133 CSH1P0DML2 217 aa27.58■■■□□ 2.01
COL13A1-212ENST00000520133 CSH2P0DML3 217 aa27.58■■■□□ 2.01
COL13A1-212ENST00000520133 CCNB1P14635 433 aa27.58■■■□□ 2.01
COL13A1-212ENST00000520133 NFKB1P19838 968 aa27.58■■■□□ 2.01
COL13A1-212ENST00000520133 SLC18A1P54219 525 aa27.58■■■□□ 2.01
COL13A1-212ENST00000520133 SESN2P58004 480 aaPredicted RBP27.58■■■□□ 2.01
COL13A1-212ENST00000520133 SLC26A11Q86WA9 606 aa27.58■■■□□ 2.01
COL13A1-212ENST00000520133 ZSCAN18Q8TBC5 510 aaPredicted RBP27.58■■■□□ 2.01
COL13A1-212ENST00000520133 SGSM3Q96HU1 749 aa27.58■■■□□ 2.01
COL13A1-212ENST00000520133 MRPL42Q9Y6G3 142 aaKnown RBP27.58■■■□□ 2.01
COL13A1-212ENST00000520133 MATN3O15232 486 aa27.57■■■□□ 2
COL13A1-212ENST00000520133 PSMD3O43242 534 aa27.57■■■□□ 2
COL13A1-212ENST00000520133 MAFKO60675 156 aa27.57■■■□□ 2
COL13A1-212ENST00000520133 PIAS1O75925 651 aa27.57■■■□□ 2
COL13A1-212ENST00000520133 BAIAP3O94812 1187 aa27.57■■■□□ 2
COL13A1-212ENST00000520133 URODP06132 367 aa27.57■■■□□ 2
COL13A1-212ENST00000520133 CCT5P48643 541 aa27.57■■■□□ 2
COL13A1-212ENST00000520133 HNRNPH2P55795 449 aaKnown RBP27.57■■■□□ 2
COL13A1-212ENST00000520133 CYS1Q717R9 158 aa27.57■■■□□ 2
COL13A1-212ENST00000520133 CTAGE3PQ8IX95 158 aa27.57■■■□□ 2
COL13A1-212ENST00000520133 ZNF683Q8IZ20 524 aa27.57■■■□□ 2
COL13A1-212ENST00000520133 ZNF512Q96ME7 567 aaPredicted RBP27.57■■■□□ 2
COL13A1-212ENST00000520133 PLAC1Q9HBJ0 212 aa27.57■■■□□ 2
COL13A1-212ENST00000520133 SSU72Q9NP77 194 aaKnown RBP27.57■■■□□ 2
COL13A1-212ENST00000520133 NDFIP2Q9NV92 336 aa27.57■■■□□ 2
COL13A1-212ENST00000520133 NYNRINQ9P2P1 1898 aaKnown RBP27.57■■■□□ 2
COL13A1-212ENST00000520133 IGLV3-10A0A075B6K4 115 aa27.57■■■□□ 2
COL13A1-212ENST00000520133 HMBSP08397 361 aa27.57■■■□□ 2
COL13A1-212ENST00000520133 ATP5C1P36542 298 aaKnown RBP27.57■■■□□ 2
COL13A1-212ENST00000520133 NDST2P52849 883 aa27.57■■■□□ 2
COL13A1-212ENST00000520133 SNX30Q5VWJ9 437 aa27.57■■■□□ 2
COL13A1-212ENST00000520133 DDX53Q86TM3 631 aaKnown RBP27.57■■■□□ 2
COL13A1-212ENST00000520133 PRPF39Q86UA1 669 aaKnown RBP27.57■■■□□ 2
COL13A1-212ENST00000520133 UMODL1-AS1Q8N2C9 162 aa27.57■■■□□ 2
COL13A1-212ENST00000520133 PPM1NQ8N819 430 aa27.57■■■□□ 2
COL13A1-212ENST00000520133 FAM107BQ9H098 131 aa27.57■■■□□ 2
COL13A1-212ENST00000520133 CYP4F11Q9HBI6 524 aa27.57■■■□□ 2
COL13A1-212ENST00000520133 TMEM248Q9NWD8 314 aa27.57■■■□□ 2
COL13A1-212ENST00000520133 DNMT3LQ9UJW3 386 aa27.57■■■□□ 2
COL13A1-212ENST00000520133 SEC24AO95486 1093 aa27.56■■■□□ 2
COL13A1-212ENST00000520133 C1QAP02745 245 aa27.56■■■□□ 2
COL13A1-212ENST00000520133 PGAM1P18669 254 aa27.56■■■□□ 2
COL13A1-212ENST00000520133 MGAT1P26572 445 aa27.56■■■□□ 2
COL13A1-212ENST00000520133 ALDH1A3P47895 512 aa27.56■■■□□ 2
COL13A1-212ENST00000520133 IFNAR2P48551 515 aa27.56■■■□□ 2
COL13A1-212ENST00000520133 MPP2Q14168 576 aa27.56■■■□□ 2
COL13A1-212ENST00000520133 LRRC14Q15048 493 aa27.56■■■□□ 2
COL13A1-212ENST00000520133 STEAP4Q687X5 459 aa27.56■■■□□ 2
COL13A1-212ENST00000520133 KCTD11Q693B1 232 aa27.56■■■□□ 2
COL13A1-212ENST00000520133 ARHGAP36Q6ZRI8 547 aa27.56■■■□□ 2
COL13A1-212ENST00000520133 TAX1BP1Q86VP1 789 aa27.56■■■□□ 2
COL13A1-212ENST00000520133 GORASP1Q9BQQ3 440 aa27.56■■■□□ 2
COL13A1-212ENST00000520133 ZNF180Q9UJW8 692 aa27.56■■■□□ 2
COL13A1-212ENST00000520133 AP3B1O00203 1094 aa27.55■■■□□ 2
COL13A1-212ENST00000520133 EBAG9O00559 213 aa27.55■■■□□ 2
COL13A1-212ENST00000520133 SPARCL1Q14515 664 aa27.55■■■□□ 2
COL13A1-212ENST00000520133 ANO4Q32M45 955 aa27.55■■■□□ 2
COL13A1-212ENST00000520133 LGSNQ5TDP6 509 aa27.55■■■□□ 2
COL13A1-212ENST00000520133 RAP1GAP2Q684P5 730 aa27.55■■■□□ 2
COL13A1-212ENST00000520133 FOXR1Q6PIV2 292 aa27.55■■■□□ 2
COL13A1-212ENST00000520133 CPLX4Q7Z7G2 160 aa27.55■■■□□ 2
COL13A1-212ENST00000520133 MZB1Q8WU39 189 aa27.55■■■□□ 2
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms