RNA–Protein interactions for RNA: ENST00000518074.5

SPIDR-206, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 2,819 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-206ENST00000518074 DHX35Q9H5Z1 703 aaKnown RBP11.28□□□□□ -0.6
SPIDR-206ENST00000518074 SLCO1B3Q9NPD5 702 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 EPS15L1Q9UBC2 864 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 SORCS3Q9UPU3 1222 aa11.28□□□□□ -0.6
SPIDR-206ENST00000518074 SPTBN5Q9NRC6 3674 aaKnown RBP11.28□□□□□ -0.6
SPIDR-206ENST00000518074 CLUHO75153 1309 aa11.27□□□□□ -0.6
SPIDR-206ENST00000518074 CCDC195A0A1B0GUA6 201 aa11.27□□□□□ -0.6
SPIDR-206ENST00000518074 APOC4-APOC2K7ER74 178 aa11.27□□□□□ -0.6
SPIDR-206ENST00000518074 PAPSS1O43252 624 aaPredicted RBP11.27□□□□□ -0.6
SPIDR-206ENST00000518074 SNX3O60493 162 aa11.27□□□□□ -0.6
SPIDR-206ENST00000518074 B3GAT3O94766 335 aa11.27□□□□□ -0.6
SPIDR-206ENST00000518074 FSBPO95073 299 aa11.27□□□□□ -0.6
SPIDR-206ENST00000518074 APOC2P02655 101 aa11.27□□□□□ -0.6
SPIDR-206ENST00000518074 KRT4P19013 534 aa11.27□□□□□ -0.6
SPIDR-206ENST00000518074 IL4RP24394 825 aa11.27□□□□□ -0.6
SPIDR-206ENST00000518074 IGFBP6P24592 240 aaPredicted RBP11.27□□□□□ -0.6
SPIDR-206ENST00000518074 ACAT1P24752 427 aaKnown RBP11.27□□□□□ -0.6
SPIDR-206ENST00000518074 MRPL58Q14197 206 aaKnown RBP11.27□□□□□ -0.6
SPIDR-206ENST00000518074 SEPT7Q16181 437 aaKnown RBP11.27□□□□□ -0.6
SPIDR-206ENST00000518074 TMC5Q6UXY8 1006 aa11.27□□□□□ -0.6
SPIDR-206ENST00000518074 BEST2Q8NFU1 509 aa11.27□□□□□ -0.6
SPIDR-206ENST00000518074 CKAP2Q8WWK9 683 aa11.27□□□□□ -0.6
SPIDR-206ENST00000518074 FAM149B1Q96BN6 582 aa11.27□□□□□ -0.6
SPIDR-206ENST00000518074 ZNF707Q96C28 371 aaPredicted RBP11.27□□□□□ -0.6
SPIDR-206ENST00000518074 PITPNM3Q9BZ71 974 aa11.27□□□□□ -0.6
SPIDR-206ENST00000518074 SLC40A1Q9NP59 571 aa11.27□□□□□ -0.6
SPIDR-206ENST00000518074 SHOC2Q9UQ13 582 aa11.27□□□□□ -0.6
SPIDR-206ENST00000518074 VWA8A3KMH1 1905 aa11.27□□□□□ -0.6
SPIDR-206ENST00000518074 C2orf16Q68DN1 1984 aa11.27□□□□□ -0.61
SPIDR-206ENST00000518074 TBC1D4O60343 1298 aa11.27□□□□□ -0.61
SPIDR-206ENST00000518074 RBL1P28749 1068 aa11.27□□□□□ -0.61
SPIDR-206ENST00000518074 ELK3P41970 407 aa11.27□□□□□ -0.61
SPIDR-206ENST00000518074 MNAT1P51948 309 aa11.27□□□□□ -0.61
SPIDR-206ENST00000518074 SOX4Q06945 474 aaPredicted RBP11.27□□□□□ -0.61
SPIDR-206ENST00000518074 SOWAHAQ2M3V2 549 aa11.27□□□□□ -0.61
SPIDR-206ENST00000518074 TRPM8Q7Z2W7 1104 aa11.27□□□□□ -0.61
SPIDR-206ENST00000518074 TBC1D1Q86TI0 1168 aaPredicted RBP11.27□□□□□ -0.61
SPIDR-206ENST00000518074 TRABD2AQ86V40 505 aa11.27□□□□□ -0.61
SPIDR-206ENST00000518074 CTAGE3PQ8IX95 158 aa11.27□□□□□ -0.61
SPIDR-206ENST00000518074 CCDC110Q8TBZ0 833 aa11.27□□□□□ -0.61
SPIDR-206ENST00000518074 SUSD3Q96L08 255 aa11.27□□□□□ -0.61
SPIDR-206ENST00000518074 TTC25Q96NG3 672 aa11.27□□□□□ -0.61
SPIDR-206ENST00000518074 PRRX2Q99811 253 aa11.27□□□□□ -0.61
SPIDR-206ENST00000518074 TRIM56Q9BRZ2 755 aaKnown RBP11.27□□□□□ -0.61
SPIDR-206ENST00000518074 PHACTR1Q9C0D0 580 aa11.27□□□□□ -0.61
SPIDR-206ENST00000518074 IGSF9Q9P2J2 1179 aa11.27□□□□□ -0.61
SPIDR-206ENST00000518074 UBQLN1Q9UMX0 589 aaKnown RBP11.27□□□□□ -0.61
SPIDR-206ENST00000518074 SPTLC1O15269 473 aa11.27□□□□□ -0.61
SPIDR-206ENST00000518074 GABBR2O75899 941 aa11.27□□□□□ -0.61
SPIDR-206ENST00000518074 UBOX5O94941 541 aa11.27□□□□□ -0.61
SPIDR-206ENST00000518074 APRTP07741 180 aa11.27□□□□□ -0.61
SPIDR-206ENST00000518074 GNL1P36915 607 aaPredicted RBP11.27□□□□□ -0.61
SPIDR-206ENST00000518074 GABRB2P47870 512 aa11.27□□□□□ -0.61
SPIDR-206ENST00000518074 IL9RQ01113 521 aa11.27□□□□□ -0.61
SPIDR-206ENST00000518074 INCA1Q0VD86 236 aa11.27□□□□□ -0.61
SPIDR-206ENST00000518074 SLC8B1Q6J4K2 584 aa11.27□□□□□ -0.61
SPIDR-206ENST00000518074 PRSS55Q6UWB4 352 aaPredicted RBP11.27□□□□□ -0.61
SPIDR-206ENST00000518074 NAT8LQ8N9F0 302 aa11.27□□□□□ -0.61
SPIDR-206ENST00000518074 APPL2Q8NEU8 664 aa11.27□□□□□ -0.61
SPIDR-206ENST00000518074 SLC2A14Q8TDB8 520 aa11.27□□□□□ -0.61
SPIDR-206ENST00000518074 WDR83Q9BRX9 315 aaKnown RBP11.27□□□□□ -0.61
SPIDR-206ENST00000518074 SNRNP25Q9BV90 132 aaKnown RBP11.27□□□□□ -0.61
SPIDR-206ENST00000518074 MUC3BQ9H195 1237 aa11.27□□□□□ -0.61
SPIDR-206ENST00000518074 PIH1D1Q9NWS0 290 aaKnown RBP11.27□□□□□ -0.61
SPIDR-206ENST00000518074 LGALS13Q9UHV8 139 aa11.27□□□□□ -0.61
SPIDR-206ENST00000518074 PCDHB8Q9UN66 801 aa11.27□□□□□ -0.61
SPIDR-206ENST00000518074 FARP1Q9Y4F1 1045 aaPredicted RBP11.27□□□□□ -0.61
SPIDR-206ENST00000518074 FAM86C2PA6NEL3 165 aa11.26□□□□□ -0.61
SPIDR-206ENST00000518074 CLDN5O00501 218 aa11.26□□□□□ -0.61
SPIDR-206ENST00000518074 ZBED1O96006 694 aa11.26□□□□□ -0.61
SPIDR-206ENST00000518074 GBP2P32456 591 aaPredicted RBP11.26□□□□□ -0.61
SPIDR-206ENST00000518074 PTPN7P35236 360 aa11.26□□□□□ -0.61
SPIDR-206ENST00000518074 MSH2P43246 934 aa11.26□□□□□ -0.61
SPIDR-206ENST00000518074 SLC6A3Q01959 620 aa11.26□□□□□ -0.61
SPIDR-206ENST00000518074 MPP3Q13368 585 aa11.26□□□□□ -0.61
SPIDR-206ENST00000518074 SLC1A5Q15758 541 aa11.26□□□□□ -0.61
SPIDR-206ENST00000518074 OLFML1Q6UWY5 402 aa11.26□□□□□ -0.61
SPIDR-206ENST00000518074 PACS1Q6VY07 963 aa11.26□□□□□ -0.61
SPIDR-206ENST00000518074 CYP4V2Q6ZWL3 525 aaPredicted RBP11.26□□□□□ -0.61
SPIDR-206ENST00000518074 NT5DC4Q86YG4 428 aa11.26□□□□□ -0.61
SPIDR-206ENST00000518074 MAP7D3Q8IWC1 876 aa11.26□□□□□ -0.61
SPIDR-206ENST00000518074 KIF2BQ8N4N8 673 aa11.26□□□□□ -0.61
SPIDR-206ENST00000518074 PLD5Q8N7P1 536 aa11.26□□□□□ -0.61
SPIDR-206ENST00000518074 CCDC63Q8NA47 563 aa11.26□□□□□ -0.61
SPIDR-206ENST00000518074 SMG7Q92540 1137 aaKnown RBP11.26□□□□□ -0.61
SPIDR-206ENST00000518074 B3GALT6Q96L58 329 aa11.26□□□□□ -0.61
SPIDR-206ENST00000518074 RNF157Q96PX1 679 aa11.26□□□□□ -0.61
SPIDR-206ENST00000518074 SNX25Q9H3E2 840 aa11.26□□□□□ -0.61
SPIDR-206ENST00000518074 TMPRSS4Q9NRS4 437 aa11.26□□□□□ -0.61
SPIDR-206ENST00000518074 UBAP1Q9NZ09 502 aa11.26□□□□□ -0.61
SPIDR-206ENST00000518074 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.26□□□□□ -0.617e-6■■■■□ 20.5
SPIDR-206ENST00000518074 TCEA3O75764 348 aa11.26□□□□□ -0.61
SPIDR-206ENST00000518074 SUN1O94901 812 aa11.26□□□□□ -0.61
SPIDR-206ENST00000518074 GEMIN4P57678 1058 aaKnown RBP11.26□□□□□ -0.61
SPIDR-206ENST00000518074 USP4Q13107 963 aa11.26□□□□□ -0.61
SPIDR-206ENST00000518074 C9orf57Q5W0N0 161 aa11.26□□□□□ -0.61
SPIDR-206ENST00000518074 TPGS2Q68CL5 300 aa11.26□□□□□ -0.61
SPIDR-206ENST00000518074 PPP1R21Q6ZMI0 780 aa11.26□□□□□ -0.61
SPIDR-206ENST00000518074 CEP128Q6ZU80 1094 aa11.26□□□□□ -0.61
SPIDR-206ENST00000518074 PCGF5Q86SE9 256 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms