RNA–Protein interactions for RNA: ENST00000517434.2

PCDHGA6-201, Transcript of protocadherin gamma subfamily A, 6, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA6, Length 4,775 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6-201ENST00000517434 TBX2Q13207 712 aaPredicted RBP12.49□□□□□ -0.41
PCDHGA6-201ENST00000517434 PCSK7Q16549 785 aa12.49□□□□□ -0.41
PCDHGA6-201ENST00000517434 PKN3Q6P5Z2 889 aa12.49□□□□□ -0.41
PCDHGA6-201ENST00000517434 SYTL1Q8IYJ3 562 aa12.49□□□□□ -0.41
PCDHGA6-201ENST00000517434 PPTC7Q8NI37 304 aa12.49□□□□□ -0.41
PCDHGA6-201ENST00000517434 TADA1Q96BN2 335 aa12.49□□□□□ -0.41
PCDHGA6-201ENST00000517434 WDR41Q9HAD4 459 aa12.49□□□□□ -0.41
PCDHGA6-201ENST00000517434 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.49□□□□□ -0.41
PCDHGA6-201ENST00000517434 OR6C75A6NL08 312 aa12.49□□□□□ -0.41
PCDHGA6-201ENST00000517434 SOAT2O75908 522 aa12.49□□□□□ -0.41
PCDHGA6-201ENST00000517434 KRT36O76013 467 aa12.49□□□□□ -0.41
PCDHGA6-201ENST00000517434 SERPIND1P05546 499 aa12.49□□□□□ -0.41
PCDHGA6-201ENST00000517434 CHKAP35790 457 aa12.49□□□□□ -0.41
PCDHGA6-201ENST00000517434 CASP5P51878 434 aa12.49□□□□□ -0.41
PCDHGA6-201ENST00000517434 SKP1P63208 163 aa12.49□□□□□ -0.41
PCDHGA6-201ENST00000517434 ITGA7Q13683 1181 aa12.49□□□□□ -0.41
PCDHGA6-201ENST00000517434 TCHHL1Q5QJ38 904 aaPredicted RBP12.49□□□□□ -0.41
PCDHGA6-201ENST00000517434 ZFPM1Q8IX07 1006 aa12.49□□□□□ -0.41
PCDHGA6-201ENST00000517434 ZNF398Q8TD17 642 aa12.49□□□□□ -0.41
PCDHGA6-201ENST00000517434 UPF1Q92900 1129 aaKnown RBP eCLIP12.49□□□□□ -0.41
PCDHGA6-201ENST00000517434 PDGFCQ9NRA1 345 aa12.49□□□□□ -0.41
PCDHGA6-201ENST00000517434 SPATA31C2B4DYI2 1134 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 CYTH3O43739 400 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 CYP2A6P11509 494 aaPredicted RBP12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 MAPK8P45983 427 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 GCNT1Q02742 428 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 GRIK3Q13003 919 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 ZNF268Q14587 947 aaPredicted RBP12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 AMHR2Q16671 573 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 LIN52Q52LA3 116 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 IKBIPQ70UQ0 350 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 MAP4K3Q8IVH8 894 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 VCPIP1Q96JH7 1222 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 SMIM35A0A1B0GVV1 85 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 PIPSLA2A3N6 862 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 C5orf58C9J3I9 102 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 E9PBE3 544 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 SLITRK3O94933 977 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 IGSF6O95976 241 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 LDLRP01130 860 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 CNTFP26441 200 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 RTP1P59025 263 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 IL5RAQ01344 420 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 C1QBPQ07021 282 aaKnown RBP12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 LPIN1Q14693 890 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 SPDYE7PQ495Y7 208 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 LBX2Q6XYB7 198 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 SV2AQ7L0J3 742 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 DHDDSQ86SQ9 333 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 POC5Q8NA72 575 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 FBXO36Q8NEA4 188 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 ZNF75CPQ92670 426 aaPredicted RBP12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 TBC1D13Q9NVG8 400 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 SLC39A10Q9ULF5 831 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 SORCS3Q9UPU3 1222 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 RPTORQ8N122 1335 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 LTBP3Q9NS15 1303 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 PEX1O43933 1283 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 CYP11B1P15538 503 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 CHRM3P20309 590 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 KRT73Q86Y46 540 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 CREG2Q8IUH2 290 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 SETD9Q8NE22 299 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 PYDC1Q8WXC3 89 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 LENG9Q96B70 501 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 ELMO2Q96JJ3 720 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 GAD1Q99259 594 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 THUMPD3Q9BV44 507 aaKnown RBP12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 TRMT6Q9UJA5 497 aaKnown RBP12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 SNCAIPQ9Y6H5 919 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 BCL9LQ86UU0 1499 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 SNTNA6NMZ2 147 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 VPS26AO75436 327 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 MAFO75444 373 aaPredicted RBP12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 RECQL4O94761 1208 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 NDUFV1P49821 464 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 ZNF438Q7Z4V0 828 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 HASPINQ8TF76 798 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 TLR10Q9BXR5 811 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 SPG21Q9NZD8 308 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 ARHGAP20Q9P2F6 1191 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 PRELID1Q9Y255 219 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 WDR37Q9Y2I8 494 aa12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP12.48□□□□□ -0.41
PCDHGA6-201ENST00000517434 RGPD8O14715 1765 aaPredicted RBP12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 DPPA5A6NC42 116 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 RAMP2O60895 175 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 ANPEPP15144 967 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 YWHAZP63104 245 aaKnown RBP12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 ZNF846Q147U1 533 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 DCLRE1AQ6PJP8 1040 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 KDELC2Q7Z4H8 507 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 EXOC3L1Q86VI1 746 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 CCDC33Q8N5R6 958 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 VPS33AQ96AX1 596 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 CCDC126Q96EE4 140 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 COX4I2Q96KJ9 171 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 SENP8Q96LD8 212 aa12.47□□□□□ -0.41
PCDHGA6-201ENST00000517434 TCF7L2Q9NQB0 619 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms