RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 METTL3Q86U44 580 aaKnown RBP11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 FAM72BQ86X60 149 aa11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 PGBD3Q8N328 593 aa11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 MRGPRX3Q96LB0 322 aa11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 MRGPRX1Q96LB2 322 aa11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 TPSD1Q9BZJ3 242 aa11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 TRIM7Q9C029 511 aa11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 ZYG11BQ9C0D3 744 aa11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 NHEJ1Q9H9Q4 299 aaPredicted RBP11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 ZNF212Q9UDV6 495 aa11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 SLCO3A1Q9UIG8 710 aa11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 FZD10Q9ULW2 581 aa11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 ERVW-1Q9UQF0 538 aa11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 RAD54BQ9Y620 910 aa11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 PTPRZ1P23471 2315 aaPredicted RBP11.47□□□□□ -0.57
SCARNA20-201ENST00000516768 ILVBLA1L0T0 632 aa11.46□□□□□ -0.57
SCARNA20-201ENST00000516768 GFRA3O60609 400 aa11.46□□□□□ -0.57
SCARNA20-201ENST00000516768 LRIG2O94898 1065 aa11.46□□□□□ -0.57
SCARNA20-201ENST00000516768 HLA-EP13747 358 aa11.46□□□□□ -0.57
SCARNA20-201ENST00000516768 PRKCHP24723 683 aa11.46□□□□□ -0.57
SCARNA20-201ENST00000516768 P2RY2P41231 377 aa11.46□□□□□ -0.57
SCARNA20-201ENST00000516768 CTSOP43234 321 aaPredicted RBP11.46□□□□□ -0.57
SCARNA20-201ENST00000516768 ST8SIA6P61647 398 aa11.46□□□□□ -0.57
SCARNA20-201ENST00000516768 BYSLQ13895 437 aaKnown RBP11.46□□□□□ -0.57
SCARNA20-201ENST00000516768 PIGHQ14442 188 aaPredicted RBP11.46□□□□□ -0.57
SCARNA20-201ENST00000516768 STARD3Q14849 445 aa11.46□□□□□ -0.57
SCARNA20-201ENST00000516768 FNDC3BQ53EP0 1204 aaKnown RBP11.46□□□□□ -0.57
SCARNA20-201ENST00000516768 ERMARDQ5T6L9 678 aa11.46□□□□□ -0.57
SCARNA20-201ENST00000516768 RNF219Q5W0B1 726 aaPredicted RBP11.46□□□□□ -0.57
SCARNA20-201ENST00000516768 CEP68Q76N32 757 aa11.46□□□□□ -0.57
SCARNA20-201ENST00000516768 TMPRSS6Q8IU80 811 aa11.46□□□□□ -0.57
SCARNA20-201ENST00000516768 PYROXD2Q8N2H3 581 aa11.46□□□□□ -0.57
SCARNA20-201ENST00000516768 TC2NQ8N9U0 490 aa11.46□□□□□ -0.57
SCARNA20-201ENST00000516768 RLN3Q8WXF3 142 aa11.46□□□□□ -0.57
SCARNA20-201ENST00000516768 RPL10LQ96L21 214 aaKnown RBP11.46□□□□□ -0.57
SCARNA20-201ENST00000516768 CCDC42Q96M95 316 aa11.46□□□□□ -0.57
SCARNA20-201ENST00000516768 NCAPGQ9BPX3 1015 aa11.46□□□□□ -0.57
SCARNA20-201ENST00000516768 MKRN2Q9H000 416 aaKnown RBP11.46□□□□□ -0.57
SCARNA20-201ENST00000516768 PRSS16Q9NQE7 514 aa11.46□□□□□ -0.57
SCARNA20-201ENST00000516768 ITM2CQ9NQX7 267 aa11.46□□□□□ -0.57
SCARNA20-201ENST00000516768 BCCIPQ9P287 314 aaKnown RBP eCLIP11.46□□□□□ -0.57
SCARNA20-201ENST00000516768 RAB23Q9ULC3 237 aa11.46□□□□□ -0.57
SCARNA20-201ENST00000516768 INVSQ9Y283 1065 aa11.46□□□□□ -0.57
SCARNA20-201ENST00000516768 RIF1Q5UIP0 2472 aaKnown RBP11.46□□□□□ -0.58
SCARNA20-201ENST00000516768 MYO15AQ9UKN7 3530 aa11.46□□□□□ -0.58
SCARNA20-201ENST00000516768 PIEZO1Q92508 2521 aa11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 A0A0D9SEW6 157 aa11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 TARSL2A2RTX5 802 aaKnown RBP11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 DCLK1O15075 740 aa11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 AKR1B10O60218 316 aa11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 ZNF217O75362 1048 aa11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 RHOQP17081 205 aa11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 NDUFV2P19404 249 aa11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 MIPP30301 263 aa11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 PCK1P35558 622 aa11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 NNMTP40261 264 aa11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 COPAP53621 1224 aa11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 SEMA3BQ13214 749 aa11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 HNRNPA1L2Q32P51 320 aaKnown RBP11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 MAP7D1Q3KQU3 841 aa11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 PLK5Q496M5 336 aa11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 EFHC2Q5JST6 749 aa11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 C6orf118Q5T5N4 469 aa11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 LAIR1Q6GTX8 287 aa11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 ZNF783Q6ZMS7 281 aa11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 PRR23BQ6ZRT6 265 aa11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 TFAP2DQ7Z6R9 452 aa11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 KBTBD6Q86V97 674 aa11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 NLRP14Q86W24 1093 aa11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 FAM160A2Q8N612 972 aaPredicted RBP11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 FRMD1Q8N878 549 aa11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 RUBCNQ92622 972 aa11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 ERLEC1Q96DZ1 483 aa11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 DUSP15Q9H1R2 295 aaPredicted RBP11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 DEF6Q9H4E7 631 aa11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 PRDM16Q9HAZ2 1276 aa11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 TMEM248Q9NWD8 314 aa11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 PCSK1NQ9UHG2 260 aa11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 SMG5Q9UPR3 1016 aaKnown RBP11.45□□□□□ -0.58
SCARNA20-201ENST00000516768 GPR179Q6PRD1 2367 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 TTC34A8MYJ7 566 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 EIF3CLB5ME19 914 aaKnown RBP11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 MYO1FO00160 1098 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 LRCH4O75427 683 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 RETP07949 1114 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 RHOCP08134 193 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 H2AFZP0C0S5 128 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 KRT83P78385 493 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 LPAL2Q16609 132 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 BOLA3Q53S33 107 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 C9orf64Q5T6V5 341 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 RWDD4Q6NW29 188 aaKnown RBP11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 CYP4V2Q6ZWL3 525 aaPredicted RBP11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 H2AFVQ71UI9 128 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 C11orf74Q86VG3 221 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 PSTKQ8IV42 348 aaKnown RBP11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 ZNF366Q8N895 744 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 NIPA2Q8N8Q9 360 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 OR2T3Q8NH03 318 aa11.44□□□□□ -0.58
SCARNA20-201ENST00000516768 FRS2Q8WU20 508 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms