RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 TPSAB1Q15661 275 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 RAB30Q15771 203 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 PARP6Q2NL67 630 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 C5orf22Q49AR2 442 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 ALFQ53S48 1182 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 FAM133BQ5BKY9 247 aaKnown RBP7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 RABGAP1LQ5R372 815 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 ADGRF1Q5T601 910 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 FAXCQ5TGI0 409 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 AFMIDQ63HM1 303 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 TXNDC8Q6A555 127 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 ITPRIPL1Q6GPH6 555 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 TIGD7Q6NT04 549 aaPredicted RBP7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 GAREM2Q75VX8 874 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 PID1Q7Z2X4 250 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 RELL1Q8IUW5 271 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 PDIK1LQ8N165 341 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 ZNF567Q8N184 647 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 KRT222Q8N1A0 295 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 UMODL1-AS1Q8N2C9 162 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 ARL14EPQ8N8R7 260 aaPredicted RBP7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 MAB21L3Q8N8X9 362 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 LEMD2Q8NC56 503 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 DEPDC1BQ8WUY9 529 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 IGSF8Q969P0 613 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 SLC22A12Q96S37 553 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 CYP2S1Q96SQ9 504 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 VAT1Q99536 393 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 CEP41Q9BYV8 373 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 FRMD8Q9BZ67 464 aaPredicted RBP7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 SLC39A8Q9C0K1 460 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 LMAN2LQ9H0V9 348 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 SEMA4AQ9H3S1 761 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 RETREG1Q9H6L5 497 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 CERS4Q9HA82 394 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 ETNK1Q9HBU6 452 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 SAYSD1Q9NPB0 183 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 NDFIP2Q9NV92 336 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 DNAJC17Q9NVM6 304 aaKnown RBP7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 IGSF9Q9P2J2 1179 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 LSM7Q9UK45 103 aaKnown RBP7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 TRHDEQ9UKU6 1024 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 CPQQ9Y646 472 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 MIA3Q5JRA6 1907 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 NOTCH4Q99466 2003 aa7.83□□□□□ -1.16
SCARNA20.1-201ENST00000516009 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 ARHGAP42A6NI28 874 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 GOLGA6L10A6NI86 522 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 SPDYE4A6NLX3 237 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 RASA4BC9J798 803 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 ALOX15BO15296 676 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 RASA4O43374 803 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 MAFKO60675 156 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 RAMP2O60895 175 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 XYLBO75191 536 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 RFPL2O75678 378 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 ACSL3O95573 720 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 TTC4O95801 387 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 KLKB1P03952 638 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 NUDT17P0C025 328 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 DDX6P26196 483 aaKnown RBP eCLIP7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 OAS2P29728 719 aaKnown RBP7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 OR1E1P30953 314 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 SLC6A4P31645 630 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 PAPOLAP51003 745 aaKnown RBP7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 EPHA5P54756 1037 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 CDH4P55283 916 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 YBEYP58557 167 aaPredicted RBP7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 IFI35P80217 286 aaPredicted RBP7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 SLC7A9P82251 487 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 SARNPP82979 210 aaKnown RBP7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 CDK16Q00536 496 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 GAD2Q05329 585 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 PDIA2Q13087 525 aaKnown RBP7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 SLC29A2Q14542 456 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 KYNUQ16719 465 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 ANO4Q32M45 955 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 PARP15Q460N3 678 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 TEX44Q53QW1 395 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 CEP85LQ5SZL2 805 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 FAM182AQ5T1J6 154 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 SYCP2LQ5T4T6 812 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 COL13A1Q5TAT6 717 aaPredicted RBP7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 TTC39BQ5VTQ0 682 aaPredicted RBP7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 PPP2R2DQ66LE6 453 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 RFWD3Q6PCD5 774 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 CHST9Q7L1S5 443 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 CROCCP2Q86T23 111 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 CIR1Q86X95 450 aaPredicted RBP7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 ZNF354CQ86Y25 554 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 ZBED8Q8IZ13 594 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 CFAP52Q8N1V2 620 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 MCUQ8NE86 351 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 ARNTL2Q8WYA1 636 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 ZBTB9Q96C00 473 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 ZFRQ96KR1 1074 aaKnown RBP7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 C9orf72Q96LT7 481 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 TEKT5Q96M29 485 aa7.82□□□□□ -1.16
SCARNA20.1-201ENST00000516009 TTC25Q96NG3 672 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms