RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 STK19P49842 368 aaPredicted RBP10.77□□□□□ -0.69
HMGXB3-205ENST00000514469 MYL5Q02045 173 aa10.77□□□□□ -0.69
HMGXB3-205ENST00000514469 SULT2A1Q06520 285 aa10.77□□□□□ -0.69
HMGXB3-205ENST00000514469 SLC14A1Q13336 389 aa10.77□□□□□ -0.69
HMGXB3-205ENST00000514469 CST6Q15828 149 aa10.77□□□□□ -0.69
HMGXB3-205ENST00000514469 STX1AQ16623 288 aa10.77□□□□□ -0.69
HMGXB3-205ENST00000514469 SLC25A52Q3SY17 297 aa10.77□□□□□ -0.69
HMGXB3-205ENST00000514469 C2CD6Q53TS8 623 aa10.77□□□□□ -0.69
HMGXB3-205ENST00000514469 TRNP1Q6NT89 227 aa10.77□□□□□ -0.69
HMGXB3-205ENST00000514469 ARCQ7LC44 396 aa10.77□□□□□ -0.69
HMGXB3-205ENST00000514469 C14orf80Q86SX3 495 aa10.77□□□□□ -0.69
HMGXB3-205ENST00000514469 MSANTD4Q8NCY6 345 aa10.77□□□□□ -0.69
HMGXB3-205ENST00000514469 OR52K2Q8NGK3 314 aa10.77□□□□□ -0.69
HMGXB3-205ENST00000514469 FRS2Q8WU20 508 aa10.77□□□□□ -0.69
HMGXB3-205ENST00000514469 SLC20A1Q8WUM9 679 aa10.77□□□□□ -0.69
HMGXB3-205ENST00000514469 SNX19Q92543 992 aa10.77□□□□□ -0.69
HMGXB3-205ENST00000514469 PTPRN2Q92932 1015 aa10.77□□□□□ -0.69
HMGXB3-205ENST00000514469 BIRC7Q96CA5 298 aa10.77□□□□□ -0.69
HMGXB3-205ENST00000514469 RPL10LQ96L21 214 aaKnown RBP10.77□□□□□ -0.69
HMGXB3-205ENST00000514469 FAM129BQ96TA1 746 aa10.77□□□□□ -0.69
HMGXB3-205ENST00000514469 TBCBQ99426 244 aa10.77□□□□□ -0.69
HMGXB3-205ENST00000514469 TKTL2Q9H0I9 626 aa10.77□□□□□ -0.69
HMGXB3-205ENST00000514469 OSGEPQ9NPF4 335 aa10.77□□□□□ -0.69
HMGXB3-205ENST00000514469 FAM207AQ9NSI2 230 aaPredicted RBP10.77□□□□□ -0.69
HMGXB3-205ENST00000514469 TMEM51Q9NW97 253 aa10.77□□□□□ -0.69
HMGXB3-205ENST00000514469 ADAMTS1Q9UHI8 967 aa10.77□□□□□ -0.69
HMGXB3-205ENST00000514469 SLCO3A1Q9UIG8 710 aa10.77□□□□□ -0.69
HMGXB3-205ENST00000514469 TMEM59LQ9UK28 342 aa10.77□□□□□ -0.69
HMGXB3-205ENST00000514469 FZD4Q9ULV1 537 aa10.77□□□□□ -0.69
HMGXB3-205ENST00000514469 TBC1D30Q9Y2I9 924 aa10.77□□□□□ -0.69
HMGXB3-205ENST00000514469 OR51B4Q9Y5P0 310 aa10.77□□□□□ -0.69
HMGXB3-205ENST00000514469 CEP295Q9C0D2 2601 aa10.77□□□□□ -0.69
HMGXB3-205ENST00000514469 A0A1W2PP55 124 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 FAM170AA1A519 330 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 LGALS16A8MUM7 142 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 GOLGA6L22H0YM25 854 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 GFPT2O94808 682 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 MBD3O95983 291 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 ADH1BP00325 375 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 F9P00740 461 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 CYP1A1P04798 512 aaPredicted RBP10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 IGHV4-34P06331 123 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 ZNF883P0CG24 379 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 CD27P26842 260 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 SOX5P35711 763 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 GRIA4P48058 902 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 NUMBP49757 651 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 AFF3P51826 1226 aaKnown RBP10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 COPB1P53618 953 aaKnown RBP10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 CDH4P55283 916 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 RNASE9P60153 205 aaKnown RBP10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 POLR2FP61218 127 aaKnown RBP10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 FMO1Q01740 532 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 CDR2Q01850 454 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 DEUP1Q05D60 604 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 SFSWAPQ12872 951 aaKnown RBP10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 ELAVL3Q14576 367 aaKnown RBP10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 FKBP15Q5T1M5 1219 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 ARTNQ5T4W7 220 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 ACBD5Q5T8D3 534 aaPredicted RBP10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 NAA35Q5VZE5 725 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 SASS6Q6UVJ0 657 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 IL27RAQ6UWB1 636 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 SND1Q7KZF4 910 aaKnown RBP eCLIP10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 MMAAQ8IVH4 418 aaKnown RBP10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 STK40Q8N2I9 435 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 CPA5Q8WXQ8 436 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 FAM131CQ96AQ9 280 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 ORAI3Q9BRQ5 295 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 FEM1AQ9BSK4 669 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 WDCPQ9H6R7 721 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 TM9SF3Q9HD45 589 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 ANO10Q9NW15 660 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 FBXL12Q9NXK8 326 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 LIMA1Q9UHB6 759 aaKnown RBP10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 NCKAP1Q9Y2A7 1128 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 PAXBP1Q9Y5B6 917 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 ADAMTS9Q9P2N4 1935 aa10.76□□□□□ -0.69
HMGXB3-205ENST00000514469 SPTBN2O15020 2390 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 IGLV3-10A0A075B6K4 115 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 DRGXA6NNA5 263 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 GOLGA8SH3BPF8 625 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 ATP9BO43861 1147 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 RNASEH2AO75792 299 aaKnown RBP10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 CNTN5O94779 1100 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 FSBPO95073 299 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 CER1O95813 267 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 VAV1P15498 845 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 ZNF18P17022 549 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 CHRNB2P17787 502 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 MMP8P22894 467 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 SLC8A1P32418 973 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 RDXP35241 583 aaKnown RBP10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 PSMD8P48556 350 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 FOXC1Q12948 553 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 ZNF177Q13360 481 aaPredicted RBP10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 HNRNPDQ14103 355 aaKnown RBP10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 NCAPHQ15003 741 aa10.75□□□□□ -0.69
HMGXB3-205ENST00000514469 SYCP1Q15431 976 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms