RNA–Protein interactions for RNA: ENST00000513957.1

NEDD4-210, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 2

Gene NEDD4, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-210ENST00000513957 FAM228BP0C875 321 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 SKILP12757 684 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 TFE3P19532 575 aaPredicted RBP8.43□□□□□ -1.06
NEDD4-210ENST00000513957 ADRA1BP35368 520 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 NNMTP40261 264 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 SGSHP51688 502 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 ST8SIA6P61647 398 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 RPL7AP62424 266 aaKnown RBP8.43□□□□□ -1.06
NEDD4-210ENST00000513957 LMAN2Q12907 356 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 TBX2Q13207 712 aaPredicted RBP8.43□□□□□ -1.06
NEDD4-210ENST00000513957 ZNF177Q13360 481 aaPredicted RBP8.43□□□□□ -1.06
NEDD4-210ENST00000513957 PIGHQ14442 188 aaPredicted RBP8.43□□□□□ -1.06
NEDD4-210ENST00000513957 CDO1Q16878 200 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 PLEKHG6Q3KR16 790 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 EFHC2Q5JST6 749 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 SPDYCQ5MJ68 293 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 MANEALQ5VSG8 457 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 EGFLAMQ63HQ2 1017 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 MBLAC2Q68D91 279 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 TMC6Q7Z403 805 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 SLFN11Q7Z7L1 901 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 ADIPOR2Q86V24 386 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 CCAR2Q8N163 923 aaKnown RBP8.43□□□□□ -1.06
NEDD4-210ENST00000513957 CARNMT1Q8N4J0 409 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 NIPA2Q8N8Q9 360 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 GAB3Q8WWW8 586 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 TTC17Q96AE7 1141 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 P2RY11Q96G91 374 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 LOXL4Q96JB6 756 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 SPACA7Q96KW9 195 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 CIPCQ9C0C6 399 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 ZYG11BQ9C0D3 744 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 DEF6Q9H4E7 631 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 TAS2R14Q9NYV8 317 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 UVRAGQ9P2Y5 699 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 FKBPLQ9UIM3 349 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 RAB23Q9ULC3 237 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 VANGL2Q9ULK5 521 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 NENFQ9UMX5 172 aa8.43□□□□□ -1.06
NEDD4-210ENST00000513957 THADAQ6YHU6 1953 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 A0A1W2PQF6 199 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 TMEM191CA6NGB0 347 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 TMCO5BA8MYB1 307 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 TRIM24O15164 1050 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 FGF10O15520 208 aaPredicted RBP8.42□□□□□ -1.06
NEDD4-210ENST00000513957 CCP110O43303 1012 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 SYNCRIPO60506 623 aaKnown RBP8.42□□□□□ -1.06
NEDD4-210ENST00000513957 FOXD2O60548 495 aaPredicted RBP8.42□□□□□ -1.06
NEDD4-210ENST00000513957 LRP3O75074 770 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 RPP40O75818 363 aaKnown RBP8.42□□□□□ -1.06
NEDD4-210ENST00000513957 CYP1A2P05177 515 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 H2AFZP0C0S5 128 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 PSMA2P25787 234 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 HOXC13P31276 330 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 L1CAMP32004 1257 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 CD70P32970 193 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 PCK1P35558 622 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 DPP6P42658 865 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 IL12RB1P42701 662 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 MAPKAPK2P49137 400 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 ZNF75DP51815 510 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 KRT83P78385 493 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 ZBTB16Q05516 673 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 SFSWAPQ12872 951 aaKnown RBP8.42□□□□□ -1.06
NEDD4-210ENST00000513957 ZNF211Q13398 564 aaPredicted RBP8.42□□□□□ -1.06
NEDD4-210ENST00000513957 ZNF234Q14588 700 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 C15orf59Q2T9L4 293 aaPredicted RBP8.42□□□□□ -1.06
NEDD4-210ENST00000513957 ASTE1Q2TB18 679 aaPredicted RBP8.42□□□□□ -1.06
NEDD4-210ENST00000513957 FUT11Q495W5 492 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 USP39Q53GS9 565 aaKnown RBP8.42□□□□□ -1.06
NEDD4-210ENST00000513957 PITRM1Q5JRX3 1037 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 CCDC122Q5T0U0 273 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 RNF219Q5W0B1 726 aaPredicted RBP8.42□□□□□ -1.06
NEDD4-210ENST00000513957 TMEM215Q68D42 235 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 CXorf57Q6NSI4 855 aaKnown RBP8.42□□□□□ -1.06
NEDD4-210ENST00000513957 TSSK4Q6SA08 328 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 SERPINA13PQ6UXR4 307 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 H2AFVQ71UI9 128 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 SFTPA1Q8IWL2 248 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 CCDC170Q8IYT3 715 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 ZNF683Q8IZ20 524 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 CFAP52Q8N1V2 620 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 DCAF4L2Q8NA75 395 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 PLPP7Q8NBV4 271 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 MDGA1Q8NFP4 955 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 WFDC5Q8TCV5 224 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 CTNNBL1Q8WYA6 563 aaPredicted RBP8.42□□□□□ -1.06
NEDD4-210ENST00000513957 TBC1D31Q96DN5 1066 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 ZC3H10Q96K80 434 aaKnown RBP8.42□□□□□ -1.06
NEDD4-210ENST00000513957 CCDC42Q96M95 316 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 HHIPQ96QV1 700 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 C2orf49Q9BVC5 232 aaPredicted RBP8.42□□□□□ -1.06
NEDD4-210ENST00000513957 SIK2Q9H0K1 926 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 RBSNQ9H1K0 784 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 TMEM245Q9H330 911 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 CD248Q9HCU0 757 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 LUC7LQ9NQ29 371 aaKnown RBP8.42□□□□□ -1.06
NEDD4-210ENST00000513957 DNAAF2Q9NVR5 837 aaKnown RBP8.42□□□□□ -1.06
NEDD4-210ENST00000513957 STIM2Q9P246 746 aa8.42□□□□□ -1.06
NEDD4-210ENST00000513957 OR12D3Q9UGF7 316 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms