RNA–Protein interactions for RNA: ENST00000512707.1

PFDN1-204, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 798 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-204ENST00000512707 CCDC105Q8IYK2 499 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 ZNF683Q8IZ20 524 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 CFAP52Q8N1V2 620 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 UMODL1-AS1Q8N2C9 162 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 CARNMT1Q8N4J0 409 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 ATPAF2Q8N5M1 289 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 C12orf50Q8NA57 414 aaPredicted RBP11.15□□□□□ -0.62
PFDN1-204ENST00000512707 CCNYQ8ND76 341 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 ACTL9Q8TC94 416 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 NSMCE1Q8WV22 266 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 IRF7Q92985 503 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 NXPE3Q969Y0 559 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 CCDC114Q96M63 670 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 PRICKLE1Q96MT3 831 aaPredicted RBP11.15□□□□□ -0.62
PFDN1-204ENST00000512707 KXD1Q9BQD3 176 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 TRMT61BQ9BVS5 477 aaKnown RBP11.15□□□□□ -0.62
PFDN1-204ENST00000512707 BBS2Q9BXC9 721 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 HAUS2Q9NVX0 235 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 SMARCAL1Q9NZC9 954 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 HPCAL4Q9UM19 191 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 ZNF148Q9UQR1 794 aa11.15□□□□□ -0.62
PFDN1-204ENST00000512707 TCRBV7S2A1N4TA0A589 114 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 ILVBLA1L0T0 632 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 NEDD8-MDP1E9PL57 170 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 DFFAO00273 331 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 PDE2AO00408 941 aaPredicted RBP11.14□□□□□ -0.63
PFDN1-204ENST00000512707 LIASO43766 372 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 MFSD11O43934 449 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 NEBLO76041 1014 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 CNTN5O94779 1100 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 LUC7L3O95232 432 aaKnown RBP11.14□□□□□ -0.63
PFDN1-204ENST00000512707 RBP3P10745 1247 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 ADH5P11766 374 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 BMP1P13497 986 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 FCARP24071 287 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 ACTN2P35609 894 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 GBE1Q04446 702 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 GAD2Q05329 585 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 ADCY2Q08462 1091 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 C2orf54Q08AI8 447 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 FCHO2Q0JRZ9 810 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 SNX1Q13596 522 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 SLC12A1Q13621 1099 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 POLD3Q15054 466 aaPredicted RBP11.14□□□□□ -0.63
PFDN1-204ENST00000512707 SMAD2Q15796 467 aaKnown RBP11.14□□□□□ -0.63
PFDN1-204ENST00000512707 CYP1B1Q16678 543 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 PREPLQ4J6C6 727 aaPredicted RBP11.14□□□□□ -0.63
PFDN1-204ENST00000512707 ALFQ53S48 1182 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 TANGO2Q6ICL3 276 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 PTCRAQ6ISU1 281 aaPredicted RBP11.14□□□□□ -0.63
PFDN1-204ENST00000512707 TIGD7Q6NT04 549 aaPredicted RBP11.14□□□□□ -0.63
PFDN1-204ENST00000512707 C8orf74Q6P047 294 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 DRICH1Q6PGQ1 229 aaPredicted RBP11.14□□□□□ -0.63
PFDN1-204ENST00000512707 DARS2Q6PI48 645 aaKnown RBP11.14□□□□□ -0.63
PFDN1-204ENST00000512707 CCDC137Q6PK04 289 aaKnown RBP11.14□□□□□ -0.63
PFDN1-204ENST00000512707 MAATS1Q7Z4T9 603 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 ZC3H18Q86VM9 953 aaKnown RBP11.14□□□□□ -0.63
PFDN1-204ENST00000512707 CIR1Q86X95 450 aaPredicted RBP11.14□□□□□ -0.63
PFDN1-204ENST00000512707 KLHL7Q8IXQ5 586 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 PRELID2Q8N945 189 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 TFB1MQ8WVM0 346 aaKnown RBP11.14□□□□□ -0.63
PFDN1-204ENST00000512707 C1orf54Q8WWF1 131 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 RSAD2Q8WXG1 361 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 NKD2Q969F2 451 aaPredicted RBP11.14□□□□□ -0.63
PFDN1-204ENST00000512707 XPO6Q96QU8 1125 aaKnown RBP11.14□□□□□ -0.63
PFDN1-204ENST00000512707 HERPUD2Q9BSE4 406 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 SLC2A11Q9BYW1 496 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 MUC3BQ9H195 1237 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 MAGEH1Q9H213 219 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 LRRC19Q9H756 370 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 RBM12Q9NTZ6 932 aaKnown RBP11.14□□□□□ -0.63
PFDN1-204ENST00000512707 ETNK2Q9NVF9 386 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 DTLQ9NZJ0 730 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 MARK1Q9P0L2 795 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 NEU3Q9UQ49 428 aa11.14□□□□□ -0.63
PFDN1-204ENST00000512707 DENND4AQ7Z401 1863 aa11.13□□□□□ -0.63
PFDN1-204ENST00000512707 CHADO15335 359 aa11.13□□□□□ -0.63
PFDN1-204ENST00000512707 ECEL1O95672 775 aa11.13□□□□□ -0.63
PFDN1-204ENST00000512707 PENKP01210 267 aaPredicted RBP11.13□□□□□ -0.63
PFDN1-204ENST00000512707 ITGAVP06756 1048 aa11.13□□□□□ -0.63
PFDN1-204ENST00000512707 TYRP14679 529 aa11.13□□□□□ -0.63
PFDN1-204ENST00000512707 PECAM1P16284 738 aaPredicted RBP11.13□□□□□ -0.63
PFDN1-204ENST00000512707 SP100P23497 879 aaPredicted RBP11.13□□□□□ -0.63
PFDN1-204ENST00000512707 COILP38432 576 aaPredicted RBP11.13□□□□□ -0.63
PFDN1-204ENST00000512707 CLCN6P51797 869 aa11.13□□□□□ -0.63
PFDN1-204ENST00000512707 DR1Q01658 176 aa11.13□□□□□ -0.63
PFDN1-204ENST00000512707 GNA12Q03113 381 aa11.13□□□□□ -0.63
PFDN1-204ENST00000512707 ZNF33AQ06730 810 aa11.13□□□□□ -0.63
PFDN1-204ENST00000512707 GALNT2Q10471 571 aa11.13□□□□□ -0.63
PFDN1-204ENST00000512707 HTR4Q13639 388 aa11.13□□□□□ -0.63
PFDN1-204ENST00000512707 DHX34Q14147 1143 aaKnown RBP11.13□□□□□ -0.63
PFDN1-204ENST00000512707 EML3Q32P44 896 aa11.13□□□□□ -0.63
PFDN1-204ENST00000512707 GLE1Q53GS7 698 aaKnown RBP11.13□□□□□ -0.63
PFDN1-204ENST00000512707 SLC45A4Q5BKX6 768 aa11.13□□□□□ -0.63
PFDN1-204ENST00000512707 LY6G5CQ5SRR4 150 aa11.13□□□□□ -0.63
PFDN1-204ENST00000512707 HEATR6Q6AI08 1181 aaKnown RBP11.13□□□□□ -0.63
PFDN1-204ENST00000512707 PARM1Q6UWI2 310 aa11.13□□□□□ -0.63
PFDN1-204ENST00000512707 VITQ6UXI7 678 aa11.13□□□□□ -0.63
PFDN1-204ENST00000512707 NPNTQ6UXI9 565 aa11.13□□□□□ -0.63
PFDN1-204ENST00000512707 SYDE1Q6ZW31 735 aaPredicted RBP11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms